GNU bug report logs - #61575
[PATCH] gnu: r-doubletcollection: Update to (git-version 1.1.0 revision commit).

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Package: guix-patches;

Reported by: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>

Date: Fri, 17 Feb 2023 15:04:02 UTC

Severity: normal

Tags: patch

Done: Ricardo Wurmus <rekado <at> elephly.net>

Bug is archived. No further changes may be made.

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Report forwarded to guix-patches <at> gnu.org:
bug#61575; Package guix-patches. (Fri, 17 Feb 2023 15:04:02 GMT) Full text and rfc822 format available.

Acknowledgement sent to Navid Afkhami <navid.afkhami <at> mdc-berlin.de>:
New bug report received and forwarded. Copy sent to guix-patches <at> gnu.org. (Fri, 17 Feb 2023 15:04:02 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Navid Afkhami <navid.afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Subject: [PATCH] gnu: r-doubletcollection: Update to (git-version 1.1.0
 revision commit).
Date: Fri, 17 Feb 2023 16:02:52 +0100
* gnu/packages/bioinformatics.scm (r-doubletcollection): Update to (git-version 1.1.0 revision commit).
[propagated-inputs]: Add r-minimal, python, python-scrublet, and python-doubletdetection.
---
 gnu/packages/bioinformatics.scm | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9470e6eb1a..515e390fa1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8488,7 +8488,11 @@ (define-public r-doubletcollection
                                r-seurat
                                r-singlecellexperiment
                                r-slingshot
-                               r-summarizedexperiment))
+                               r-summarizedexperiment
+                               r-minimal
+                               python
+                               python-scrublet
+                               python-doubletdetection))
       (home-page "https://github.com/xnnba1984/DoubletCollection")
       (synopsis "Tool for finding doublets in scRNA-seq data")
       (description
-- 
2.34.1





Reply sent to Ricardo Wurmus <rekado <at> elephly.net>:
You have taken responsibility. (Mon, 06 Mar 2023 07:34:01 GMT) Full text and rfc822 format available.

Notification sent to Navid Afkhami <navid.afkhami <at> mdc-berlin.de>:
bug acknowledged by developer. (Mon, 06 Mar 2023 07:34:01 GMT) Full text and rfc822 format available.

Message #10 received at 61575-done <at> debbugs.gnu.org (full text, mbox):

From: Ricardo Wurmus <rekado <at> elephly.net>
To: 61575-done <at> debbugs.gnu.org
Subject: [PATCH] gnu: r-doubletcollection: Add missing inputs
Date: Mon, 06 Mar 2023 08:32:16 +0100
I’ve removed r-minimal from the packages and changed the commit message
before pushing it.

Thanks!

-- 
Ricardo




bug archived. Request was from Debbugs Internal Request <help-debbugs <at> gnu.org> to internal_control <at> debbugs.gnu.org. (Mon, 03 Apr 2023 11:24:09 GMT) Full text and rfc822 format available.

This bug report was last modified 360 days ago.

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