GNU bug report logs - #54400
Emacs error in Ubuntu

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Package: guix; Reported by: Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN>; Keywords: moreinfo; dated Tue, 15 Mar 2022 16:16:02 UTC; Maintainer for guix is bug-guix@HIDDEN.

Added tag(s) moreinfo. Request was from Maxim Cournoyer <maxim.cournoyer@HIDDEN> to control <at> debbugs.gnu.org. Full text available.

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From: =?utf-8?Q?Ludovic_Court=C3=A8s?= <ludo@HIDDEN>
To: Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN>
Subject: Re: bug#54400: Emacs error in Ubuntu
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 (Vicente Mataix's message of "Tue, 15 Mar 2022 17:09:23 +0100 (CET)")
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Hi,

Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN> skribis:

> Run emacs:=20
>
> emacs=20
>
> /home/vmataixf/.guix-profile/bin/emacs: error while loading shared librar=
ies: liblzma.so.5: cannot open shared object file: No such file or director=
=20

Could you check whether the =E2=80=98LD_LIBRARY_PATH=E2=80=99 environment v=
ariable is
defined, for instance by running:

  env | grep LD_LIBRARY_PATH

If it is, please unset it:

  unset LD_LIBRARY_PATH

Does it help?

Ludo=E2=80=99.

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Subject: Re: bug#54400: Emacs error in Ubuntu
From: Liliana Marie Prikler <liliana.prikler@HIDDEN>
To: zimoun <zimon.toutoune@HIDDEN>, Vicente Mataix ferrandiz
 <vicente.mataix-ferrandiz@HIDDEN>, 54400 <at> debbugs.gnu.org
Date: Wed, 16 Mar 2022 11:30:35 +0100
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Hi zimoun,

Am Mittwoch, dem 16.03.2022 um 11:11 +0100 schrieb zimoun:
> I am not Vicente but mine looks like with Guix ff093f5 on Debian.
> 
> --8<---------------cut here---------------start------------->8---
> $ guix shell libxml2
> [env]$ ldd $GUIX_ENVIRONMENT/lib/libxml2.so | grep lzma
>         liblzma.so.5 => /gnu/store/aggsb6j1svxp70xlll4rqnx5f2pzz794-
> xz-5.2.5/lib/liblzma.so.5 (0x00007fee6026e000)
> --8<---------------cut here---------------end--------------->8---
> 
> and
> 
> --8<---------------cut here---------------start------------->8---
> $ guix shell emacs
> [env]$ ldd $GUIX_ENVIRONMENT/bin/.emacs-27.2-real | grep lzma
>         liblzma.so.5 => /gnu/store/c8isj4jq6knv0icfgr43di6q3nvdzkx7-
> xz-5.2.5/lib/liblzma.so.5 (0x00007f134d7e3000)
> --8<---------------cut here---------------end--------------->8---
Looking at the derivations,
/gnu/store/c8isj4jq6knv0icfgr43di6q3nvdzkx7-xz-5.2.5/ is built with all
our mesboot stuff, whereas /gnu/store/aggsb6j1svxp70xlll4rqnx5f2pzz794-
xz-5.2.5 is not.  In other words, I suspect that it is indeed
Schrödinger's missing dependency :P


Cheers

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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From: zimoun <zimon.toutoune@HIDDEN>
To: Liliana Marie Prikler <liliana.prikler@HIDDEN>, Vicente Mataix
 ferrandiz <vicente.mataix-ferrandiz@HIDDEN>, 54400 <at> debbugs.gnu.org
Subject: Re: bug#54400: Emacs error in Ubuntu
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Hi Liliana,

On Wed, 16 Mar 2022 at 10:48, Liliana Marie Prikler <liliana.prikler@HIDDEN=
graz.at> wrote:

> Vicente, could you check the output of ldd for your Emacs, as well as
> libxml2 and also check whether your xz package is perhaps broken and
> ought to be repaired?

I am not Vicente but mine looks like with Guix ff093f5 on Debian.

