GNU bug report logs - #61230
[PATCH 1/2] gnu: Add python-pegasusio.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH 1/2] gnu: Add python-pegasusio.
Date: Thu, 2 Feb 2023 17:00:22 +0100

* gnu/packages/bioinformatics.scm (python-pegasusio): New variable.
---
 gnu/packages/bioinformatics.scm | 30 ++++++++++++++++++++++++++++++
 1 file changed, 30 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 714db27c16..6caf0e4cfa 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1136,6 +1136,36 @@ (define-public python-htsget
 servers supporting the protocol.")
    (license license:asl2.0)))
 
+(define-public python-pegasusio
+  (package
+    (name "python-pegasusio")
+    (version "0.7.1")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "pegasusio" version))
+              (sha256
+               (base32
+                "0gqygspdy398vjymdy6756jmk99s7fhwav9rivdx59kpqjcdxaz9"))))
+    (build-system pyproject-build-system)
+    (propagated-inputs (list python-anndata
+                             python-docopt
+                             python-h5py
+                             python-importlib-metadata
+                             python-loompy
+                             python-natsort
+                             python-numpy
+                             python-pandas
+                             python-pillow
+                             python-scipy
+                             python-zarr))
+    (native-inputs (list python-cython python-setuptools-scm))
+    (home-page "https://github.com/lilab-bcb/pegasusio")
+    (synopsis
+     "Pegasusio is a Python package for reading or writing single-cell genomics data")
+    (description
+     "Pegasusio is a Python package for reading or writing single-cell genomics data.")
+    (license license:bsd-3)))
+
 (define-public python-phylophlan
   (package
     (name "python-phylophlan")
-- 
2.34.1

Message #10 received at 61230-done <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 61230-done <at> debbugs.gnu.org
Subject: [PATCH 1/2] gnu: Add python-pegasusio.
Date: Fri, 03 Feb 2023 00:25:56 +0100

Applied, thank you!

-- 
Ricardo

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