GNU bug report logs - #52708
[BUG] Guix checkout fails `make check`

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Christopher Rodriguez <yewscion <at> gmail.com>
To: bug-guix <at> gnu.org
Subject: [BUG] Guix checkout fails `make check`
Date: Tue, 21 Dec 2021 12:21:58 -0500

[Message part 1 (text/plain, inline)]

               __________________________________________

                [BUG] GUIX CHECKOUT FAILS `MAKE CHECK`

                                yewscion
               __________________________________________


Table of Contents
_________________

1. Environment
2. Steps to reproduce
3. Expected Result
4. Actual Result
5. Visual Proof (screenshots, videos, text)
6. Severity/Priority


1 Environment
=============

  - *Device:* Linode Virtual Server, and Lenovo Thinkpad E14.
  - *OS:* Guix System, and a workplace-modified version of Ubuntu.
  - *Commits:* guix: `2c469f04a3bec27b1f49680c638814bc06075b9a`.
  - *Substitutes:* Enabled.
  - *Additional Channels:* None inside of `guix shell --pure -D \
    guix`.
  - *Blast Radius:* Two Failed Checks (guix-pack-relocatable.sh and
    guix-git-autenticate.sh).


2 Steps to reproduce
====================

  1. *Clone:* Run `git clone
      <https://git.savannah.gnu.org/git/guix.git>`.

  2. *Enter Dev Environment:* `cd guix && guix shell --pure -D guix`.

  3. *Bootstrap and Configure:* `./bootstrap && ./configure
      --localstatedir=/var`.

  4. *Make and Check:* `make && make check`.


3 Expected Result
=================

  All tests should pass or be skipped.


4 Actual Result
===============

  2 FAILs, and 1 XFAIL. (guix-pack-relocatable.sh and
    guix-git-autenticate.sh)


5 Visual Proof (screenshots, videos, text)
==========================================

  Attached are personally created logs of each step of the process. For
  further clarity, here is the output of `git -C ~/Downloads/guix log -n
  1` and `guix describe` on my GuixSD install. And because I discovered
  it after the fact, I've also attached the two logfiles created by the
  above process (config.log and testsuite.log).

  #+name git -C ~/Downloads/guix log -n 1
  ,----
  | commit 9834ff5d3293b2af728b41314c18ca7fb2081efe (HEAD -> master, 
origin/master, origin/HEAD)
  | Author: Efraim Flashner <efraim <at> flashner.co.il>
  | Date:   Tue Dec 21 16:15:03 2021 +0200
  |
  | gnu: binutils-gold: Skip gold testsuite on some architectures.
  |
  |   * gnu/packages/base.scm (binutils-gold)[arguments]: Add a phase 
on some
  |   architecturest to skip the gold testsuite.
  `----

  #+name guix describe
  ,----
  | [16.0] {12:12} ming <at> gorse:~/$ guix describe
  | Generation 18    Dec 20 2021 13:39:05    (current)
  | guix 84fe3a8
  |   repository URL: https://git.savannah.gnu.org/git/guix.git
  |   branch: master
  |   commit: 84fe3a88179d5a6a5c619c408a4fd4fe2a779652
  | yewscion 84d82fe
  |   repository URL: https://git.sr.ht/~yewscion/yewscion-guix-channel
  |   branch: trunk
  |   commit: 84d82fede37110a34e2df5e1712eb3bf934936cf
  `----


6 Severity/Priority
===================

  5 (Lowest Priority)

[test-suite.log (text/x-log, attachment)]

[config.log (text/x-log, attachment)]

[2021-12-21-guix-make.log (text/x-log, attachment)]

[2021-12-21-guix-make-check.log (text/x-log, attachment)]

[2021-12-21-guix-configure.log (text/x-log, attachment)]

[2021-12-21-guix-bootstrap.log (text/x-log, attachment)]

[OpenPGP_0x1102102EBE7C3AE4.asc (application/pgp-keys, attachment)]

