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Content-Language: en-US, de-DE, nl To: Vagrant Cascadian <vagrant@HIDDEN>, 69514 <at> debbugs.gnu.org References: <87wmqkpcuq.fsf@HIDDEN> <87h6hfj44l.fsf@contorta> From: Troy Figiel <troy@HIDDEN> Autocrypt: addr=troy@HIDDEN; keydata= xsFNBGKp71YBEADDmh9HMTg0Z8/xxf4yT6UX2wO8u0Q2nbOAhzROSabUVyBp8Gz6jLcoFN8x rg8XxxBWTCENBWqKkYG6Z/GgPmeKuacAeZIW7dGYaGu4bZHgLsTqk04J/dM63aVveJJY4M4r KNx0Mew+SYTGrh3NnoSF0+ZIskGGh4NJpXOGUSUihjdddn8ouFDDy01GJ9N2ZWprfWo3ynMA xEHhD6CWniQMkmd+TVKjQt+BC8d+nHlOt6vFoDGH9PehXmmBLyOJAVMAlPMyrN8ZjmbRp91s 4Sz2rqjD2GXFGvKClhyxcr2qEUJmCg/Vp8PiZWOwxA/6BCWuNmrl1d1FhXjMMIzz2y92MOlD 5kQm7/261cuXTJvKZOLmHelY0m7gReWnc9peGPmGeukkdblmjwJTnetzvF/AUXNpS29Nmyie 4PgsAbkmL0PwKCbf+6WRWywRidR1narANINGJHL8MDIgdUwuJsYhD5s10bIsg2dOOxFioOnm kgpWiVLmZSq9bkX+SRyWNL+hDhEbGLnZ5WUOszPXgo9Lo2dCGBr4YkCaxVCCCfgAn8TpgcLQ VW37N75MjEX3kVBGBiiifbQUedKHqMddlUEYLSjpBCNxqF1X5fTuurFrfq8EYcYcQGW5Telh fX1I6md7xt0FDBRAVx8jAvy7Rkt6CeKP7oPNMVfoQ62oMT85JQARAQABzSFUcm95IEZpZ2ll bCA8dHJveUB0cm95ZmlnaWVsLmNvbT7CwY8EEwEKADkCGwMECwkIBwQVCgkIBRYCAwEAAh4F AheAFiEE5HwNzSdo36E4/NzWxnyRgbOJP7AFAmVCwP8CGQEACgkQxnyRgbOJP7DK/A/+L6IY xHhr4ZCz5Mk8s0OHAQTP3ZlAtmjMB+Lg0nwg8hVRzF1O/mCQKaFeKwKgh0I0zZIYucnylG6K KtVoa1ZNrpOCO2Qau7C/j6u7lmZGoEyEf9ePvhpVPcqFXSeehNl/nmaAFuLXTTTvkUubuU2m OEQe1oua/9HQPbd2mlKNjUnj9YmYs9qqF9bcJmT0U2WUg4Jz3DmHQiK175QqJv7fXtIdHzAk BRlJdrslLPOrIDb7WAnXpUQs1bcirKuSFOsyeGn0plh3t0uSm8d3BValRArPMw/h9FldGRXr KycSCIuU/vL94mncXSwIy8ifY4XkcBVvuZ8CbAh3G3iuZ6LLoMsjGmCXkm6Ru9OieC8xmAae 69RYw/zXHoIkW+/nLygEv7+7tMrYTFcUR0RmMvHjiZafnGwHkBCFMojUapcG/EAsSYQzssGP qYLuqIaq2weCYpfNUMDye3rivOKFcO6Aa63lCb1TLy/OVoK0al04WdO+teDJVj88WNyMZu1c SdBYd3lJ9VLSmsBJ0FFksuDyXQqmrN+Uckka+JdKHiADGGaztMHmbJkZ1DZ2jfEh0kJTcCr8 PAXIvTMcgi/BLP3R6u+iHnycypID8pwLIDg3Gg3cLcfeBmCBEAft/Gk5RF0POIL8QAx7IVwu AD4kpM6fkXc6Dq9sl6us38ekm6M7fprOwU0EYqnvVgEQANU4cn+tMmYLMMJA3yeE7JIlY5E+ xZ5qrvNA+UwqTuZGcQH3Th81fsF1qYYiT38fq6GAEImJ19VqVs9f/YGSdkUk1ZA46AwzPuij pFGUm3yL71kCzPblF1zUCzOllc1N7pi3YD+XQr7ggqX/s/MS1uxR9Sgs5coYUT0ygXVOGkSk OQjdQ99B2+BUTos28C2sDfJfCd5ekLCp02EUle527sX8QjyTiTUlu5pvFnCtzO6MWf3loiJb Vi9vA0hQFOnu4jM0TjzIc4vWJpX1oExfFwEsoSVLDQh3CFIoe8wHsRgpIvtWiiRIuaaJawhx ac6mj4yaB2UR/MW8KFpUmqzTgVn8FLt0S0yo1PpleTFT8IsGY8luoyWIaUyNCrjXxrps8yFj HoE54Abb0S6Z15Ko2csG2DR1u4ZtELVsHcF3gZT5q1Nt9BnV8TYi0+vNjVjQ7OODQMOBSIB8 bBEQogtbTxBYvIs57ClYAd0fHssz7fJHaKDbcsZXGWKdiSEQrrfc78tOgmYml997og7SyLg+ YI9X8G4RJiIF9EThRtAKK92i9xktWLLBCl5q5nwRPcObVgy7AiwQBPX1WVR3+Uy6BaeyylPY YIAyM6dHwl4/e5HczR5Nt6pzmnOza8F2JT4blqJd+QVeL+xDtBvzKWLBVZkPJMbwqYS/1MOu 4UdmuNIpABEBAAHCwXYEGAEKACAWIQTkfA3NJ2jfoTj83NbGfJGBs4k/sAUCYqnvVgIbDAAK