GNU bug report logs -
#57485
[PATCH] gnu: r-dyngen: Update to 1.0.4.
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Report forwarded
to
rekado <at> elephly.net, guix-patches <at> gnu.org
:
bug#57485
; Package
guix-patches
.
(Tue, 30 Aug 2022 10:46:02 GMT)
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Acknowledgement sent
to
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
New bug report received and forwarded. Copy sent to
rekado <at> elephly.net, guix-patches <at> gnu.org
.
(Tue, 30 Aug 2022 10:46:02 GMT)
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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):
* gnu/packages/bioinformatics.scm (r-dyngnen): Update to 1.0.4.
[source]: Change to cran-uri source.
---
gnu/packages/bioinformatics.scm | 76 ++++++++++++++++-----------------
1 file changed, 36 insertions(+), 40 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2bae609614..89e5dd645f 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11592,47 +11592,43 @@ (define-public biobambam2
(license license:gpl3+)))
(define-public r-dyngen
- (let ((commit "37fd1798fcbd41093fb3d7775bb2d268e2fc82b6")
- (revision "1"))
- (package
- (name "r-dyngen")
- (version (git-version "1.0.3" revision commit))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/dynverse/dyngen")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32 "05pr6v1b8yji1jnj3fwx0crmg8ay6yy6lp9qjmcyvhkwbmf3kvc7"))))
- (properties `((upstream-name . "dyngen")))
- (build-system r-build-system)
- (propagated-inputs
- (list r-assertthat
- r-dplyr
- r-dynutils
- r-ggplot2
- r-ggraph
- r-ggrepel
- r-gillespiessa2
- r-igraph
- r-lmds
- r-matrix
- r-patchwork
- r-pbapply
- r-purrr
- r-rlang
- r-tibble
- r-tidygraph
- r-tidyr
- r-viridis))
- (home-page "https://github.com/dynverse/dyngen")
- (synopsis "Multi-Modal simulator for single-cell omics analyses")
- (description
- "This package provides a multi-modal simulation engine for studying
+ (package
+ (name "r-dyngen")
+ (version "1.0.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "dyngen" version))
+ (sha256
+ (base32
+ "1qmqy0dyiz30zpf3ii4h2ip6hg2449ghb474sjzrqa1yk9mdpy4i"))))
+ (properties `((upstream-name . "dyngen")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-assertthat
+ r-dplyr
+ r-dynutils
+ r-ggplot2
+ r-ggraph
+ r-ggrepel
+ r-gillespiessa2
+ r-igraph
+ r-lmds
+ r-matrix
+ r-patchwork
+ r-pbapply
+ r-purrr
+ r-rlang
+ r-tibble
+ r-tidygraph
+ r-tidyr
+ r-viridis))
+ (home-page "https://github.com/dynverse/dyngen")
+ (synopsis "Multi-Modal simulator for single-cell omics analyses")
+ (description
+ "This package provides a multi-modal simulation engine for studying
dynamic cellular processes at single-cell resolution.")
- (license license:expat))))
+ (license license:expat)))
;; Needed for r-liana
(define-public r-omnipathr/devel
base-commit: 47c11772dfe840a536ed7ec438fe832878f51054
--
2.37.2
Reply sent
to
Ricardo Wurmus <rekado <at> elephly.net>
:
You have taken responsibility.
(Tue, 30 Aug 2022 21:07:02 GMT)
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Notification sent
to
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de>
:
bug acknowledged by developer.
(Tue, 30 Aug 2022 21:07:02 GMT)
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Message #10 received at 57485-done <at> debbugs.gnu.org (full text, mbox):
Mădălin Ionel Patrașcu <madalinionel.patrascu <at> mdc-berlin.de> writes:
> * gnu/packages/bioinformatics.scm (r-dyngnen): Update to 1.0.4.
> [source]: Change to cran-uri source.
Applied, thanks!
--
Ricardo
bug archived.
Request was from
Debbugs Internal Request <help-debbugs <at> gnu.org>
to
internal_control <at> debbugs.gnu.org
.
(Wed, 28 Sep 2022 11:24:09 GMT)
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This bug report was last modified 1 year and 182 days ago.
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