[OpenPGP_signature (application/pgp-signature, attachment)]

Message #8 received at 52708 <at> debbugs.gnu.org (full text, mbox):

From: Christopher Rodriguez <yewscion <at> gmail.com>
To: 52708 <at> debbugs.gnu.org
Subject: [BUG] Guix checkout fails `make check`
Date: Tue, 21 Dec 2021 12:58:14 -0500

[Message part 1 (text/plain, inline)]

As an aside: It seems as though on the web interface at least I am 
causing all of my attachments to be concatenated with my messages. Is 
there a specific way to attach files to prevent this, or is it intended?

[OpenPGP_0x1102102EBE7C3AE4.asc (application/pgp-keys, attachment)]

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Message #11 received at 52708 <at> debbugs.gnu.org (full text, mbox):

From: Maxime Devos <maximedevos <at> telenet.be>
To: Christopher Rodriguez <yewscion <at> gmail.com>, 52708 <at> debbugs.gnu.org
Subject: Re: bug#52708: [BUG] Guix checkout fails `make check`
Date: Tue, 21 Dec 2021 18:05:42 +0000

Christopher Rodriguez schreef op di 21-12-2021 om 12:21 [-0500]:
> 5 Visual Proof (screenshots, videos, text)
> ==========================================
> 
>    Attached are personally created logs of each step of the process.
> For
>    further clarity, here is the output of `git -C ~/Downloads/guix
> log -n
>    1` and `guix describe` on my GuixSD install. And because I
> discovered
>    it after the fact, I've also attached the two logfiles created by
> the
>    above process (config.log and testsuite.log).

(Not really relevant to the bug report) It's named Guix System now, not
GuixSD. Also, logs are pure text and hence not visual?

Message #14 received at 52708 <at> debbugs.gnu.org (full text, mbox):

From: Christopher Rodriguez <yewscion <at> gmail.com>
To: 52708 <at> debbugs.gnu.org
Subject: [BUG] Guix checkout fails `make check`
Date: Tue, 21 Dec 2021 13:12:40 -0500

[Message part 1 (text/plain, inline)]

Copy that, will refer to it as 'Guix System' from now on. I'd picked up 
GuixSD from reading (apparently outdated) blog posts.

Regarding the section header, I'd just copied something I found online 
for submitting good bug reports. You're right, though, it's oddly named. 
I think, going forward, I'll just use the word 'Evidence'.

Thanks again!

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Message #17 received at 52708 <at> debbugs.gnu.org (full text, mbox):

From: Ludovic Courtès <ludo <at> gnu.org>
To: Christopher Rodriguez <yewscion <at> gmail.com>
Cc: 52708 <at> debbugs.gnu.org
Subject: Re: bug#52708: [BUG] Guix checkout fails `make check`
Date: Thu, 23 Dec 2021 00:23:58 +0100

Hi Christopher,

Christopher Rodriguez <yewscion <at> gmail.com> skribis:

> FAIL: tests/guix-git-authenticate
> =================================
>
> + '[' -d /home/ming/Downloads/guix/.git ']'
> + guile -c '(use-modules (git))
>   (member "refs/heads/keyring" (branch-list (repository-open ".")))'
> + intro_commit=9edb3f66fd807b096b48283debdcddccfea34bad
> + intro_signer='BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA'
> + cache_key=test-24504
> + guix git authenticate 9edb3f66fd807b096b48283debdcddccfea34bad 'BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA' --cache-key=test-24504 --stats --end=9549f0283a78fe36f2d4ff2a04ef8ad6b0c02604
> guix git: error: Git error: cannot locate remote-tracking branch 'keyring'
> FAIL tests/guix-git-authenticate.sh (exit status: 1)

It looks like your repo is missing a ‘keyring’ branch, which causes this
test failure.  Can you set up the branch as noted here:

  https://guix.gnu.org/manual/devel/en/html_node/Building-from-Git.html

and try again?