--8<---------------cut here---------------start------------->8---
$ guix shell libxml2
[env]$ ldd $GUIX_ENVIRONMENT/lib/libxml2.so | grep lzma
	liblzma.so.5 =3D> /gnu/store/aggsb6j1svxp70xlll4rqnx5f2pzz794-xz-5.2.5/lib=
/liblzma.so.5 (0x00007fee6026e000)
--8<---------------cut here---------------end--------------->8---

and

--8<---------------cut here---------------start------------->8---
$ guix shell emacs
[env]$ ldd $GUIX_ENVIRONMENT/bin/.emacs-27.2-real | grep lzma
	liblzma.so.5 =3D> /gnu/store/c8isj4jq6knv0icfgr43di6q3nvdzkx7-xz-5.2.5/lib=
/liblzma.so.5 (0x00007f134d7e3000)
--8<---------------cut here---------------end--------------->8---

Ah!  It is not the =E2=80=9Csame=E2=80=9C xz. :-) Well, it probably does no=
t come from
libxml2 (except if there is a graft).

Anyway, I suspect something wrong with Vicente=E2=80=99s =E2=80=99env=E2=80=
=99.


Cheers,
simon

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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From: Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN>
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Subject: Re: bug#54400: Emacs error in Ubuntu
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I did it just after guix pull. I cannot check the revision as I did it in m=
y work computer, I will check it tomorrow.

----- Mail original -----
> De: "zimoun" <zimon.toutoune@HIDDEN>
> =C0: "Vicente Mataix ferrandiz" <vicente.mataix-ferrandiz@HIDDEN>
> Cc: 54400 <at> debbugs.gnu.org
> Envoy=E9: Mercredi 16 Mars 2022 10:23:15
> Objet: Re: bug#54400: Emacs error in Ubuntu

> Hi Vicente,
>=20
> On Tue, 15 Mar 2022 at 22:18, Vicente Mataix ferrandiz
> <vicente.mataix-ferrandiz@HIDDEN> wrote:
>=20
>> Update:
>>
>> guix pull
>=20
> What is your revision?  Other said which "guix describe"?
>=20
>=20
> Cheers,
> simon

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Subject: Re: bug#54400: Emacs error in Ubuntu
From: Liliana Marie Prikler <liliana.prikler@HIDDEN>
To: zimoun <zimon.toutoune@HIDDEN>, Vicente Mataix ferrandiz
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Hi simon

Am Mittwoch, dem 16.03.2022 um 10:36 +0100 schrieb zimoun:
> --8<---------------cut here---------------start------------->8---
> $ guix graph --path emacs xz
> emacs@HIDDEN
> libxml2@HIDDEN
> xz@HIDDEN
> --8<---------------cut here---------------end--------------->8---
Thanks for investigating, I did not consider ‘guix graph’.

> Note that
> 
> --8<---------------cut here---------------start------------->8---
>     (source (origin
>               (method url-fetch)
>               (uri (string-append "mirror://gnu/emacs/emacs-"
>                                   version ".tar.xz"))
> --8<---------------cut here---------------end--------------->8---
> 
> but I do not see ’xz’ in the implicit inputs; only emacs-minimal. 
> Quick look, maybe I miss it.
IIRC, it'd be quite deep in the unpack chain, but maybe I'm mixing
things up as well.

> Well, indeed, something seems unexpected if the Emacs binary is
> linked to liblzma and this liblzma is not an explicit inputs but
> instead comes from a reference to another inputs.
I think that's what you'd observe on other distros as well.  IIRC the
linker ought to correctly resolve/"propagate" such dependencies, so it
shouldn't be a problem.

Vicente, could you check the output of ldd for your Emacs, as well as
libxml2 and also check whether your xz package is perhaps broken and
ought to be repaired?

Cheers

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Subject: Re: bug#54400: Emacs error in Ubuntu
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Hi,

On Wed, 16 Mar 2022 at 10:32, Vicente Mataix ferrandiz
<vicente.mataix-ferrandiz@HIDDEN> wrote:

> I did it just after guix pull.

Using bec806e from yesterday, I cannot reproduce on Ubuntu.  The invokation

    guix shell -C -E DSISPLAy -E TERM emacs --  emacs -nw

works for me.  I suspect something wrong with your environment
variables.  Maybe you could run "guix shell --check".

