GNU bug report logs - #34427
guile-bootstrap@2.2 segfault?

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Package: guix; Severity: important; Reported by: Efraim Flashner <efraim@HIDDEN>; dated Mon, 11 Feb 2019 09:13:01 UTC; Maintainer for guix is bug-guix@HIDDEN.
Severity set to 'important' from 'normal' Request was from Ludovic Courtès <ludo@HIDDEN> to control <at> debbugs.gnu.org. Full text available.

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From: =?utf-8?Q?Ludovic_Court=C3=A8s?= <ludo@HIDDEN>
To: Efraim Flashner <efraim@HIDDEN>
Subject: Re: [bug#34453] [PATCH] build guile-static with guile-2.0
References: <20190212091740.GB3284@macbook41>
Date: Sat, 16 Feb 2019 17:06:05 +0100
In-Reply-To: <20190212091740.GB3284@macbook41> (Efraim Flashner's message of
 "Tue, 12 Feb 2019 11:17:40 +0200")
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Hi Efraim,

Efraim Flashner <efraim@HIDDEN> skribis:

> When experimenting I found that using guile@HIDDEN as a base for
> guile-static, the resulting guile-static didn't segfault on the target
> architecture.

As discussed in <https://issues.guix.info/issue/34427>, I would rather
fix the segfault in 2.2 than move back to 2.0 and effectively delay the
problem.

Ludo=E2=80=99.




Information forwarded to bug-guix@HIDDEN:
bug#34427; Package guix. Full text available.

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From: Efraim Flashner <efraim@HIDDEN>
To: Ludovic =?utf-8?Q?Court=C3=A8s?= <ludo@HIDDEN>
Subject: Re: bug#34427: guile-bootstrap@HIDDEN segfault?
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On Tue, Feb 12, 2019 at 03:27:37PM +0100, Ludovic Court=C3=A8s wrote:
> Hello Efraim,
>=20
> Efraim Flashner <efraim@HIDDEN> skribis:
>=20
> > I'm testing %bootstrap-guile from bootstrap.scm and I'm getting a
> > segfault when runing guile --version. I've attached an strace of the
> > process.
>=20
> To be clear, I believe this is for a *cross-compiled* Guile, right?

That's right, %bootstrap-guile is extracted from $(guix build
--target=3Dpowerpc-linux-gnu bootstrap-tarballs)

>=20
> The natively-built binary on x86_64-linux works fine:
>=20
> --8<---------------cut here---------------start------------->8---
> $ unshare -mrf chroot $(guix build guile-static-stripped) ./bin/guile --v=
ersion
> guile: warning: failed to install locale
> GC Warning: pthread_getattr_np or pthread_attr_getstack failed for main t=
hread
> GC Warning: Couldn't read /proc/stat
> guile (GNU Guile) 2.2.4
> Copyright (C) 2018 Free Software Foundation, Inc.
>=20
> License LGPLv3+: GNU LGPL 3 or later <http://gnu.org/licenses/lgpl.html>.
> This is free software: you are free to change and redistribute it.
> There is NO WARRANTY, to the extent permitted by law.
> $ guix describe
> Generacio 61	Feb 12 2019 11:14:38	(nuna)
>   guix c86b5f1
>     repository URL: https://git.savannah.gnu.org/git/guix.git
>     branch: master
>     commit: c86b5f1b9bdfdd478ba15804f9343feb8d9c019b
> $ uname -m
> x86_64
> --8<---------------cut here---------------end--------------->8---
>=20
> Since I saw a build failure similar to the one you mention when
> cross-building for GNU/Hurd, I=E2=80=99m tempted to think this has to do =
with
> cross-compilation.
>=20
> Thanks,
> Ludo=E2=80=99.

I saw you mentioned that on IRC.

--=20
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Information forwarded to bug-guix@HIDDEN:
bug#34427; Package guix. Full text available.

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From: =?utf-8?Q?Ludovic_Court=C3=A8s?= <ludo@HIDDEN>
To: Efraim Flashner <efraim@HIDDEN>
Subject: Re: bug#34427: guile-bootstrap@HIDDEN segfault?
References: <20190211091136.GA3284@macbook41>
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Hello Efraim,

Efraim Flashner <efraim@HIDDEN> skribis:

> I'm testing %bootstrap-guile from bootstrap.scm and I'm getting a
> segfault when runing guile --version. I've attached an strace of the
> process.

To be clear, I believe this is for a *cross-compiled* Guile, right?

