GNU bug report logs - #54934
[PATCH 0/4] Fix broken packages by PyYAML upgrade.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: guix-patches <at> gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 14 Apr 2022 13:08:49 +0200

Hi,

Currently, python-pyyaml-for-awscli is not used.  Its use had been removed by
commit 21cd4c704e.  Reuse the package to fix some others; waiting their
regular updates.

Note that the package orange is still broken.  Because
python-orange-canvas-core is broken.  However, note that:

--8<---------------cut here---------------start------------->8---
$ ./pre-inst-env guix graph --path python-orange-canvas-core python-pyyaml
python-orange-canvas-core <at> 0.1.24
python-qasync <at> 0.22.0
python-pyqt <at> 5.15.2
qtbase <at> 5.15.2
gtk+@3.24.30
rest <at> 0.8.1
libsoup-minimal <at> 2.72.0
samba <at> 4.15.3
python-markdown <at> 3.3.4
python-pyyaml <at> 6.0
--8<---------------cut here---------------end--------------->8---

and update it to 0.1.26 is not enough, for instance.


zimoun (4):
  gnu: python-pyyaml-for-awscli: Rename and hide.
  gnu: docker-compose: Use python-pyyaml <at> 5.
  gnu: conan: Use python-pyyaml <at> 5.
  gnu: ganeti: Use python-pyyaml <at> 5.

 gnu/packages/docker.scm             |  2 +-
 gnu/packages/package-management.scm |  2 +-
 gnu/packages/python-xyz.scm         | 24 +++++++++++++-----------
 gnu/packages/virtualization.scm     |  2 +-
 4 files changed, 16 insertions(+), 14 deletions(-)


base-commit: 7d990e775e76c0a898c7d4b53691d1932fc0e6eb
-- 
2.35.1

Message #8 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 54934 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 2/4] gnu: docker-compose: Use python-pyyaml <at> 5.
Date: Thu, 14 Apr 2022 13:10:37 +0200

* gnu/packages/docker.scm (docker-compose)[inputs]: Replace python-pyyaml by
python-pyyaml-5.
---
 gnu/packages/docker.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/docker.scm b/gnu/packages/docker.scm
index 3f52f4f8db..07731886ae 100644
--- a/gnu/packages/docker.scm
+++ b/gnu/packages/docker.scm
@@ -122,7 +122,7 @@ (define-public docker-compose
            python-docopt
            python-dotenv
            python-jsonschema
-           python-pyyaml
+           python-pyyaml-5
            python-requests
            python-six
            python-texttable
-- 
2.35.1

Message #11 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 54934 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 1/4] gnu: python-pyyaml-for-awscli: Rename and hide.
Date: Thu, 14 Apr 2022 13:10:36 +0200

* gnu/packages/python-xyz.scm (python-pyyaml-for-awscli): Rename variable to
'python-pyyaml-5', hide the package.
---
 gnu/packages/python-xyz.scm | 24 +++++++++++++-----------
 1 file changed, 13 insertions(+), 11 deletions(-)

diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 36e4fe5898..1938b2bfad 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -3941,17 +3941,19 @@ (define-public python2-pyyaml
           (base32
            "0pm440pmpvgv5rbbnm8hk4qga5a292kvlm1bh3x2nwr8pb5p8xv0")))))))
 
-(define-public python-pyyaml-for-awscli
-  (package
-    (inherit python-pyyaml)
-    (version "5.4.1")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (pypi-uri "PyYAML" version))
-       (sha256
-        (base32
-         "0pm440pmpvgv5rbbnm8hk4qga5a292kvlm1bh3x2nwr8pb5p8xv0"))))))
+;;; Required by some packages not yet updated.
+(define-public python-pyyaml-5
+  (hidden-package
+   (package
+     (inherit python-pyyaml)
+     (version "5.4.1")
+     (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "PyYAML" version))
+        (sha256
+         (base32
+          "0pm440pmpvgv5rbbnm8hk4qga5a292kvlm1bh3x2nwr8pb5p8xv0")))))))
 