Cheers,
simon

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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From: zimoun <zimon.toutoune@HIDDEN>
To: Liliana Marie Prikler <liliana.prikler@HIDDEN>, Vicente Mataix
 ferrandiz <vicente.mataix-ferrandiz@HIDDEN>, 54400 <at> debbugs.gnu.org
Subject: Re: bug#54400: Emacs error in Ubuntu
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Hi Liliana.

On Wed, 16 Mar 2022 at 09:02, Liliana Marie Prikler <liliana.prikler@HIDDEN=
graz.at> wrote:

> --8<---------------cut here---------------start------------->8---
> $ ldd $GUIX_ENVIRONMENT/bin/.emacs-27.2-real | grep lzma
> 	liblzma.so.5 =3D> /gnu/store/c8isj4jq6knv0icfgr43di6q3nvdzkx7-xz-5.2.5/l=
ib/liblzma.so.5 (0x00007f7919fee000)
> --8<---------------cut here---------------end--------------->8---
>
> where xz is one of those magic libraries you'd expect to exist in any
> distro.  However,
>
> --8<---------------cut here---------------start------------->8---
> $ guix show emacs | recsel -p dependencies
> dependencies: acl@HIDDEN alsa-lib@HIDDEN cairo@HIDDEN coreutils@HIDDEN
> + dbus@HIDDEN ghostscript@HIDDEN giflib@HIDDEN gmp@HIDDEN gnutls@HIDDEN gpm=
@1.20.7
> + gtk+@3.24.30 gzip@HIDDEN harfbuzz@HIDDEN jansson@HIDDEN libice@HIDDEN
> + libjpeg-turbo@HIDDEN libotf@HIDDEN libpng@HIDDEN librsvg@HIDDEN libsm@1.=
2.3
> + libtiff@HIDDEN libx11@HIDDEN libxft@HIDDEN libxml2@HIDDEN libxpm@HIDDEN
> + m17n-lib@HIDDEN mailutils@HIDDEN ncurses@HIDDEN pango@HIDDEN
> + pkg-config@HIDDEN poppler@HIDDEN texinfo@HIDDEN zlib@HIDDEN
> --8<---------------cut here---------------end--------------->8---
>
> If at all, xz is included as implicit input to unpack Emacs!  We should
> probably add it as explicit input instead.

--8<---------------cut here---------------start------------->8---
$ guix graph --path emacs xz
emacs@HIDDEN
libxml2@HIDDEN
xz@HIDDEN
--8<---------------cut here---------------end--------------->8---

Note that

--8<---------------cut here---------------start------------->8---
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnu/emacs/emacs-"
                                  version ".tar.xz"))
--8<---------------cut here---------------end--------------->8---

but I do not see =E2=80=99xz=E2=80=99 in the implicit inputs; only emacs-mi=
nimal.  Quick
look, maybe I miss it.

Well, indeed, something seems unexpected if the Emacs binary is linked
to liblzma and this liblzma is not an explicit inputs but instead comes
from a reference to another inputs.


Cheers,
simon

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Subject: Re: bug#54400: Emacs error in Ubuntu
To: Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN>
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Hi Vicente,

On Tue, 15 Mar 2022 at 22:18, Vicente Mataix ferrandiz
<vicente.mataix-ferrandiz@HIDDEN> wrote:

> Update:
>
> guix pull

What is your revision?  Other said which "guix describe"?