The natively-built binary on x86_64-linux works fine:

--8<---------------cut here---------------start------------->8---
$ unshare -mrf chroot $(guix build guile-static-stripped) ./bin/guile --ver=
sion
guile: warning: failed to install locale
GC Warning: pthread_getattr_np or pthread_attr_getstack failed for main thr=
ead
GC Warning: Couldn't read /proc/stat
guile (GNU Guile) 2.2.4
Copyright (C) 2018 Free Software Foundation, Inc.

License LGPLv3+: GNU LGPL 3 or later <http://gnu.org/licenses/lgpl.html>.
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
$ guix describe
Generacio 61	Feb 12 2019 11:14:38	(nuna)
  guix c86b5f1
    repository URL: https://git.savannah.gnu.org/git/guix.git
    branch: master
    commit: c86b5f1b9bdfdd478ba15804f9343feb8d9c019b
$ uname -m
x86_64
--8<---------------cut here---------------end--------------->8---

Since I saw a build failure similar to the one you mention when
cross-building for GNU/Hurd, I=E2=80=99m tempted to think this has to do wi=
th
cross-compilation.

Thanks,
Ludo=E2=80=99.




Information forwarded to bug-guix@HIDDEN:
bug#34427; Package guix. Full text available.

Message received at 34427 <at> debbugs.gnu.org:


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Date: Tue, 12 Feb 2019 11:17:40 +0200
From: Efraim Flashner <efraim@HIDDEN>
To: guix-patches@HIDDEN
Subject: [PATCH] build guile-static with guile-2.0
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When experimenting I found that using guile@HIDDEN as a base for
guile-static, the resulting guile-static didn't segfault on the target
architecture.


--=20
Efraim Flashner   <efraim@HIDDEN>   =D7=90=D7=A4=D7=A8=D7=99=D7=9D =
=D7=A4=D7=9C=D7=A9=D7=A0=D7=A8
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=46rom 18035c4ec2c698f01e6324bc013a536fc036cc0a Mon Sep 17 00:00:00 2001
=46rom: Efraim Flashner <efraim@HIDDEN>
Date: Mon, 11 Feb 2019 15:10:29 +0200
Subject: [PATCH 1/2] gnu: %guile-static: Build for guile@HIDDEN

%guile-static@HIDDEN currently segfaults when run.

* gnu/packages/make-bootstrap.scm (%guile-static): Rewrite package to
use guile@HIDDEN as a base.
---
 gnu/packages/make-bootstrap.scm | 34 ++++++++++++++++-----------------
 1 file changed, 17 insertions(+), 17 deletions(-)