 (define-public python-vine
   (package
-- 
2.35.1

Message #14 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 54934 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 3/4] gnu: conan: Use python-pyyaml <at> 5.
Date: Thu, 14 Apr 2022 13:10:38 +0200

* gnu/packages/package-management.scm (conan)[propagated-inputs]: Replace
python-pyyaml by python-yyaml-5.
---
 gnu/packages/package-management.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm
index 9c5db0d608..092aa159a3 100644
--- a/gnu/packages/package-management.scm
+++ b/gnu/packages/package-management.scm
@@ -1183,7 +1183,7 @@ (define system ,(or (%current-target-system)
            python-pluginbase
            python-pygments
            python-pyjwt
-           python-pyyaml
+           python-pyyaml-5
            python-requests
            python-six
            python-tqdm
-- 
2.35.1

Message #17 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: 54934 <at> debbugs.gnu.org
Cc: zimoun <zimon.toutoune <at> gmail.com>
Subject: [PATCH 4/4] gnu: ganeti: Use python-pyyaml <at> 5.
Date: Thu, 14 Apr 2022 13:10:39 +0200

* gnu/packages/virtualization.scm (ganeti)[native-inputs]: Replace
python-pyyaml by python-pyyaml-5.
---
 gnu/packages/virtualization.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index f3396e7c94..bc2523d8ec 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -830,7 +830,7 @@ (define* (wrap? file #:rest _)
        ("ghc-test-framework-hunit" ,ghc-test-framework-hunit)
        ("ghc-test-framework-quickcheck2" ,ghc-test-framework-quickcheck2)
        ("python-mock" ,python-mock)
-       ("python-pyyaml" ,python-pyyaml)
+       ("python-pyyaml" ,python-pyyaml-5)
        ("openssh" ,openssh)
        ("procps" ,procps)
        ("shelltestrunner" ,shelltestrunner)
-- 
2.35.1

Message #20 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: 54934 <at> debbugs.gnu.org
Subject: Re: [bug#54934] [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 14 Apr 2022 15:19:45 +0200

zimoun <zimon.toutoune <at> gmail.com> writes:

> Note that the package orange is still broken.  Because
> python-orange-canvas-core is broken.

I don’t understand.  It builds just fine here.  I tested on commit
b0dd06bd0caea46a852248ab48ab2e6aaff57752.

How is it broken?

-- 
Ricardo

Message #23 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: 54934 <at> debbugs.gnu.org
Subject: Re: [bug#54934] [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 14 Apr 2022 15:28:07 +0200

On Thu, 14 Apr 2022 at 15:20, Ricardo Wurmus <rekado <at> elephly.net> wrote:

> > Note that the package orange is still broken.  Because
> > python-orange-canvas-core is broken.
>
> I don’t understand.  It builds just fine here.  I tested on commit
> b0dd06bd0caea46a852248ab48ab2e6aaff57752.

I have not tested on this one since it is very recent ;-)

CommitDate: Thu Apr 14 14:53:17 2022 +0200

but it fails with 7d990e775e76c0a898c7d4b53691d1932fc0e6eb.


> How is it broken?

Like this <https://ci.guix.gnu.org/build/644998/details>


Cheers,
simon

Message #26 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: 54934 <at> debbugs.gnu.org
Subject: Re: [bug#54934] [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 14 Apr 2022 16:00:49 +0200

zimoun <zimon.toutoune <at> gmail.com> writes:

> On Thu, 14 Apr 2022 at 15:20, Ricardo Wurmus <rekado <at> elephly.net> wrote:
>
>> > Note that the package orange is still broken.  Because
>> > python-orange-canvas-core is broken.
>>
>> I don’t understand.  It builds just fine here.  I tested on commit
>> b0dd06bd0caea46a852248ab48ab2e6aaff57752.
>
> I have not tested on this one since it is very recent ;-)
>
> CommitDate: Thu Apr 14 14:53:17 2022 +0200
>
> but it fails with 7d990e775e76c0a898c7d4b53691d1932fc0e6eb.
>
>
>> How is it broken?
>
> Like this <https://ci.guix.gnu.org/build/644998/details>

I cannot reproduce this.  I also ran “guix build
/gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv” on ci.guix.gnu.org to
see if I can reproduce the failure there, but it succeeded.

