GNU bug report logs -
#56143
[PATCH] gnu: Add r-asgsca.
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guix-patches <at> gnu.org
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bug#56143
; Package
guix-patches
.
(Wed, 22 Jun 2022 14:08:01 GMT)
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Acknowledgement sent
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Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
New bug report received and forwarded. Copy sent to
guix-patches <at> gnu.org
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(Wed, 22 Jun 2022 14:08:01 GMT)
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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
* gnu/packages/bioconductor.scm (r-asgsca): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..fba3004e8d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,30 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-asgsca
+ (package
+ (name "r-asgsca")
+ (version "1.30.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ASGSCA" version))
+ (sha256
+ (base32
+ "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+ (properties `((upstream-name . "ASGSCA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-mass r-matrix))
+ (home-page "https://bioconductor.org/packages/ASGSCA")
+ (synopsis
+ "Analysis of the associations between multiple genotypes and multiple traits")
+ (description
+ "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior biological
+knowledge. Genes, and clinical pathways are incorporated in the model as latent
+variables.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")
base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9
--
2.36.1
Reply sent
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Ricardo Wurmus <rekado <at> elephly.net>
:
You have taken responsibility.
(Mon, 31 Oct 2022 20:43:01 GMT)
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Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
bug acknowledged by developer.
(Mon, 31 Oct 2022 20:43:02 GMT)
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Message #10 received at 56143-done <at> debbugs.gnu.org (full text, mbox):
Applied, thanks!
--
Ricardo
bug archived.
Request was from
Debbugs Internal Request <help-debbugs <at> gnu.org>
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internal_control <at> debbugs.gnu.org
.
(Tue, 29 Nov 2022 12:24:07 GMT)
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This bug report was last modified 1 year and 119 days ago.
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