GNU bug report logs - #47189
octave needs to be wrapped with coreutils

Please note: This is a static page, with minimal formatting, updated once a day.
Click here to see this page with the latest information and nicer formatting.
Package: guix; Reported by: Efraim Flashner <efraim@HIDDEN>; Keywords: easy; dated Tue, 16 Mar 2021 11:48:02 UTC; Maintainer for guix is bug-guix@HIDDEN.

Message received at 47189 <at> debbugs.gnu.org:


Received: (at 47189) by debbugs.gnu.org; 24 Sep 2024 05:32:12 +0000
From debbugs-submit-bounces <at> debbugs.gnu.org Tue Sep 24 01:32:12 2024
Received: from localhost ([127.0.0.1]:45052 helo=debbugs.gnu.org)
	by debbugs.gnu.org with esmtp (Exim 4.84_2)
	(envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>)
	id 1ssy9j-0000J7-Kz
	for submit <at> debbugs.gnu.org; Tue, 24 Sep 2024 01:32:12 -0400
Received: from mail-yb1-f171.google.com ([209.85.219.171]:53568)
 by debbugs.gnu.org with esmtp (Exim 4.84_2)
 (envelope-from <necto.ne@HIDDEN>) id 1ssxcM-0006aU-JM
 for 47189 <at> debbugs.gnu.org; Tue, 24 Sep 2024 00:57:42 -0400
Received: by mail-yb1-f171.google.com with SMTP id
 3f1490d57ef6-e1a74ee4c75so4391829276.3
 for <47189 <at> debbugs.gnu.org>; Mon, 23 Sep 2024 21:57:18 -0700 (PDT)
DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=gmail.com; s=20230601; t=1727153773; x=1727758573; darn=debbugs.gnu.org;
 h=to:subject:message-id:date:from:mime-version:from:to:cc:subject
 :date:message-id:reply-to;
 bh=plfjSIAyPl1ON2VJ5RW49IgBUeG6j2EPwQdoloR+4G4=;
 b=DPlPUc39ms6QzMq94lprhtn8VovraJ2w5hUBsmUNRcDyDLIPneBCro36GF2NTE7/bs
 utCo4XPrcTqVyyvy+0znXBnQK/eWX54PEWHczgdFagD5v60ab1/ok4zpCnBRZetDIfu7
 l/Bicdjn7UHMPDW4FIWBgRMupdlZ/T7qn5slP7PAiAXJlVacQ41k6dok+29uFK065FU1
 Tpc31JzUUGeBSH6FgOjsUswvYM34nW+LXEspkBNungfFkKm9JlEn1N5Hh06efOfBIfkM
 RiUWiug2p3MN/x18YnpapWPXA94QxltmETTUWXnGWSTr8x1OJgP6U0P5LSs7iwcyF8JT
 36cA==
X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=1e100.net; s=20230601; t=1727153773; x=1727758573;
 h=to:subject:message-id:date:from:mime-version:x-gm-message-state
 :from:to:cc:subject:date:message-id:reply-to;
 bh=plfjSIAyPl1ON2VJ5RW49IgBUeG6j2EPwQdoloR+4G4=;
 b=gyqO6dH3bDOMN6wmoQzDmPmJZaE0JikH1xlAlg9lBMIHUT/mUyLzJNqQtuCIbaPK5S
 Q6PcmLI1Lnu7euX9R7+7bqmbcsBwds8h2mt8Ei66VEQMXGoEcgFsEi+8R+PQ3C7QVi4i
 M0LfMTzXpgeutYFgc9EbgIopD47wB8XZRtEvn+Iw0Af/+Fir4bQeV0kSOAe6EIVLj1/E
 BKOJKFMT1wE95zW1loJPDY70bCZVqQZjbArKz7Y6Da0k+OfG2rEH2noLjcXehzM/NEIM
 2MMbzbeadzwq+2c26LlUavdHkj0QYGWumtZqu2l7BJ58B+NKj4Nc3ODatPAmeEDJW0vm
 tMhw==
X-Gm-Message-State: AOJu0YylkbPlufqvYqWWUWHCkayDXOsO/minz1SBFiEZbX+7wnGxVLDh
 IssOJJ/jnfpGC0Yo428q1NHDwKiQf7G0u9oqAUGt9uTeBhu0gf7+gfOWVqfSj8QdGn1SgE/mQEA
 V31o/roKq8eiYlzOEGsWqhOhY3ncOIkqm
X-Google-Smtp-Source: AGHT+IGCCOgqPYczpve6Z+dDEUftWXtr9xJABWcsJxMNSzDRvhQ0mq3yQDSSFND/nFcewvfPjH5XgNX7uCLk5kIu/ws=
X-Received: by 2002:a05:6902:158b:b0:e1d:2261:cb25 with SMTP id
 3f1490d57ef6-e2250c3d1c7mr11269176276.18.1727153772777; Mon, 23 Sep 2024
 21:56:12 -0700 (PDT)
MIME-Version: 1.0
From: Arseniy Zaostrovnykh <necto.ne@HIDDEN>
Date: Tue, 24 Sep 2024 06:56:02 +0200
Message-ID: <CANy7P7SGF=Em_X5whJ=oGxeK0BhPyXfFMgYowXq8oOMxpJqisQ@HIDDEN>
Subject: [PATCH] gnu: octave-cli: Make coreutils an explicit input
To: 47189 <at> debbugs.gnu.org
Content-Type: multipart/alternative; boundary="000000000000195cae0622d65365"
X-Spam-Score: -0.0 (/)
X-Debbugs-Envelope-To: 47189
X-Mailman-Approved-At: Tue, 24 Sep 2024 01:32:05 -0400
X-BeenThere: debbugs-submit <at> debbugs.gnu.org
X-Mailman-Version: 2.1.18
Precedence: list
List-Id: <debbugs-submit.debbugs.gnu.org>
List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe>
List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/>
List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org>
List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help>
List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe>
Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org
Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org>
X-Spam-Score: -1.0 (-)

