GNU bug report logs -
#51509
[PATCH] doc: Mention Hg support for 'guix import cran' and some caveats.
Previous Next
To reply to this bug, email your comments to 51509 AT debbugs.gnu.org.
Toggle the display of automated, internal messages from the tracker.
Report forwarded
to
rekado <at> elephly.net, guix-patches <at> gnu.org
:
bug#51509
; Package
guix-patches
.
(Sat, 30 Oct 2021 11:04:02 GMT)
Full text and
rfc822 format available.
Acknowledgement sent
to
Xinglu Chen <public <at> yoctocell.xyz>
:
New bug report received and forwarded. Copy sent to
rekado <at> elephly.net, guix-patches <at> gnu.org
.
(Sat, 30 Oct 2021 11:04:02 GMT)
Full text and
rfc822 format available.
Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
* guix.texi (Invoking guix import): Mention support for Mercurial repositories
for the CRAN importer, and some caveats with the Git and Mercurial backends.
---
Prompted by Ricardo’s comments on the “Accuracy of importers” thread:
<https://yhetil.org/guix-devel/87mtmq7pes.fsf <at> disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
doc/guix.texi | 12 +++++++++---
1 file changed, 9 insertions(+), 3 deletions(-)
diff --git a/doc/guix.texi b/doc/guix.texi
index 22215214e0..661e29e69c 100644
--- a/doc/guix.texi
+++ b/doc/guix.texi
@@ -11852,14 +11852,20 @@
guix import cran --archive=bioconductor GenomicRanges
@end example
-Finally, you can also import R packages that have not yet been published on
-CRAN or Bioconductor as long as they are in a git repository. Use
-@option{--archive=git} followed by the URL of the git repository:
+Finally, you can also import R packages that have not yet been published
+on CRAN or Bioconductor as long as they are in a Git or Mercurial
+repository. Use @option{--archive=git} or @option{--archive=hg}
+followed by the URL of the repository:
@example
guix import cran --archive=git https://github.com/immunogenomics/harmony
@end example
+One limitation of this is that dependencies that are also hosted on Git
+or Mercurial repositories cannot be imported. Also, note that the
+@command{hg} executable has to be in the users's @env{PATH} for the
+Mercurial backend to work.
+
@item texlive
@cindex TeX Live
@cindex CTAN
base-commit: cd188b9c6f28bd907b625a5cd6c616d1d2529671
--
2.33.0
Information forwarded
to
guix-patches <at> gnu.org
:
bug#51509
; Package
guix-patches
.
(Sat, 27 Nov 2021 09:19:01 GMT)
Full text and
rfc822 format available.
Message #8 received at 51509 <at> debbugs.gnu.org (full text, mbox):
Hi,
> * guix.texi (Invoking guix import): Mention support for
> Mercurial repositories
> for the CRAN importer, and some caveats with the Git and
> Mercurial backends.
> ---
> Prompted by Ricardo’s comments on the “Accuracy of importers”
> thread:
>
> <https://yhetil.org/guix-devel/87mtmq7pes.fsf <at> disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
I’d prefer not to mention the limitation (as it’s an
rstudio-specific modification to DESCRIPTION files) and instead
work on supporting this extension to the DESCRIPTION file. I
already have some WIP to address this.
--
Ricardo
Information forwarded
to
guix-patches <at> gnu.org
:
bug#51509
; Package
guix-patches
.
(Sun, 19 Dec 2021 09:05:01 GMT)
Full text and
rfc822 format available.
Message #11 received at 51509 <at> debbugs.gnu.org (full text, mbox):
[Message part 1 (text/plain, inline)]
Hi,
On Sat, Nov 27 2021, Ricardo Wurmus wrote:
> Hi,
>
>> * guix.texi (Invoking guix import): Mention support for
>> Mercurial repositories
>> for the CRAN importer, and some caveats with the Git and
>> Mercurial backends.
>> ---
>> Prompted by Ricardo’s comments on the “Accuracy of importers”
>> thread:
>>
>> <https://yhetil.org/guix-devel/87mtmq7pes.fsf <at> disroot.org/T/#mabff98d436895c18f177c4016792ec215f645bbf>
>
> I’d prefer not to mention the limitation (as it’s an
> rstudio-specific modification to DESCRIPTION files) and instead
> work on supporting this extension to the DESCRIPTION file. I
> already have some WIP to address this.
Just to clarify, you are referring to the fact that the ‘--recursive’
option won’t work, not the fact that the ‘hg’ binary needs to be in
$PATH, right? In that case I will send a new reroll removing the
following sentence:
--8<---------------cut here---------------start------------->8---
+One limitation of this is that dependencies that are also hosted on Git
+or Mercurial repositories cannot be imported.
--8<---------------cut here---------------end--------------->8---
[signature.asc (application/pgp-signature, inline)]
This bug report was last modified 3 years and 85 days ago.
Previous Next
GNU bug tracking system
Copyright (C) 1999 Darren O. Benham,
1997,2003 nCipher Corporation Ltd,
1994-97 Ian Jackson.