GNU bug report logs - #47561
MIA 2.4.6 fails to build

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Package: guix;

Reported by: Ludovic Courtès <ludovic.courtes <at> inria.fr>

Date: Fri, 2 Apr 2021 07:10:02 UTC

Severity: normal

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Report forwarded to bug-guix <at> gnu.org:
bug#47561; Package guix. (Fri, 02 Apr 2021 07:10:02 GMT) Full text and rfc822 format available.

Acknowledgement sent to Ludovic Courtès <ludovic.courtes <at> inria.fr>:
New bug report received and forwarded. Copy sent to bug-guix <at> gnu.org. (Fri, 02 Apr 2021 07:10:02 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Ludovic Courtès <ludovic.courtes <at> inria.fr>
To: <bug-guix <at> gnu.org>
Subject: MIA 2.4.6 fails to build
Date: Fri, 02 Apr 2021 09:09:17 +0200
MIA 2.4.6 fails to build as of 9098745b181b3022587a35afd255f7ff1d41ac86
presumably due to CMake shenanigans as reported here:

  https://issues.guix.gnu.org/46724#9

Build failure looks like this:

--8<---------------cut here---------------start------------->8---
[ 13%] Building CXX object mia/core/CMakeFiles/test-core.dir/test_core_combined.cc.o
cd /tmp/guix-build-mia-2.4.6.drv-0/build/mia/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++  -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_SYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DHAVE_CONFIG_H -I/gnu/store/n50ikpnyzdda0zklwnmqasklcrif2csg-eigen-3.3.8/include/eigen3 -I/gnu/store/c8w9z48vvx2a3q3k44ch9yn00wk1qwhb-libxml2-2.9.10/include/libxml2 -I/tmp/guix-build-mia-2.4.6.drv-0/build -I/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6  -fpermissive   -fvisibility=hidden -O2 -g -DNDEBUG   -o CMakeFiles/test-core.dir/test_core_combined.cc.o -c /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/mia/core/test_core_combined.cc
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_normals(mia::CTriangleMesh&, vtkPointData&)’:
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:179:12: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
   normals->GetTupleValue(i, &is->x);
            ^~~~~~~~~~~~~
            GetValue
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_colors(mia::CTriangleMesh&, vtkPointData&)’:
/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:211:11: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
   colors->GetTupleValue(i, &is->x);
           ^~~~~~~~~~~~~
           GetValue
make[2]: *** [addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/build.make:66: addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/vtkmesh.cc.o] Error 1
make[2]: Leaving directory '/tmp/guix-build-mia-2.4.6.drv-0/build'
--8<---------------cut here---------------end--------------->8---

The problem here is what we’re missing -I flags for VTK, which might be
a CMake incompatibility issue.

Thoughts?

Ludo’.




Information forwarded to bug-guix <at> gnu.org:
bug#47561; Package guix. (Thu, 06 May 2021 11:52:01 GMT) Full text and rfc822 format available.

Message #8 received at 47561 <at> debbugs.gnu.org (full text, mbox):

From: Efraim Flashner <efraim <at> flashner.co.il>
To: Ludovic Courtès <ludovic.courtes <at> inria.fr>
Cc: 47561 <at> debbugs.gnu.org
Subject: Re: bug#47561: MIA 2.4.6 fails to build
Date: Thu, 6 May 2021 14:51:21 +0300
[Message part 1 (text/plain, inline)]
On Fri, Apr 02, 2021 at 09:09:17AM +0200, Ludovic Courtès wrote:
> MIA 2.4.6 fails to build as of 9098745b181b3022587a35afd255f7ff1d41ac86
> presumably due to CMake shenanigans as reported here:
> 
>   https://issues.guix.gnu.org/46724#9
> 
> Build failure looks like this:
> 
> --8<---------------cut here---------------start------------->8---
> [ 13%] Building CXX object mia/core/CMakeFiles/test-core.dir/test_core_combined.cc.o
> cd /tmp/guix-build-mia-2.4.6.drv-0/build/mia/core && /gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin/c++  -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_VERSION=3 -DBOOST_SYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DHAVE_CONFIG_H -I/gnu/store/n50ikpnyzdda0zklwnmqasklcrif2csg-eigen-3.3.8/include/eigen3 -I/gnu/store/c8w9z48vvx2a3q3k44ch9yn00wk1qwhb-libxml2-2.9.10/include/libxml2 -I/tmp/guix-build-mia-2.4.6.drv-0/build -I/tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6  -fpermissive   -fvisibility=hidden -O2 -g -DNDEBUG   -o CMakeFiles/test-core.dir/test_core_combined.cc.o -c /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/mia/core/test_core_combined.cc
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_normals(mia::CTriangleMesh&, vtkPointData&)’:
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:179:12: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
>    normals->GetTupleValue(i, &is->x);
>             ^~~~~~~~~~~~~
>             GetValue
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc: In function ‘void vtkmia::read_colors(mia::CTriangleMesh&, vtkPointData&)’:
> /tmp/guix-build-mia-2.4.6.drv-0/mia-2.4.6/addons/vtk/vtkmesh.cc:211:11: error: ‘class vtkFloatArray’ has no member named ‘GetTupleValue’; did you mean ‘GetValue’?
>    colors->GetTupleValue(i, &is->x);
>            ^~~~~~~~~~~~~
>            GetValue
> make[2]: *** [addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/build.make:66: addons/vtk/CMakeFiles/mesh-io-vtkmesh-common.dir/vtkmesh.cc.o] Error 1
> make[2]: Leaving directory '/tmp/guix-build-mia-2.4.6.drv-0/build'
> --8<---------------cut here---------------end--------------->8---
> 
> The problem here is what we’re missing -I flags for VTK, which might be
> a CMake incompatibility issue.
> 
> Thoughts?
> 
> Ludo’.

Debian builds mia with vtk <at> 7, which is the one we're missing between 6
and 9.

-- 
Efraim Flashner   <efraim <at> flashner.co.il>   אפרים פלשנר
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This bug report was last modified 3 years and 205 days ago.

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