--000000000000195cae0622d65365
Content-Type: text/plain; charset="UTF-8"

This ensures coreutils like `cp` are available when running octave,
which is assumed by some of its builtin functions.
Resolves 47189

* gnu/packages/maths.scm(octave-cli): make coreutils input explicit
---
 gnu/packages/maths.scm | 1 +
 1 file changed, 1 insertion(+)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 5f47d5e390..8821a42712 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -3055,6 +3055,7 @@ (define-public octave-cli
      (list alsa-lib
            arpack-ng
            bdb
+           coreutils ;; mention explicitly to make available for the built
octave
            curl
            fftw
            fftwf
-- 
2.46.0

--000000000000195cae0622d65365
Content-Type: text/html; charset="UTF-8"
Content-Transfer-Encoding: quoted-printable

<div dir=3D"ltr">This ensures coreutils like `cp` are available when runnin=
g octave,<br>which is assumed by some of its builtin functions.<br>Resolves=
 47189<br><br>* gnu/packages/maths.scm(octave-cli): make coreutils input ex=
plicit<br>---<br>=C2=A0gnu/packages/maths.scm | 1 +<br>=C2=A01 file changed=
, 1 insertion(+)<br><br>diff --git a/gnu/packages/maths.scm b/gnu/packages/=
maths.scm<br>index 5f47d5e390..8821a42712 100644<br>--- a/gnu/packages/math=
s.scm<br>+++ b/gnu/packages/maths.scm<br>@@ -3055,6 +3055,7 @@ (define-publ=
ic octave-cli<br>=C2=A0 =C2=A0 =C2=A0 (list alsa-lib<br>=C2=A0 =C2=A0 =C2=
=A0 =C2=A0 =C2=A0 =C2=A0 arpack-ng<br>=C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =
=C2=A0 bdb<br>+ =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 coreutils ;; mention exp=
licitly to make available for the built octave<br>=C2=A0 =C2=A0 =C2=A0 =C2=
=A0 =C2=A0 =C2=A0 curl<br>=C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 fftw<br=
>=C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 fftwf<br>-- <br>2.46.0</div>

--000000000000195cae0622d65365--
Information forwarded to bug-guix@HIDDEN:
bug#47189; Package guix. Full text available.

