GNU bug report logs -
#56035
[PATCH] gnu: Add r-anaquin.
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Report forwarded
to
rekado <at> elephly.net, guix-patches <at> gnu.org
:
bug#56035
; Package
guix-patches
.
(Fri, 17 Jun 2022 09:43:02 GMT)
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Acknowledgement sent
to
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
New bug report received and forwarded. Copy sent to
rekado <at> elephly.net, guix-patches <at> gnu.org
.
(Fri, 17 Jun 2022 09:43:02 GMT)
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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..2b7f736dfa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1987,6 +1987,36 @@ (define-public r-agimicrorna
objects are used so that other packages could be used as well.")
(license license:gpl3)))
+(define-public r-anaquin
+ (package
+ (name "r-anaquin")
+ (version "2.20.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Anaquin" version))
+ (sha256
+ (base32
+ "1jgpnls2djl1yzvnk64qc83mljmlci7wflwkza3wr0sv6r47b0dd"))))
+ (properties `((upstream-name . "Anaquin")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-deseq2
+ r-ggplot2
+ r-knitr
+ r-locfit
+ r-plyr
+ r-qvalue
+ r-rocr))
+ (native-inputs (list r-knitr))
+ (home-page "https://www.sequinstandards.com/")
+ (synopsis "Statistical analysis of sequins")
+ (description
+ "The project is intended to support the use of @dfn{sequins}(synthetic
+sequencing spike-in controls) owned and made available by the Garvan Institute
+of Medical Research. The goal is to provide a standard open source library for
+quantitative analysis, modelling and visualization of spike-in controls.")
+ (license license:bsd-3)))
+
(define-public r-aneufinder
(package
(name "r-aneufinder")
base-commit: ef2d908e22f9d4f4a89782766b67d425935ae4eb
--
2.36.1
Reply sent
to
Ricardo Wurmus <rekado <at> elephly.net>
:
You have taken responsibility.
(Fri, 01 Jul 2022 08:26:01 GMT)
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Notification sent
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Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
bug acknowledged by developer.
(Fri, 01 Jul 2022 08:26:02 GMT)
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Message #10 received at 56035-done <at> debbugs.gnu.org (full text, mbox):
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de> writes:
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..2b7f736dfa 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -1987,6 +1987,36 @@ (define-public r-agimicrorna
> objects are used so that other packages could be used as well.")
> (license license:gpl3)))
>
> +(define-public r-anaquin
Thanks. I applied it with a commit message.
--
Ricardo
bug archived.
Request was from
Debbugs Internal Request <help-debbugs <at> gnu.org>
to
internal_control <at> debbugs.gnu.org
.
(Fri, 29 Jul 2022 11:24:06 GMT)
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This bug report was last modified 1 year and 243 days ago.
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