GNU bug report logs - #61381
[PATCH] gnu: tetoolkit: Update to 2.2.1b.

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Package: guix-patches;

Reported by: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>

Date: Thu, 9 Feb 2023 08:11:01 UTC

Severity: normal

Tags: patch

Done: zimoun <zimon.toutoune <at> gmail.com>

Bug is archived. No further changes may be made.

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Report forwarded to guix-patches <at> gnu.org:
bug#61381; Package guix-patches. (Thu, 09 Feb 2023 08:11:01 GMT) Full text and rfc822 format available.

Acknowledgement sent to Navid Afkhami <navid.afkhami <at> mdc-berlin.de>:
New bug report received and forwarded. Copy sent to guix-patches <at> gnu.org. (Thu, 09 Feb 2023 08:11:01 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: tetoolkit: Update to 2.2.1b.
Date: Thu, 9 Feb 2023 09:09:38 +0100
* gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b.
---
 gnu/packages/bioinformatics.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 78979eea0d..155ce81083 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2836,7 +2836,7 @@ (define-public tetoolkit
                 (string-append "'" (search-input-file inputs "bin/sort") " "))
                (("'rm -f ")
                 (string-append "'" (search-input-file inputs "bin/rm") " -f "))
-               (("'Rscript'")
+`               (("'Rscript'")
                 (string-append "'" (search-input-file inputs "bin/Rscript")
                                "'")))
              (substitute* "TEToolkit/IO/ReadInputs.py"
-- 
2.34.1





Information forwarded to guix-patches <at> gnu.org:
bug#61381; Package guix-patches. (Thu, 09 Feb 2023 12:44:03 GMT) Full text and rfc822 format available.

Message #8 received at 61381 <at> debbugs.gnu.org (full text, mbox):

From: zimoun <zimon.toutoune <at> gmail.com>
To: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>, 61381 <at> debbugs.gnu.org
Subject: Re: [bug#61381] [PATCH] gnu: tetoolkit: Update to 2.2.1b.
Date: Thu, 09 Feb 2023 13:31:38 +0100
Hi,

On Thu, 09 Feb 2023 at 09:09, Navid Afkhami <navid.afkhami <at> mdc-berlin.de> wrote:
> * gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b.

[...]

> -               (("'Rscript'")
> +`               (("'Rscript'")

What’s the change here?


Cheers,
simon




Information forwarded to guix-patches <at> gnu.org:
bug#61381; Package guix-patches. (Thu, 09 Feb 2023 12:53:02 GMT) Full text and rfc822 format available.

Message #11 received at 61381 <at> debbugs.gnu.org (full text, mbox):

From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: zimoun <zimon.toutoune <at> gmail.com>
Cc: "61381 <at> debbugs.gnu.org" <61381 <at> debbugs.gnu.org>
Subject: Re: [ext] Re: [bug#61381] [PATCH] gnu: tetoolkit: Update to
 2.2.1b.
Date: Thu, 9 Feb 2023 13:51:49 +0100
[Message part 1 (text/plain, inline)]
Hi,

Thank you for your Email. Probably it happened when i was doing a local commit (Sending a GUIX package). Please ignore it!
Thank you
Navid Afkhami
IT Administration

navid.afkhami <at> mdc-berlin.de (mailto:navid.afkhami <at> mdc-berlin.de)

On Feb 9 2023, at 1:31 pm, zimoun <zimon.toutoune <at> gmail.com> wrote:
> Hi,
>
> On Thu, 09 Feb 2023 at 09:09, Navid Afkhami <navid.afkhami <at> mdc-berlin.de> wrote:
> > * gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b.
>
> [...]
> > - (("'Rscript'")
> > +` (("'Rscript'")
>
> What’s the change here?
>
> Cheers,
> simon
>

[Message part 2 (text/html, inline)]

Information forwarded to guix-patches <at> gnu.org:
bug#61381; Package guix-patches. (Thu, 09 Feb 2023 13:01:02 GMT) Full text and rfc822 format available.

Message #14 received at 61381 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
Cc: "61381 <at> debbugs.gnu.org" <61381 <at> debbugs.gnu.org>
Subject: Re: [ext] Re: [bug#61381] [PATCH] gnu: tetoolkit: Update to 2.2.1b.
Date: Thu, 9 Feb 2023 14:00:41 +0100
[Message part 1 (text/plain, inline)]
Hi,

On Thu, 9 Feb 2023 at 13:51, Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
wrote:

> Thank you for your Email. Probably it happened when i was doing a local
commit (Sending a GUIX package). Please ignore it!

No worry.  The change is an extra backquote and I was not sure to
understand if it was expected.  Hence my quesiton. :-)
Anway.

I am closing this.  Thanks for your other contributions.

Cheers,
simon
[Message part 2 (text/html, inline)]

bug closed, send any further explanations to 61381 <at> debbugs.gnu.org and Navid Afkhami <navid.afkhami <at> mdc-berlin.de> Request was from zimoun <zimon.toutoune <at> gmail.com> to control <at> debbugs.gnu.org. (Thu, 09 Feb 2023 13:01:02 GMT) Full text and rfc822 format available.

bug archived. Request was from Debbugs Internal Request <help-debbugs <at> gnu.org> to internal_control <at> debbugs.gnu.org. (Fri, 10 Mar 2023 12:24:11 GMT) Full text and rfc822 format available.

This bug report was last modified 1 year and 18 days ago.

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