Message received at 47189 <at> debbugs.gnu.org:


Received: (at 47189) by debbugs.gnu.org; 24 Sep 2024 05:32:09 +0000
From debbugs-submit-bounces <at> debbugs.gnu.org Tue Sep 24 01:32:09 2024
Received: from localhost ([127.0.0.1]:45048 helo=debbugs.gnu.org)
	by debbugs.gnu.org with esmtp (Exim 4.84_2)
	(envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>)
	id 1ssy9e-0000It-K9
	for submit <at> debbugs.gnu.org; Tue, 24 Sep 2024 01:32:09 -0400
Received: from mail-yw1-f175.google.com ([209.85.128.175]:42041)
 by debbugs.gnu.org with esmtp (Exim 4.84_2)
 (envelope-from <necto.ne@HIDDEN>) id 1ssxZp-0006NM-BD
 for 47189 <at> debbugs.gnu.org; Tue, 24 Sep 2024 00:55:07 -0400
Received: by mail-yw1-f175.google.com with SMTP id
 00721157ae682-6db9f7969fdso40757157b3.0
 for <47189 <at> debbugs.gnu.org>; Mon, 23 Sep 2024 21:54:41 -0700 (PDT)
DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=gmail.com; s=20230601; t=1727153615; x=1727758415; darn=debbugs.gnu.org;
 h=to:subject:message-id:date:from:mime-version:from:to:cc:subject
 :date:message-id:reply-to;
 bh=UPPlVjUbwwg5oiFuSbY8FsB9QFv/zpkAI+jVJ+6YLHw=;
 b=MBvE7tTSbDvjvvVXHh1Fv32BPO+Yfyn4rI9KQE857h4uPz9ri7GKUuho273c5cZhvM
 qSswGeoq7j/sW6SMhfN5i1zLwwtbH44+MP5sElD4oakgYYmT8z8zthnnPwNScdwoW/hK
 kULTYGPZofnL0inTjCiHkqaQy+qBldltpNC8FmmllCdfphzBJBGym/wNVPILO1m4hJ9m
 4FjUtfh63zZMERpXkVUArxmjyNu1f5CVn8AHfiwZC/FI8YdhbcM+WhLr6lAq7+pzjwWC
 G9yNaQ2ZVtdVtxwQFsyiktJhpnuL43UA5EAE9dtRliBOntIfSKebWqrUdSw4G4+AabV3
 Ewcg==
X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=1e100.net; s=20230601; t=1727153615; x=1727758415;
 h=to:subject:message-id:date:from:mime-version:x-gm-message-state
 :from:to:cc:subject:date:message-id:reply-to;
 bh=UPPlVjUbwwg5oiFuSbY8FsB9QFv/zpkAI+jVJ+6YLHw=;
 b=K/cfmZaoubxG1EJBtXfwOcfj+6J/6os0kvW5uHk7PkF1R0DiaPlb2YMnMfZWeG5Y1C
 wpD2noxlTtQMxjB/IaZNvor84mQ8Ccew1+ajy3meaUhFGvqAgkFyNr02qxBjbrfpJTg/
 VJXfmqC3Iy0FkvWS556yYfH1FqQZUBhOIAq0pqeqaWIfmM7O3ybyu5S3C/GLZnkZbvnb
 2UG5Xr4xQS1GGvhKzZqZxPjr/6XWk035PdFVqfyK0uTsLIdtziWgXDfC9KvciTE6CFcj
 hno/uIzON0h3Pu7o6jetZDRr74NbgcaQIgDRi3lRnLauGNNjBmriPyafI1WKgGayxK4O
 VN7w==
X-Gm-Message-State: AOJu0Yw+kcFmeQ0ZR+BDmfauQ/aG76auvGreGwcaoPzFkjYb8DwIBJ0y
 h/V7HHwNDRsTtYP/vfZoNZo9zRID+wwasjp6NvaSjjkaobBah7vmkR6qs93BTL1PPLdUMvkK2hn
 dpQejoCPi9zJ7WEaiPSmeYr0RLA6OlQ==
X-Google-Smtp-Source: AGHT+IFYWIw26L8+eFPAZz3zKa1aMsftlPf9ALdjvPgOV0Hp+HCtv+cebSWPtvp96M6a/ThzwcVhsNbC+UaL4YUJDmY=
X-Received: by 2002:a05:690c:c0f:b0:6d5:b062:4beb with SMTP id
 00721157ae682-6e208765a7dmr19029697b3.16.1727153615610; Mon, 23 Sep 2024
 21:53:35 -0700 (PDT)
MIME-Version: 1.0
From: Arseniy Zaostrovnykh <necto.ne@HIDDEN>
Date: Tue, 24 Sep 2024 06:53:23 +0200
Message-ID: <CANy7P7QEKFigfAv7SH=ETKb4GsuzvC7XncNER=3mimB6=CEkaw@HIDDEN>
Subject: octave needs to be wrapped with coreutils
To: 47189 <at> debbugs.gnu.org
Content-Type: multipart/alternative; boundary="000000000000bb2cb80622d649cf"
X-Spam-Score: -0.0 (/)
X-Debbugs-Envelope-To: 47189
X-Mailman-Approved-At: Tue, 24 Sep 2024 01:32:05 -0400
X-BeenThere: debbugs-submit <at> debbugs.gnu.org
X-Mailman-Version: 2.1.18
Precedence: list
List-Id: <debbugs-submit.debbugs.gnu.org>
List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe>
List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/>
List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org>
List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help>
List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe>
Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org
Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org>
X-Spam-Score: -1.0 (-)