-- 
Ricardo

Message #29 received at 54934 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: Ricardo Wurmus <rekado <at> elephly.net>
Cc: 54934 <at> debbugs.gnu.org
Subject: Re: [bug#54934] [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 14 Apr 2022 17:07:05 +0200

Hi,

On Thu, 14 Apr 2022 at 16:00, Ricardo Wurmus <rekado <at> elephly.net> wrote:

> I cannot reproduce this.  I also ran “guix build
> /gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv” on ci.guix.gnu.org to
> see if I can reproduce the failure there, but it succeeded.

Well, it is orthogonal with the submission, but for the record:

--8<---------------cut here---------------start------------->8---
$ guix build /gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv\
     --no-grafts --check

[...]

test_context_menu_delete (orangecanvas.canvas.items.tests.test_graphicstextitem.TestGraphicsTextItem) ... Traceback (most recent call last):
  File "/tmp/guix-build-python-orange-canvas-core-0.1.24.drv-0/orange-canvas-core-0.1.24/orangecanvas/canvas/items/graphicstextitem.py", line 137, in contextMenuEvent
    QGraphicsTextItem_contextMenuEvent(self, event)
  File "/tmp/guix-build-python-orange-canvas-core-0.1.24.drv-0/orange-canvas-core-0.1.24/orangecanvas/canvas/items/graphicstextitem.py", line 144, in QGraphicsTextItem_contextMenuEvent
    menu = createStandardContextMenu(self, event.pos(), event.widget())
  File "/tmp/guix-build-python-orange-canvas-core-0.1.24.drv-0/orange-canvas-core-0.1.24/orangecanvas/canvas/items/graphicstextitem.py", line 290, in createStandardContextMenu
    enabled=canPaste(),
  File "/tmp/guix-build-python-orange-canvas-core-0.1.24.drv-0/orange-canvas-core-0.1.24/orangecanvas/canvas/items/graphicstextitem.py", line 187, in canPaste
    return mime.hasFormat("text/plain") or mime.hasFormat("text/html")
AttributeError: 'NoneType' object has no attribute 'hasFormat'
error: in phase 'check': uncaught exception:
%exception #<&invoke-error program: "python" arguments: ("-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "test") exit-status: #f term-signal: 6 stop-signal: #f> 
phase `check' failed after 1.6 seconds
command "python" "-c" "import setuptools, tokenize;__file__='setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\\r\\n', '\\n');f.close();exec(compile(code, __file__, 'exec'))" "test" failed with signal 6
builder for `/gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv' failed with exit code 1
build of /gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv failed
View build log at '/var/log/guix/drvs/aj/4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv.bz2'.
guix build: error: build of `/gnu/store/aj4xvw8shwjq9qpyfbswb71jk7axf26h-python-orange-canvas-core-0.1.24.drv' failed
--8<---------------cut here---------------end--------------->8---


Cheers,
simon

Message #34 received at 54934-done <at> debbugs.gnu.org (full text, mbox):

From: Ludovic Courtès <ludo <at> gnu.org>
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: rekado <at> elephly.net, 54934-done <at> debbugs.gnu.org
Subject: Re: bug#54934: [PATCH 0/4] Fix broken packages by PyYAML upgrade.
Date: Thu, 28 Apr 2022 00:11:13 +0200

Hi,

zimoun <zimon.toutoune <at> gmail.com> skribis:

>   gnu: python-pyyaml-for-awscli: Rename and hide.
>   gnu: docker-compose: Use python-pyyaml <at> 5.
>   gnu: conan: Use python-pyyaml <at> 5.
>   gnu: ganeti: Use python-pyyaml <at> 5.

I had to adjust the first one (since python-pyyaml-for-awscli was
removed recently) and drop the last one (since ganeti was fixed in the
meantime), but at last the remaining 3 patches are now applied.

Thanks, and apologies for the delay!

Ludo’.

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