diff --git a/gnu/packages/make-bootstrap.scm b/gnu/packages/make-bootstrap.=
scm
index c6002eb63a..836f24debf 100644
--- a/gnu/packages/make-bootstrap.scm
+++ b/gnu/packages/make-bootstrap.scm
@@ -1,6 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright =C2=A9 2012, 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Cour=
t=C3=A8s <ludo@HIDDEN>
-;;; Copyright =C2=A9 2017 Efraim Flashner <efraim@HIDDEN>
+;;; Copyright =C2=A9 2017, 2019 Efraim Flashner <efraim@HIDDEN>
 ;;; Copyright =C2=A9 2018 Tobias Geerinckx-Rice <me@HIDDEN>
 ;;; Copyright =C2=A9 2018 Mark H Weaver <mhw@HIDDEN>
 ;;;
@@ -518,29 +518,29 @@ for `sh' in $PATH, and without nscd, and with static =
NSS modules."
   ;; .scm and .go files relative to its installation directory, rather
   ;; than in hard-coded configure-time paths.
   (let* ((patches (cons* (search-patch "guile-relocatable.patch")
-                         (search-patch "guile-2.2-default-utf8.patch")
+                         (search-patch "guile-default-utf8.patch")
                          (search-patch "guile-linux-syscalls.patch")
-                         (origin-patches (package-source guile-2.2))))
-         (source  (origin (inherit (package-source guile-2.2))
+                         (origin-patches (package-source guile-2.0))))
+         (source  (origin (inherit (package-source guile-2.0))
                     (patches patches)))
-         (guile (package (inherit guile-2.2)
-                  (name (string-append (package-name guile-2.2) "-static"))
+         (guile (package (inherit guile-2.0)
+                  (name (string-append (package-name guile-2.0) "-static"))
                   (source source)
                   (synopsis "Statically-linked and relocatable Guile")
=20
                   ;; Remove the 'debug' output (see above for the reason.)
-                  (outputs (delete "debug" (package-outputs guile-2.2)))
+                  (outputs (delete "debug" (package-outputs guile-2.0)))
=20
                   (inputs
                    `(("libunistring:static" ,libunistring "static")
-                     ,@(package-inputs guile-2.2)))
+                     ,@(package-inputs guile-2.0)))
=20
                   (propagated-inputs
                    `(("bdw-gc" ,libgc)
                      ,@(alist-delete "bdw-gc"
-                                     (package-propagated-inputs guile-2.2)=
)))
+                                     (package-propagated-inputs guile-2.0)=
)))
                   (arguments
-                   (substitute-keyword-arguments (package-arguments guile-=
2.2)
+                   (substitute-keyword-arguments (package-arguments guile-=
2.0)
                      ((#:configure-flags flags '())
                       ;; When `configure' checks for ltdl availability, it
                       ;; doesn't try to link using libtool, and thus fails
@@ -563,7 +563,7 @@ for `sh' in $PATH, and without nscd, and with static NS=
S modules."
                                (("^guile_LDFLAGS =3D")
                                 "guile_LDFLAGS =3D -all-static")
=20
-                               ;; Add `-ldl' *after* libguile-2.2.la.
+                               ;; Add `-ldl' *after* libguile-2.0.la.
                                (("^guile_LDADD =3D(.*)$" _ ldadd)
                                 (string-append "guile_LDADD =3D "
                                                (string-trim-right ldadd)
@@ -591,13 +591,13 @@ for `sh' in $PATH, and without nscd, and with static =
NSS modules."
                 (out    (assoc-ref %outputs "out"))
                 (guile1 (string-append in "/bin/guile"))
                 (guile2 (string-append out "/bin/guile")))
-           (mkdir-p (string-append out "/share/guile/2.2"))
-           (copy-recursively (string-append in "/share/guile/2.2")
-                             (string-append out "/share/guile/2.2"))
+           (mkdir-p (string-append out "/share/guile/2.0"))
+           (copy-recursively (string-append in "/share/guile/2.0")
+                             (string-append out "/share/guile/2.0"))
=20
-           (mkdir-p (string-append out "/lib/guile/2.2/ccache"))
-           (copy-recursively (string-append in "/lib/guile/2.2/ccache")
-                             (string-append out "/lib/guile/2.2/ccache"))
+           (mkdir-p (string-append out "/lib/guile/2.0/ccache"))
+           (copy-recursively (string-append in "/lib/guile/2.0/ccache")
+                             (string-append out "/lib/guile/2.0/ccache"))
=20
            (mkdir (string-append out "/bin"))
            (copy-file guile1 guile2)
--=20
2.20.1


--hYooF8G/hrfVAmum--

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Information forwarded to bug-guix@HIDDEN:
bug#34427; Package guix. Full text available.

Message received at submit <at> debbugs.gnu.org:


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Date: Mon, 11 Feb 2019 11:11:36 +0200
From: Efraim Flashner <efraim@HIDDEN>
To: bug-guix@HIDDEN
Subject: guile-bootstrap@HIDDEN segfault?
Message-ID: <20190211091136.GA3284@macbook41>
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I'm testing %bootstrap-guile from bootstrap.scm and I'm getting a
segfault when runing guile --version. I've attached an strace of the
process.


--=20
Efraim Flashner   <efraim@HIDDEN>   =D7=90=D7=A4=D7=A8=D7=99=D7=9D =
=D7=A4=D7=9C=D7=A9=D7=A0=D7=A8
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Confidentiality cannot be guaranteed on emails sent or received unencrypted

--T4sUOijqQbZv57TR
Content-Type: text/plain; charset=utf-8
Content-Disposition: attachment; filename=guile_strace