CRDGfJGBs4k/sAQUD/4xIZxwGDsBc3mf4qnahCEAN3NjyhI/9q2oFGzyN0t9ifh7u7HD5R0F 5WdI2JnOnW3Bjl3YnsMfLg9wHnsT3R1xresf59wXuKQ7UIpqPfMXLZnHtaUP5bmpETvkvybN f0zkekbU27chbmiAOyDB3ApsFQ7lqwvOO0K3+sx94ROsJwb+MDpjGAOewVPk7V0br0twFo2R 5/vtp8cNCg/lKlqWDmJ0fWipxazSzVAMDxn+ci0DB5o5UyHhxc8WgXXLl7t22m7b6kVZ0EKN oEPa7/TvIj1wVDFUFrEMEuJFBMDqZDLdBMZzEsq7O0sHaGifiy0zHRE7Eyfo+9sV0ccSWdeE f5GjoKLtR7MlJ+I9IfHuCl++Gxa+MM8yXfn/tk7vcsGJhewrqqTlvnpMuITCmdTJymgnKS/B jSDDKjgRsZLLzhkE+dVTBZRkHFOGf9rV8+JQRYwqZVIjIEln6EZdfOQIKPll4EY19f9stj7h ptM9jXDTBm4MBxdCdWIRsU19w4TqvitioADjMSZ1MYqQlS6pWQI9tDMJ/mLqKcWrHhar6rwv v/gTpsbePtVR2GkWMjEHE1VS1LKmr+UcWFu3MJIHMd4DFnypp1n1cY+u0emp93JUMDMqa79F G+6Sbeaw5G+/fx8S4hpw63SiA1x8c5PMjKGwx5G4ZZfNwT+mAi6dHA== In-Reply-To: <87h6hfj44l.fsf@contorta> Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Rspamd-Queue-Id: 4TsGwD4zzbz9sSZ X-Spam-Score: -0.7 (/) X-Debbugs-Envelope-To: 69514 X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.7 (-) Hi vagrant, On 2024-03-09 07:44, Vagrant Cascadian wrote: > Any compelling reason why the test removal should be moved from a > snippet to a phase? The documentation admits to this being an elusive > distinction, not really clearing things up much: > I read the following as stating we should keep any source code that could be used to build the package on different systems, including tests that could be run on other systems: --8<---------------cut here---------------start------------->8--- The source derived from an origin should produce a source that can be used to build the package on any system that the upstream package supports (i.e., act as the corresponding source). --8<---------------cut here---------------end--------------->8--- Other than that, no reason and either would be fine in my opinion. The current documentation is more confusing rather than enlightening in this case. Best wishes, Troy
guix-patches@HIDDEN:bug#69514; Package guix-patches.
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From: Vagrant Cascadian <vagrant@HIDDEN>
To: Troy Figiel <troy@HIDDEN>, 69514 <at> debbugs.gnu.org
Subject: Re: [bug#69514] [PATCH] gnu: python-pandera: Update to 0.18.0.
In-Reply-To: <87wmqkpcuq.fsf@HIDDEN>
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Date: Fri, 08 Mar 2024 22:44:42 -0800
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Content-Type: text/plain
On 2024-03-02, Troy Figiel wrote:
> diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
> index b6a116f16b..93b5c5c91d 100644
> --- a/gnu/packages/python-science.scm
> +++ b/gnu/packages/python-science.scm
...
