GNU bug report logs -
#56036
[PATCH] gnu: Add r-anf.
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Report forwarded
to
rekado <at> elephly.net, guix-patches <at> gnu.org
:
bug#56036
; Package
guix-patches
.
(Fri, 17 Jun 2022 09:55:02 GMT)
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Acknowledgement sent
to
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
New bug report received and forwarded. Copy sent to
rekado <at> elephly.net, guix-patches <at> gnu.org
.
(Fri, 17 Jun 2022 09:55:02 GMT)
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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..abdca11897 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,34 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-anf
+ (package
+ (name "r-anf")
+ (version "1.18.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ANF" version))
+ (sha256
+ (base32
+ "1fa2pbdapymrpz01ws0m2fbzf11d723x6rbsys29v06is57f5lpj"))))
+ (properties `((upstream-name . "ANF")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-igraph
+ r-mass
+ r-rcolorbrewer
+ r-survival))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/ANF")
+ (synopsis "Affinity network fusion for complex patient clustering")
+ (description
+ "The package @dfn{ANF}(Affinity Network Fusion) provides methods for affinity
+matrix construction and fusion as well as spectral clustering. This package is
+used for complex patient clustering by integrating multi-omic data through affinity
+network fusion.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")
base-commit: ef2d908e22f9d4f4a89782766b67d425935ae4eb
--
2.36.1
Reply sent
to
Ricardo Wurmus <rekado <at> elephly.net>
:
You have taken responsibility.
(Fri, 01 Jul 2022 08:26:02 GMT)
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Notification sent
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Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
bug acknowledged by developer.
(Fri, 01 Jul 2022 08:26:02 GMT)
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Message #10 received at 56036-done <at> debbugs.gnu.org (full text, mbox):
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de> writes:
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..abdca11897 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -2029,6 +2029,34 @@ (define-public r-aneufinder
> sequencing data.")
> (license license:artistic2.0)))
>
> +(define-public r-anf
Thanks. I applied it with a commit message.
--
Ricardo
bug archived.
Request was from
Debbugs Internal Request <help-debbugs <at> gnu.org>
to
internal_control <at> debbugs.gnu.org
.
(Fri, 29 Jul 2022 11:24:07 GMT)
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This bug report was last modified 1 year and 272 days ago.
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