16301 execve("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/bin/guile", ["/gnu/store/m7xa9rd869yrd88x6x7ri"..., "--version"], 0xbf8fd040 /* 27 vars */) = 0
16301 brk(NULL)                         = 0x106cc000
16301 brk(0x106ccd4c)                   = 0x106ccd4c
16301 uname({sysname="Linux", nodename="g4", ...}) = 0
16301 set_tid_address(0x106cc068)       = 16301
16301 set_robust_list(0x106cc070, 12)   = 0
16301 rt_sigaction(SIGRTMIN, {sa_handler=0x100f0748, sa_mask=[], sa_flags=SA_SIGINFO}, NULL, 8) = 0
16301 rt_sigaction(SIGRT_1, {sa_handler=0x100f0828, sa_mask=[], sa_flags=SA_RESTART|SA_SIGINFO}, NULL, 8) = 0
16301 rt_sigprocmask(SIG_UNBLOCK, [RTMIN RT_1], NULL, 8) = 0
16301 ugetrlimit(RLIMIT_STACK, {rlim_cur=8192*1024, rlim_max=RLIM_INFINITY}) = 0
16301 readlink("/proc/self/exe", "/gnu/store/m7xa9rd869yrd88x6x7ri"..., 4096) = 73
16301 brk(0x106edd4c)                   = 0x106edd4c
16301 brk(0x106ee000)                   = 0x106ee000
16301 openat(AT_FDCWD, "/run/current-system/locale/2.28/locale-archive", O_RDONLY|O_LARGEFILE|O_CLOEXEC) = -1 ENOENT (No such file or directory)
16301 openat(AT_FDCWD, "/gnu/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-cross-powerpc-linux-gnu-2.28/share/locale/locale.alias", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
16301 openat(AT_FDCWD, "/run/current-system/locale/2.28/en_IL/LC_IDENTIFICATION", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
16301 openat(AT_FDCWD, "/run/current-system/locale/2.28/en/LC_IDENTIFICATION", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
16301 write(2, "guile: warning: failed to instal"..., 41) = 41
16301 futex(0x1036dd44, FUTEX_WAKE_PRIVATE, 2147483647) = 0
16301 openat(AT_FDCWD, "/proc/self/maps", O_RDONLY|O_CLOEXEC) = 3
16301 ugetrlimit(RLIMIT_STACK, {rlim_cur=8192*1024, rlim_max=RLIM_INFINITY}) = 0
16301 fstat64(3, {st_mode=S_IFREG|0444, st_size=0, ...}) = 0
16301 read(3, "00100000-00103000 r-xp 00000000 "..., 1024) = 456
16301 close(3)                          = 0
16301 sched_getaffinity(16301, 32, [0]) = 4
16301 brk(0x106fe000)                   = 0x106fe000
16301 brk(0x1070e000)                   = 0x1070e000
16301 brk(0x1071e000)                   = 0x1071e000
16301 brk(0x1072e000)                   = 0x1072e000
16301 brk(0x1073e000)                   = 0x1073e000
16301 rt_sigaction(SIGPWR, {sa_handler=0x100e1514, sa_mask=~[INT QUIT ABRT TERM RTMIN RT_1], sa_flags=SA_RESTART|SA_SIGINFO}, NULL, 8) = 0
16301 rt_sigaction(SIGXCPU, {sa_handler=0x100e1200, sa_mask=~[INT QUIT ABRT TERM RTMIN RT_1], sa_flags=SA_RESTART}, NULL, 8) = 0
16301 rt_sigprocmask(SIG_UNBLOCK, [XCPU PWR], NULL, 8) = 0
16301 openat(AT_FDCWD, "/proc/stat", O_RDONLY) = 3
16301 read(3, "cpu  79046 1474 32444 6400729 91"..., 4096) = 1308
16301 close(3)                          = 0
16301 swapcontext(0xbfd68968, 0)        = 0
16301 brk(0x107be000)                   = 0x107be000
16301 pipe2([3, 4], O_CLOEXEC)          = 0
16301 futex(0x1036dc98, FUTEX_WAKE_PRIVATE, 2147483647) = 0
16301 clock_gettime(CLOCK_REALTIME, {tv_sec=1549875824, tv_nsec=168848026}) = 0
16301 clock_gettime(CLOCK_PROCESS_CPUTIME_ID, {tv_sec=0, tv_nsec=7758656}) = 0
16301 openat(AT_FDCWD, "/gnu/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-cross-powerpc-linux-gnu-2.28/lib/gconv/gconv-modules.cache", O_RDONLY) = -1 ENOENT (No such file or directory)
16301 openat(AT_FDCWD, "/gnu/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-cross-powerpc-linux-gnu-2.28/lib/gconv/gconv-modules", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
16301 futex(0x10380884, FUTEX_WAKE_PRIVATE, 2147483647) = 0
16301 openat(AT_FDCWD, "/dev/urandom", O_RDONLY|O_LARGEFILE) = 5
16301 fstat64(5, {st_mode=S_IFCHR|0666, st_rdev=makedev(0x1, 0x9), ...}) = 0
16301 ioctl(5, TCGETS, 0xbfd68ec8)      = -1 EINVAL (Invalid argument)