Cheers,
simon

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

Message received at 54400 <at> debbugs.gnu.org:

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Hi Vicente,

Am Dienstag, dem 15.03.2022 um 17:09 +0100 schrieb Vicente Mataix
ferrandiz:
> Greetings,
> 
> I follow the instructions from:
> 
> https://guix.gnu.org/manual/en/guix.html#Binary-Installation
> 
> Installation (Ubuntu 20.04):
> 
> cd /tmp
> wget
> https://git.savannah.gnu.org/cgit/guix.git/plain/etc/guix-install.sh
> chmod +x guix-install.sh
> ./guix-install.sh
> guix install glibc-utf8-locales
> export GUIX_LOCPATH="$HOME/.guix-profile/lib/locale"
> 
> Update:
> 
> guix pull
> 
> Install emacs:
> 
> guix install emacs
> 
> Load environment:
> 
> GUIX_PROFILE="$HOME/.guix-profile"
>     . "$GUIX_PROFILE/etc/profile"
> 
> Run emacs:
> 
> emacs
> 
> /home/vmataixf/.guix-profile/bin/emacs: error while loading shared
> libraries: liblzma.so.5: cannot open shared object file: No such file
> or director
That is an interesting and surprisingly difficult to debug error you
have there.  On Guix System, we have
--8<---------------cut here---------------start------------->8---
$ ldd $GUIX_ENVIRONMENT/bin/.emacs-27.2-real | grep lzma
	liblzma.so.5 => /gnu/store/c8isj4jq6knv0icfgr43di6q3nvdzkx7-xz-5.2.5/lib/liblzma.so.5 (0x00007f7919fee000)
--8<---------------cut here---------------end--------------->8---
where xz is one of those magic libraries you'd expect to exist in any
distro.  However,

--8<---------------cut here---------------start------------->8---
$ guix show emacs | recsel -p dependencies
dependencies: acl@HIDDEN alsa-lib@HIDDEN cairo@HIDDEN coreutils@HIDDEN
+ dbus@HIDDEN ghostscript@HIDDEN giflib@HIDDEN gmp@HIDDEN gnutls@HIDDEN gpm@HIDDEN
+ gtk+@3.24.30 gzip@HIDDEN harfbuzz@HIDDEN jansson@HIDDEN libice@HIDDEN
+ libjpeg-turbo@HIDDEN libotf@HIDDEN libpng@HIDDEN librsvg@HIDDEN libsm@HIDDEN
+ libtiff@HIDDEN libx11@HIDDEN libxft@HIDDEN libxml2@HIDDEN libxpm@HIDDEN
+ m17n-lib@HIDDEN mailutils@HIDDEN ncurses@HIDDEN pango@HIDDEN
+ pkg-config@HIDDEN poppler@HIDDEN texinfo@HIDDEN zlib@HIDDEN
--8<---------------cut here---------------end--------------->8---

If at all, xz is included as implicit input to unpack Emacs!  We should
probably add it as explicit input instead.

Cheers

Information forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Greetings,=20

I follow the instructions from:=20

[ https://zimbra.inria.fr/zimbra/%20https://guix.gnu.org/manual/en/guix.htm=
l#Binary-Installation | https://guix.gnu.org/manual/en/guix.html#Binary-Ins=
tallation ]=20

Installation (Ubuntu 20.04):=20

cd /tmp=20
wget https://git.savannah.gnu.org/cgit/guix.git/plain/etc/guix-install.sh=
=20
chmod +x guix-install.sh=20
./guix-install.sh=20
guix install glibc-utf8-locales=20
export GUIX_LOCPATH=3D"$HOME/.guix-profile/lib/locale"=20

Update:=20

guix pull=20

Install emacs:=20

guix install emacs=20

Load environment:=20

GUIX_PROFILE=3D"$HOME/.guix-profile"=20
. "$GUIX_PROFILE/etc/profile"=20

Run emacs:=20

emacs=20

/home/vmataixf/.guix-profile/bin/emacs: error while loading shared librarie=
s: liblzma.so.5: cannot open shared object file: No such file or director=
=20