--000000000000bb2cb80622d649cf
Content-Type: text/plain; charset="UTF-8"

Hello!
I am about to send my first ever patch that fixes this easy issue. Please
let me know if it is the wrong channel, or I messed up the patch through my
gmail client.

--
Arseniy (a.k.a. Necto)

--000000000000bb2cb80622d649cf
Content-Type: text/html; charset="UTF-8"
Content-Transfer-Encoding: quoted-printable

<div dir=3D"ltr"><div>Hello!<br></div><div>I am about to send my first ever=
 patch that fixes this easy issue. Please let me know if it is the wrong ch=
annel, or I messed up the patch through my gmail client.</div><div><br></di=
v><div>--</div><div>Arseniy (a.k.a. Necto)<br></div><br></div>

--000000000000bb2cb80622d649cf--
Information forwarded to bug-guix@HIDDEN:
bug#47189; Package guix. Full text available.
Added tag(s) easy. Request was from Ludovic Courtès <ludo@HIDDEN> to control <at> debbugs.gnu.org. Full text available.

Message received at submit <at> debbugs.gnu.org:


Received: (at submit) by debbugs.gnu.org; 16 Mar 2021 11:47:24 +0000
From debbugs-submit-bounces <at> debbugs.gnu.org Tue Mar 16 07:47:24 2021
Received: from localhost ([127.0.0.1]:38358 helo=debbugs.gnu.org)
	by debbugs.gnu.org with esmtp (Exim 4.84_2)
	(envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>)
	id 1lM8AV-0005Uv-KZ
	for submit <at> debbugs.gnu.org; Tue, 16 Mar 2021 07:47:24 -0400
Received: from lists.gnu.org ([209.51.188.17]:60588)
 by debbugs.gnu.org with esmtp (Exim 4.84_2)
 (envelope-from <efraim@HIDDEN>) id 1lM8AT-0005Un-QJ
 for submit <at> debbugs.gnu.org; Tue, 16 Mar 2021 07:47:22 -0400
Received: from eggs.gnu.org ([2001:470:142:3::10]:60836)
 by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256)
 (Exim 4.90_1) (envelope-from <efraim@HIDDEN>)
 id 1lM8AT-00060e-I1
 for bug-guix@HIDDEN; Tue, 16 Mar 2021 07:47:21 -0400
Received: from flashner.co.il ([178.62.234.194]:50750)
 by eggs.gnu.org with esmtp (Exim 4.90_1)
 (envelope-from <efraim@HIDDEN>) id 1lM8AR-0001wx-5S
 for bug-guix@HIDDEN; Tue, 16 Mar 2021 07:47:21 -0400
Received: from localhost (unknown [31.210.181.184])
 by flashner.co.il (Postfix) with ESMTPSA id BA1C740221
 for <bug-guix@HIDDEN>; Tue, 16 Mar 2021 11:47:15 +0000 (UTC)
Date: Tue, 16 Mar 2021 13:46:42 +0200
From: Efraim Flashner <efraim@HIDDEN>
To: bug-guix@HIDDEN
Subject: octave needs to be wrapped with coreutils
Message-ID: <YFCaoi6G2h+Za8VG@3900XT>
MIME-Version: 1.0
Content-Type: multipart/signed; micalg=pgp-sha512;
 protocol="application/pgp-signature"; boundary="5lrxuaRcM+iO2Zus"
Content-Disposition: inline