16301 read(5, "U\254.\237\4u\321\354\272\36e\316\7%\262\230\31A\2373\372p\313V7Le\325s\32\351\225"..., 4096) = 4096
16301 close(5)                          = 0
16301 brk(0x107ce000)                   = 0x107ce000
16301 ioctl(0, TCGETS, {B38400 opost isig icanon echo ...}) = 0
16301 mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb7b6e000
16301 fcntl64(0, F_GETFL)               = 0x2 (flags O_RDWR)
16301 _llseek(0, 0, 0xbfd68a38, SEEK_CUR) = -1 ESPIPE (Illegal seek)
16301 ioctl(1, TCGETS, {B38400 opost isig icanon echo ...}) = 0
16301 fcntl64(1, F_GETFL)               = 0x2 (flags O_RDWR)
16301 _llseek(1, 0, 0xbfd68a38, SEEK_CUR) = -1 ESPIPE (Illegal seek)
16301 ioctl(2, TCGETS, {B38400 opost isig icanon echo ...}) = 0
16301 fcntl64(2, F_GETFL)               = 0x2 (flags O_RDWR)
16301 _llseek(2, 0, 0xbfd68a38, SEEK_CUR) = -1 ESPIPE (Illegal seek)
16301 readlink("/proc/self/exe", "/gnu/store/m7xa9rd869yrd88x6x7ri"..., 256) = 73
16301 lstat64("/gnu", {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
16301 lstat64("/gnu/store", {st_mode=S_IFDIR|S_ISVTX|0775, st_size=73728, ...}) = 0
16301 lstat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0", {st_mode=S_IFDIR|0555, st_size=4096, ...}) = 0
16301 lstat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/bin", {st_mode=S_IFDIR|0555, st_size=4096, ...}) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/share/guile/2.2/ice-9/eval.scm", {st_mode=S_IFREG|0444, st_size=25718, ...}) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/eval.go", {st_mode=S_IFREG|0444, st_size=87205, ...}) = 0
16301 openat(AT_FDCWD, "/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/eval.go", O_RDONLY|O_LARGEFILE|O_CLOEXEC) = 5
16301 _llseek(5, 0, [87205], SEEK_END)  = 0
16301 mmap2(NULL, 87205, PROT_READ, MAP_PRIVATE, 5, 0) = 0xb7b58000
16301 close(5)                          = 0
16301 mprotect(0xb7b68000, 1892, PROT_READ|PROT_WRITE) = 0
16301 prlimit64(0, RLIMIT_STACK, NULL, {rlim_cur=8192*1024, rlim_max=RLIM64_INFINITY}) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/share/guile/2.2/init.scm", 0xbfd69048) = -1 ENOENT (No such file or directory)
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/share/guile/2.2/ice-9/boot-9.scm", {st_mode=S_IFREG|0444, st_size=147360, ...}) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/boot-9.go", {st_mode=S_IFREG|0444, st_size=516373, ...}) = 0
16301 openat(AT_FDCWD, "/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/boot-9.go", O_RDONLY|O_LARGEFILE|O_CLOEXEC) = 5
16301 _llseek(5, 0, [516373], SEEK_END) = 0
16301 mmap2(NULL, 516373, PROT_READ, MAP_PRIVATE, 5, 0) = 0xb7ad9000
16301 close(5)                          = 0
16301 mprotect(0xb7b29000, 73344, PROT_READ|PROT_WRITE) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/share/guile/2.2/ice-9/psyntax-pp.scm", {st_mode=S_IFREG|0444, st_size=185011, ...}) = 0
16301 stat64("/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/psyntax-pp.go", {st_mode=S_IFREG|0444, st_size=472229, ...}) = 0
16301 openat(AT_FDCWD, "/gnu/store/m7xa9rd869yrd88x6x7ri6wnan4f7yl4-guile-bootstrap-2.0/lib/guile/2.2/ccache/ice-9/psyntax-pp.go", O_RDONLY|O_LARGEFILE|O_CLOEXEC) = 5
16301 _llseek(5, 0, [472229], SEEK_END) = 0
16301 mmap2(NULL, 472229, PROT_READ, MAP_PRIVATE, 5, 0) = 0xb7a65000
16301 close(5)                          = 0
16301 mprotect(0xb7ab5000, 34496, PROT_READ|PROT_WRITE) = 0
16301 --- SIGSEGV {si_signo=SIGSEGV, si_code=SEGV_MAPERR, si_addr=0x31dbc378} ---
16301 +++ killed by SIGSEGV +++

--T4sUOijqQbZv57TR--

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Acknowledgement sent to Efraim Flashner <efraim@HIDDEN>:
New bug report received and forwarded. Copy sent to bug-guix@HIDDEN. Full text available.
Report forwarded to bug-guix@HIDDEN:
bug#34427; Package guix. Full text available.
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