GNU bug report logs - #61329
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Package: guix;

Reported by: Michela Francesconi <michelafrancesconi8 <at> gmail.com>

Date: Mon, 6 Feb 2023 17:50:02 UTC

Severity: normal

Tags: notabug

Done: Simon Tournier <zimon.toutoune <at> gmail.com>

Bug is archived. No further changes may be made.

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Report forwarded to bug-guix <at> gnu.org:
bug#61329; Package guix. (Mon, 06 Feb 2023 17:50:02 GMT) Full text and rfc822 format available.

Acknowledgement sent to Michela Francesconi <michelafrancesconi8 <at> gmail.com>:
New bug report received and forwarded. Copy sent to bug-guix <at> gnu.org. (Mon, 06 Feb 2023 17:50:02 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Michela Francesconi <michelafrancesconi8 <at> gmail.com>
To: bug-guix <at> gnu.org
Subject: Info
Date: Mon, 6 Feb 2023 14:36:30 +0100
[Message part 1 (text/plain, inline)]
Hello,

I am using an ssh account that connects to an external server, i have
downloaded through guix some software like samtools and bedtools but when i
try to use them in my directory it gives me this error:

-bash: samtools: command not found

In my direcory, however, there is the directry guix.profile and if I go
into the bin folder of this, I have everything I downloaded and if I run:

./samtools

In that direcory, I can see it and works. But how I can use that software
packages in another folder? I try with:

PATH=$PATH:~/home/hub_galli/mfrancesconi/.guix-profile/bin export PATH

But it doesn't work. What I'm doing wrong? You can help me?


Thank you and best regards

Michela
[Message part 2 (text/html, inline)]

Information forwarded to bug-guix <at> gnu.org:
bug#61329; Package guix. (Wed, 08 Feb 2023 10:10:01 GMT) Full text and rfc822 format available.

Message #8 received at 61329 <at> debbugs.gnu.org (full text, mbox):

From: Parnikkapore <poomklao <at> yahoo.com>
To: 61329 <at> debbugs.gnu.org
Subject: Info
Date: Wed, 08 Feb 2023 10:07:40 +0000
Hello, and welcome to Guix!

The "proper" way to run software installed using Guix is to activate the Guix profile; see https://guix.gnu.org/manual/en/html_node/Getting-Started.html for details. This sets $PATH for you, along with other environment variables that make sure e.g. new man pages can be found.

For setting $PATH manually, "~" is a shorthand for your home directory, so one of these two should work:

a)
PATH=$PATH:/home/hub_galli/mfrancesconi/.guix-profile/bin
export PATH

b)
PATH=$PATH:~/.guix-profile/bin
export PATH

Hope this helps!




Information forwarded to bug-guix <at> gnu.org:
bug#61329; Package guix. (Wed, 08 Feb 2023 14:46:02 GMT) Full text and rfc822 format available.

Message #11 received at 61329 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: Michela Francesconi <michelafrancesconi8 <at> gmail.com>
Cc: 61329 <at> debbugs.gnu.org
Subject: Re: bug#61329: Info
Date: Wed, 08 Feb 2023 14:57:57 +0100
Hi,

On lun., 06 févr. 2023 at 14:36, Michela Francesconi <michelafrancesconi8 <at> gmail.com> wrote:

> But it doesn't work. What I'm doing wrong? You can help me?

Welcome!

The purpose of the email list help-guix <at> gnu.org is for getting help.
Maybe it would be more suitable for asking help instead of reporting a
bug. :-)

I hope the message by Parnikkapore is answering your question.

Well, what do you think if this report is closed and instead the
discussion is happening in help-guix <at> gnu.org?  Since I am missing if it
is related to a bug. ;-)

Cheers,
simon




Added tag(s) notabug. Request was from Simon Tournier <zimon.toutoune <at> gmail.com> to control <at> debbugs.gnu.org. (Tue, 14 Feb 2023 19:26:03 GMT) Full text and rfc822 format available.

bug closed, send any further explanations to 61329 <at> debbugs.gnu.org and Michela Francesconi <michelafrancesconi8 <at> gmail.com> Request was from Simon Tournier <zimon.toutoune <at> gmail.com> to control <at> debbugs.gnu.org. (Tue, 14 Feb 2023 19:26:03 GMT) Full text and rfc822 format available.

bug archived. Request was from Debbugs Internal Request <help-debbugs <at> gnu.org> to internal_control <at> debbugs.gnu.org. (Wed, 15 Mar 2023 11:24:06 GMT) Full text and rfc822 format available.

This bug report was last modified 1 year and 14 days ago.

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