Assaf Gordon <assafgordon@HIDDEN>
to control <at> debbugs.gnu.org
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Full text available.Bob Proulx <bob@HIDDEN>
to control <at> debbugs.gnu.org
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Full text available.Bob Proulx <bob@HIDDEN>
to control <at> debbugs.gnu.org
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Full text available.Received: (at 14158) by debbugs.gnu.org; 8 Apr 2013 20:01:48 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Mon Apr 08 16:01:48 2013 Received: from localhost ([127.0.0.1]:40509 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.72) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1UPIGC-00011i-BP for submit <at> debbugs.gnu.org; Mon, 08 Apr 2013 16:01:48 -0400 Received: from joseki.proulx.com ([216.17.153.58]:33928) by debbugs.gnu.org with esmtp (Exim 4.72) (envelope-from <bob@HIDDEN>) id 1UPIG9-00011Z-RI for 14158 <at> debbugs.gnu.org; Mon, 08 Apr 2013 16:01:47 -0400 Received: from hysteria.proulx.com (hysteria.proulx.com [192.168.230.119]) by joseki.proulx.com (Postfix) with ESMTP id 3AA3F211E3 for <14158 <at> debbugs.gnu.org>; Mon, 8 Apr 2013 13:58:10 -0600 (MDT) Received: by hysteria.proulx.com (Postfix, from userid 1000) id 132882DC8E; Mon, 8 Apr 2013 13:58:08 -0600 (MDT) Date: Mon, 8 Apr 2013 13:58:08 -0600 From: Bob Proulx <bob@HIDDEN> To: 14158 <at> debbugs.gnu.org Subject: tag and classify Message-ID: <20130408195808.GA31673@HIDDEN> MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline User-Agent: Mutt/1.5.21 (2010-09-15) X-Spam-Score: -1.6 (-) X-Debbugs-Envelope-To: 14158 X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.13 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <http://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <http://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <http://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Sender: debbugs-submit-bounces <at> debbugs.gnu.org Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org X-Spam-Score: -2.9 (--) severity 14158 wishlist tag 14158 + confirmed thanks
bug-coreutils@HIDDEN
:bug#14158
; Package coreutils
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Full text available.Received: (at submit) by debbugs.gnu.org; 8 Apr 2013 07:38:18 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Mon Apr 08 03:38:18 2013 Received: from localhost ([127.0.0.1]:39376 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.72) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1UP6ef-0006YY-SH for submit <at> debbugs.gnu.org; Mon, 08 Apr 2013 03:38:18 -0400 Received: from eggs.gnu.org ([208.118.235.92]:57367) by debbugs.gnu.org with esmtp (Exim 4.72) (envelope-from <ole.tange@HIDDEN>) id 1UP6Ww-0005uc-Lm for submit <at> debbugs.gnu.org; Mon, 08 Apr 2013 03:30:20 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from <ole.tange@HIDDEN>) id 1UP6TS-0007Gv-1n for submit <at> debbugs.gnu.org; Mon, 08 Apr 2013 03:26:47 -0400 X-Spam-Checker-Version: SpamAssassin 3.3.2 (2011-06-06) on eggs.gnu.org X-Spam-Level: X-Spam-Status: No, score=-100.5 required=5.0 tests=BAYES_05,FREEMAIL_FROM, T_DKIM_INVALID,USER_IN_WHITELIST autolearn=disabled version=3.3.2 Received: from lists.gnu.org ([208.118.235.17]:60674) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from <ole.tange@HIDDEN>) id 1UP6TR-0007Gr-Tl for submit <at> debbugs.gnu.org; Mon, 08 Apr 2013 03:26:41 -0400 Received: from eggs.gnu.org ([208.118.235.92]:40389) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from <ole.tange@HIDDEN>) id 1UP6TL-000182-0U for bug-coreutils@HIDDEN; Mon, 08 Apr 2013 03:26:41 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from <ole.tange@HIDDEN>) id 1UP6TC-0007BO-0v for bug-coreutils@HIDDEN; Mon, 08 Apr 2013 03:26:34 -0400 Received: from mail-bk0-x229.google.com ([2a00:1450:4008:c01::229]:39111) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from <ole.tange@HIDDEN>) id 1UP6TB-0007B0-O2 for bug-coreutils@HIDDEN; Mon, 08 Apr 2013 03:26:25 -0400 Received: by mail-bk0-f41.google.com with SMTP id i18so2938896bkv.0 for <bug-coreutils@HIDDEN>; Mon, 08 Apr 2013 00:26:25 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=x-received:mime-version:sender:from:date:x-google-sender-auth :message-id:subject:to:content-type; bh=wGyYCppYe7QEzRTeqLOEJOyba6ZxtRDtl7OAhCelweA=; b=sh8iPBftTFo9SdKo4M6p1YjsvlzHZB+R0qI2XFH3rAgJzRHzhTWHCOTvX+aaVpRAlj cDz1dG4n4atCbVKeGxnyX5KQh1mt/S448+QjsR2hxiSc1b6M7PaOYCPUe6m3rdUbdbBT 1YyEy/E6AK9FW/vaOZUbj+6Q1X0jtv1kp39cs3tDUqN13CD0m1F+Uy2hUAALSKUSBWiR DqGHle5nHU2M02ssSqH8bx/S1/HKuQxtjfVK5ZNt6ASt9COfUOvXE1kLw4HHdW3j4rTW