> FAIL: tests/guix-pack-relocatable
> =================================

[...]

> + guix pack -RR python-numpy python-scipy --no-grafts -n
> guix pack: error: profile contains conflicting entries for python-numpy
> guix pack: error:   first entry: python-numpy <at> 1.21.3 /gnu/store/9dd0zkkwl45rmsa7b6vjb1747l57aw4y-python-numpy-1.21.3R
> guix pack: error:   second entry: python-numpy <at> 1.20.3 /gnu/store/mlccgh05bf8cdinq0ilpvpdmsspq36pv-python-numpy-1.20.3R
> guix pack: error:    ... propagated from python-matplotlib <at> 3.4.3
> guix pack: error:    ... propagated from python-scipy <at> 1.6.0

[...]

>    314:42  3 (display-hint "Try upgrading both @code{python-numpy} ?" ?)
> In ice-9/boot-9.scm:
>   1747:15  2 (with-exception-handler #<procedure 7f5c9becbb10 at ic?> ?)
> In guix/build/syscalls.scm:
>   2282:35  1 (_)
>    2271:8  0 (terminal-window-size _)
>
> guix/build/syscalls.scm:2271:8: In procedure terminal-window-size:
> In procedure terminal-window-size: Inappropriate ioctl for device
> + chmod -Rf +w /tmp/tmp.L59DtouzZR
> + rm -rf /tmp/tmp.L59DtouzZR
> FAIL tests/guix-pack-relocatable.sh (exit status: 1)

Ah yes, this is a “known issue” since the recent merge.  We need to
adjust the test to use other packages or something.  To be continued…

Thanks,
Ludo’.

Message #20 received at 52708 <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 52708 <at> debbugs.gnu.org
Subject: [BUG] Guix checkout fails `make check`
Date: Wed, 05 Jan 2022 08:05:58 +0100

> + guix pack -RR python-numpy python-scipy --no-grafts -n
> guix pack: error: profile contains conflicting entries for python-numpy
> guix pack: error:   first entry: python-numpy <at> 1.21.3 /gnu/store/9dd0zkkwl45rmsa7b6vjb1747l57aw4y-python-numpy-1.21.3R
> guix pack: error:   second entry: python-numpy <at> 1.20.3 /gnu/store/mlccgh05bf8cdinq0ilpvpdmsspq36pv-python-numpy-1.20.3R
> guix pack: error:    ... propagated from python-matplotlib <at> 3.4.3
> guix pack: error:    ... propagated from python-scipy <at> 1.6.0

This should no longer be a problem as we’ve renamed python-numpy <at> 1.21 to
python-numpy-next.

-- 
Ricardo

Message #25 received at 52708-done <at> debbugs.gnu.org (full text, mbox):

From: Leo Famulari <leo <at> famulari.name>
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: 52708-done <at> debbugs.gnu.org
Subject: Re: bug#52708: [BUG] Guix checkout fails `make check`
Date: Wed, 5 Jan 2022 13:49:14 -0500

On Wed, Jan 05, 2022 at 08:05:58AM +0100, Ricardo Wurmus wrote:
> > + guix pack -RR python-numpy python-scipy --no-grafts -n
> > guix pack: error: profile contains conflicting entries for python-numpy
> > guix pack: error:   first entry: python-numpy <at> 1.21.3 /gnu/store/9dd0zkkwl45rmsa7b6vjb1747l57aw4y-python-numpy-1.21.3R
> > guix pack: error:   second entry: python-numpy <at> 1.20.3 /gnu/store/mlccgh05bf8cdinq0ilpvpdmsspq36pv-python-numpy-1.20.3R
> > guix pack: error:    ... propagated from python-matplotlib <at> 3.4.3
> > guix pack: error:    ... propagated from python-scipy <at> 1.6.0
> 
> This should no longer be a problem as we’ve renamed python-numpy <at> 1.21 to
> python-numpy-next.

Closing

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