Best regards,=20

Vicente Mataix Ferr=E1ndiz=20

--=_55e65e1d-6485-4e1f-89d1-731da2dcfc44
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<html><body><div id=3D"zimbraEditorContainer" style=3D"font-family: arial, =
helvetica, sans-serif; font-size: 12pt; color: #000000" class=3D"2"><div>Gr=
eetings,<br data-mce-bogus=3D"1"></div><div><br>I follow the instructions f=
rom:<br><br><a data-mce-href=3D"%20https://guix.gnu.org/manual/en/guix.html=
#Binary-Installation" href=3D"%20https://guix.gnu.org/manual/en/guix.html#B=
inary-Installation">https://guix.gnu.org/manual/en/guix.html#Binary-Install=
ation</a><br><br>Installation (Ubuntu 20.04):<br><br><span style=3D"font-fa=
mily: courier new, courier, monaco, monospace, sans-serif;" data-mce-style=
=3D"font-family: courier new, courier, monaco, monospace, sans-serif;">cd /=
tmp</span><br><span style=3D"font-family: courier new, courier, monaco, mon=
ospace, sans-serif;" data-mce-style=3D"font-family: courier new, courier, m=
onaco, monospace, sans-serif;">wget https://git.savannah.gnu.org/cgit/guix.=
git/plain/etc/guix-install.sh</span><br><span style=3D"font-family: courier=
 new, courier, monaco, monospace, sans-serif;" data-mce-style=3D"font-famil=
y: courier new, courier, monaco, monospace, sans-serif;">chmod +x guix-inst=
all.sh</span><br><span style=3D"font-family: courier new, courier, monaco, =
monospace, sans-serif;" data-mce-style=3D"font-family: courier new, courier=
, monaco, monospace, sans-serif;">./guix-install.sh</span><br><span style=
=3D"font-family: courier new, courier, monaco, monospace, sans-serif;" data=
-mce-style=3D"font-family: courier new, courier, monaco, monospace, sans-se=
rif;">guix install glibc-utf8-locales</span><br><span style=3D"font-family:=
 courier new, courier, monaco, monospace, sans-serif;" data-mce-style=3D"fo=
nt-family: courier new, courier, monaco, monospace, sans-serif;">export GUI=
X_LOCPATH=3D"$HOME/.guix-profile/lib/locale"</span><br><br>Update:<br><br><=
span style=3D"font-family: courier new, courier, monaco, monospace, sans-se=
rif;" data-mce-style=3D"font-family: courier new, courier, monaco, monospac=
e, sans-serif;">guix pull</span><br><br>Install emacs:<br><br><span style=
=3D"font-family: courier new, courier, monaco, monospace, sans-serif;" data=
-mce-style=3D"font-family: courier new, courier, monaco, monospace, sans-se=
rif;">guix install emacs</span><br><br>Load environment:<br><br><span style=
=3D"font-family: courier new, courier, monaco, monospace, sans-serif;" data=
-mce-style=3D"font-family: courier new, courier, monaco, monospace, sans-se=
rif;">GUIX_PROFILE=3D"$HOME/.guix-profile"</span><br><span style=3D"font-fa=
mily: courier new, courier, monaco, monospace, sans-serif;" data-mce-style=
=3D"font-family: courier new, courier, monaco, monospace, sans-serif;">&nbs=
p;&nbsp;&nbsp;&nbsp;. "$GUIX_PROFILE/etc/profile"</span><br><br>Run emacs:<=
br><br><span style=3D"font-family: courier new, courier, monaco, monospace,=
 sans-serif;" data-mce-style=3D"font-family: courier new, courier, monaco, =
monospace, sans-serif;">emacs</span><br><br><span style=3D"font-family: cou=
rier new, courier, monaco, monospace, sans-serif;" data-mce-style=3D"font-f=
amily: courier new, courier, monaco, monospace, sans-serif;">/home/vmataixf=
/.guix-profile/bin/emacs: error while loading shared libraries: liblzma.so.=
5: cannot open shared object file: No such file or director</span><br><br>B=
est regards,<br><br>Vicente Mataix Ferr=E1ndiz<br data-mce-bogus=3D"1"></di=
v></div></body></html>
--=_55e65e1d-6485-4e1f-89d1-731da2dcfc44--

Acknowledgement sent to Vicente Mataix ferrandiz <vicente.mataix-ferrandiz@HIDDEN>:
New bug report received and forwarded. Copy sent to bug-guix@HIDDEN. Full text available.

Report forwarded to bug-guix@HIDDEN:
bug#54400; Package guix. Full text available.

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Copyright (C) 1999 Darren O. Benham, 1997 nCipher Corporation Ltd, 1994-97 Ian Jackson.