> @@ -836,14 +836,7 @@ (define-public python-pandera
> (commit (string-append "v" version))))
> (file-name (git-file-name name version))
> (sha256
> - (base32 "1mnqk583z90k1n0z3lfa4rd0ng40v7hqfk7phz5gjmxlzfjbxa1x"))
> - (modules '((guix build utils)))
> - ;; These tests require PySpark and Modin. We need to remove the entire
> - ;; directory, since the conftest.py in these directories contain
> - ;; imports. (See: https://github.com/pytest-dev/pytest/issues/7452)
> - (snippet '(begin
> - (delete-file-recursively "tests/pyspark")
> - (delete-file-recursively "tests/modin")))))
> + (base32 "14b5aij5zjkwvsimg0v00qvp59mhhq7ljim4qghcn432vkg9gh47"))))
> (build-system pyproject-build-system)
> (arguments
> (list
> @@ -854,7 +847,16 @@ (define-public python-pandera
> ;; positives. These tests currently fail.
> "not test_python_std_list_dict_generics"
> " and not test_python_std_list_dict_empty_and_none"
> - " and not test_pandas_modules_importable"))))
> + " and not test_pandas_modules_importable"))
> + #:phases #~(modify-phases %standard-phases
> + (add-before 'check 'fix-tests
> + (lambda _
> + ;; These tests require PySpark and Modin. We need to
> + ;; remove the entire directory, since the conftest.py
> + ;; in these directories contain imports. (See:
> + ;; https://github.com/pytest-dev/pytest/issues/7452)
> + (for-each delete-file-recursively
> + '("tests/pyspark" "tests/modin")))))))
> ;; Pandera comes with a lot of extras. We test as many as possible, but do
> ;; not include all of them in the propagated-inputs. Currently, we have to
> ;; skip the pyspark and io tests due to missing packages python-pyspark
Any compelling reason why the test removal should be moved from a
snippet to a phase? The documentation admits to this being an elusive
distinction, not really clearing things up much:
https://guix.gnu.org/en/manual/devel/en/guix.html#Snippets-versus-Phases
Other than that, this looks like a trivial version bump. :)
Builds fine, no dependents...
live well,
vagrant
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To: guix-patches@HIDDEN
Subject: [PATCH] gnu: python-pandera: Update to 0.18.0.
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* gnu/packages/python-science.scm (python-pandera): Update to 0.18.0.
[source]: Remove snippet.
[arguments]<#:phases>: Add 'fix-tests phase.
---
gnu/packages/python-science.scm | 22 ++++++++++++----------
1 file changed, 12 insertions(+), 10 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index b6a116f16b..93b5c5c91d 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -826,7 +826,7 @@ (define-public python-pandarallel
(define-public python-pandera
(package
(name "python-pandera")
- (version "0.17.2")
+ (version "0.18.0")
(source
(origin
;; No tests in the PyPI tarball.
@@ -836,14 +836,7 @@ (define-public python-pandera
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "1mnqk583z90k1n0z3lfa4rd0ng40v7hqfk7phz5gjmxlzfjbxa1x"))
- (modules '((guix build utils)))
- ;; These tests require PySpark and Modin. We need to remove the entire
- ;; directory, since the conftest.py in these directories contain
- ;; imports. (See: https://github.com/pytest-dev/pytest/issues/7452)
- (snippet '(begin
- (delete-file-recursively "tests/pyspark")
- (delete-file-recursively "tests/modin")))))
+ (base32 "14b5aij5zjkwvsimg0v00qvp59mhhq7ljim4qghcn432vkg9gh47"))))
(build-system pyproject-build-system)
(arguments
(list
@@ -854,7 +847,16 @@ (define-public python-pandera
;; positives. These tests currently fail.
"not test_python_std_list_dict_generics"
" and not test_python_std_list_dict_empty_and_none"
- " and not test_pandas_modules_importable"))))
+ " and not test_pandas_modules_importable"))
+ #:phases #~(modify-phases %standard-phases
+ (add-before 'check 'fix-tests
+ (lambda _
+ ;; These tests require PySpark and Modin. We need to
+ ;; remove the entire directory, since the conftest.py
+ ;; in these directories contain imports. (See:
+ ;; https://github.com/pytest-dev/pytest/issues/7452)
+ (for-each delete-file-recursively
+ '("tests/pyspark" "tests/modin")))))))
;; Pandera comes with a lot of extras. We test as many as possible, but do
;; not include all of them in the propagated-inputs. Currently, we have to
;; skip the pyspark and io tests due to missing packages python-pyspark
base-commit: 6f5ea7ac1acb3d1c53baf7620cca66cc87fe5a73
--
2.42.0
Troy Figiel <troy@HIDDEN>:guix-patches@HIDDEN.
Full text available.guix-patches@HIDDEN:bug#69514; Package guix-patches.
Full text available.
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