X-PGP-Key-ID: 0x41AAE7DCCA3D8351
X-PGP-Key: https://flashner.co.il/~efraim/efraim_flashner.asc
X-PGP-Fingerprint: A28B F40C 3E55 1372 662D  14F7 41AA E7DC CA3D 8351
Received-SPF: pass client-ip=178.62.234.194;
 envelope-from=efraim@HIDDEN; helo=flashner.co.il
X-Spam_score_int: -18
X-Spam_score: -1.9
X-Spam_bar: -
X-Spam_report: (-1.9 / 5.0 requ) BAYES_00=-1.9, SPF_HELO_PASS=-0.001,
 SPF_PASS=-0.001 autolearn=ham autolearn_force=no
X-Spam_action: no action
X-Spam-Score: -1.3 (-)
X-Debbugs-Envelope-To: submit
X-BeenThere: debbugs-submit <at> debbugs.gnu.org
X-Mailman-Version: 2.1.18
Precedence: list
List-Id: <debbugs-submit.debbugs.gnu.org>
List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe>
List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/>
List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org>
List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help>
List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe>
Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org
Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org>
X-Spam-Score: -2.3 (--)


--5lrxuaRcM+iO2Zus
Content-Type: text/plain; charset=utf-8
Content-Disposition: inline
Content-Transfer-Encoding: quoted-printable

I tracked down a bug where octave has a function called 'copyfile' which
shells out to call 'cp -r' but in an environment without coreutils, or
when in a script with PATH unset, it fails.

try it out with the following:
touch foo
guix environment --pure --ad-hoc octave-cli -- \
    octave --eval 'copyfile("foo","bar");'

--=20
Efraim Flashner   <efraim@HIDDEN>   =D7=90=D7=A4=D7=A8=D7=99=D7=9D =
=D7=A4=D7=9C=D7=A9=D7=A0=D7=A8
GPG key =3D A28B F40C 3E55 1372 662D  14F7 41AA E7DC CA3D 8351
Confidentiality cannot be guaranteed on emails sent or received unencrypted

--5lrxuaRcM+iO2Zus
Content-Type: application/pgp-signature; name="signature.asc"

-----BEGIN PGP SIGNATURE-----
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=6PPC
-----END PGP SIGNATURE-----

--5lrxuaRcM+iO2Zus--
Acknowledgement sent to Efraim Flashner <efraim@HIDDEN>:
New bug report received and forwarded. Copy sent to bug-guix@HIDDEN. Full text available.
Report forwarded to bug-guix@HIDDEN:
bug#47189; Package guix. Full text available.
Please note: This is a static page, with minimal formatting, updated once a day.
Click here to see this page with the latest information and nicer formatting.
Last modified: Sun, 12 Jan 2025 05:45:02 UTC

GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997 nCipher Corporation Ltd, 1994-97 Ian Jackson.