W/b1iSPF/fVgXlhuepazisKrUWiEYwSN/ny+FDBcQm0kPN7AnA1SvxzSrjUa35VrZSfE ArtA== X-Received: by 10.205.122.80 with SMTP id gf16mr10603083bkc.130.1365405984893; Mon, 08 Apr 2013 00:26:24 -0700 (PDT) MIME-Version: 1.0 Received: by 10.204.129.16 with HTTP; Mon, 8 Apr 2013 00:26:04 -0700 (PDT) From: Ole Tange <ole@HIDDEN> Date: Mon, 8 Apr 2013 09:26:04 +0200 X-Google-Sender-Auth: 44SF3057D1EKxX4IzSbhOazuPHo Message-ID: <CA+4vN7woWZBJ7aKHnxBADP=WjmMRJMn21sO1msadBwO+M3kWYg@HIDDEN> Subject: Base64 -d is slow To: bug-coreutils@HIDDEN Content-Type: text/plain; charset=ISO-8859-1 X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-detected-operating-system: by eggs.gnu.org: GNU/Linux 2.6.x X-Received-From: 208.118.235.17 X-Spam-Score: -3.4 (---) X-Debbugs-Envelope-To: submit X-Mailman-Approved-At: Mon, 08 Apr 2013 03:38:16 -0400 X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.13 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <http://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <http://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <http://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Sender: debbugs-submit-bounces <at> debbugs.gnu.org Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org X-Spam-Score: -6.1 (------) I was astonished to learn that: perl -MMIME::Base64 -e 'while(read(STDIN,$buf,770*50)){print decode_base64($buf)}' is faster than: base64 -d My C-skills are quite limited, but it seems the current implementation does a lot of computation and not table lookups. Below are my thoughts on how this could be improved. /Ole = Designing a fast Base64 decoder = By: Ole Tange <tange@HIDDEN> == Goal == We want something that is parallelizable since that can take advantage of: * Multiple cores/CPUs * Vector processing (MMX/SSE) * Processors with pipelines == Observations == In Base64 every 4 bytes represent 3 bytes of decoded information. Binary input: aaaaaaaa bbbbbbbb cccccccc dddddddd => Base64 index: 111111 222222 333333 444444 => Decoded: 11111122 22223333 33444444 Given input byte 1 and 2 we can determine output byte 1. Given input byte 2 and 3 we can determine output byte 2. Given input byte 3 and 4 we can determine output byte 3. A way to make an algorithm parallelizable is by not making computations based on previous results, but only base the computation on the input. == Idea == Make a lookup table for the output byte. By making a 16-bit lookup table for the first 2 bytes, the middle 2 bytes and the last 2 bytes, conversion of 4 byte to 3 bytes is fast and independent of previous computations. The lookup table can also deal with the conversion to Base64 index - thus skipping this step. It can even deal with all the non-conflicting variations of which char codes for index 62 and 63. out_byte1 = first[in_byte1][in_byte2]; out_byte2 = middle[in_byte2][in_byte3]; out_byte3 = last[in_byte3][in_byte4]; Each lookup table will at most be 64kbytes = 192kbytes total. == Implementation == Here is the implementation in pseudo code: byte compute_first_byte(int i, int j) { /* Return the decoded value of the first byte, given the first 2 bytes are i and j */ } byte compute_middle_byte(int i, int j) { /* Return the decoded value of the middle byte, given the middle 2 bytes are i and j */ } byte compute_last_byte(int i, int j) { /* Return the decoded value of the last byte, given the last 2 bytes are i and j */ } /* Lookup tables */ static byte first[256][256]; static byte middle[256][256]; static byte last[256][256]; static bool already_computed = 0; void decode(byte* in, int len, byte* out) { /* in = pointer to input bytes with no garbage (\n and similar) len = length of input (must in 4 byte blocks) out = pointer to output buffer of length 3/4*len */ /* Initialize lookup tables */ if(! already_computed) { parallel_for(int i = 0; i < 256; i++) { parallel_for(int j = 0; j < 256; j++) { first[i][j] = compute_first_byte(i,j); middle[i][j] = compute_middle_byte(i,j); last[i][j] = compute_last_byte(i,j); } } already_computed = 1; } /* Lookup byte1+2, byte2+3, byte3+4 */ parallel_for(out_idx = 0, in_idx = 0; in_idx < len; in_idx += 4, out_idx += 3) { out[out_idx] = first[ in[in_idx] ][ in[in_idx+1] ]; out[out_idx+1] = middle[ in[in_idx+1] ][ in[in_idx+2] ]; out[out_idx+2] = last[ in[in_idx+2] ][ in[in_idx+3] ]; } } == Improvement ideas == Use SIMD to do multiple 4-byte blocks in parallel - maybe a line at a time?
Ole Tange <ole@HIDDEN>
:bug-coreutils@HIDDEN
.
Full text available.bug-coreutils@HIDDEN
:bug#14158
; Package coreutils
.
Full text available.
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