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bug-guix@HIDDEN:bug#65446; Package guix.
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[51.222.13.224]) by smtp.gmail.com with ESMTPSA id af79cd13be357-7b7048caeb4sm376548585a.115.2024.12.17.18.06.03 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Tue, 17 Dec 2024 18:06:06 -0800 (PST) From: Maxim Cournoyer <maxim.cournoyer@HIDDEN> To: "Collin J. Doering" via Bug reports for GNU Guix <bug-guix@HIDDEN> Subject: Re: bug#65446: [berlin] guix gc throws: "error: build daemon out of memory" In-Reply-To: <87frmnkkyz.fsf@HIDDEN> (Collin J. Doering's message of "Mon, 16 Dec 2024 23:11:00 -0500") References: <87y1i3byz6.fsf@HIDDEN> <87frmnkkyz.fsf@HIDDEN> Date: Wed, 18 Dec 2024 11:05:55 +0900 Message-ID: <87o719rbi4.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2607:f8b0:4864:20::735; envelope-from=maxim.cournoyer@HIDDEN; helo=mail-qk1-x735.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: -1.3 (-) X-Debbugs-Envelope-To: submit Cc: 65446 <at> debbugs.gnu.org, "Collin J. Doering" <collin@HIDDEN> X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -2.3 (--) Hello, "Collin J. Doering" via Bug reports for GNU Guix <bug-guix@HIDDEN> writes: > Perhaps worth noting that I've seen this numerous times on cuirass.genenetwork.org. > > Usually restarting guix-daemon will allow 'guix gc' to complete > without error. I see dmesg errors that match what Ludo provided. Thanks for tipping in; it's a useful thing to know the bug is reproducible in other environments. -- Thanks, Maxim
bug-guix@HIDDEN:bug#65446; Package guix.
Full text available.Received: (at 65446) by debbugs.gnu.org; 17 Dec 2024 04:11:52 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Mon Dec 16 23:11:52 2024 Received: from localhost ([127.0.0.1]:57091 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tNOw1-0006NX-3X for submit <at> debbugs.gnu.org; Mon, 16 Dec 2024 23:11:52 -0500 Received: from out-177.mta0.migadu.com ([91.218.175.177]:35568) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <collin@HIDDEN>) id 1tNOvu-0006ND-J0 for 65446 <at> debbugs.gnu.org; Mon, 16 Dec 2024 23:11:47 -0500 X-Report-Abuse: Please report any abuse attempt to abuse@HIDDEN and include these headers. DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=rekahsoft.ca; s=key1; t=1734408665; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type; bh=n1S2Hh5Gv8sG/ceJ0Q91dhzWrWWaUmOKAi6zWV84Eso=; b=igq9iMZVSSaikLwy3fAaUqL1UTPLjsJqQObG3p62AxCDkiUhcHhiBuddCaTaj4kBK6gH62 hvR2QNOCUQ/Wj28rJ2p8IetFaxNhCDCiz22HrkryxYEQ/odp+whF5LyL6afQGacDHKCQf5 8hTI5+IL27pA9Cp0x5hv4a/iwJcLaLE= From: "Collin J. Doering" <collin@HIDDEN> To: 65446 <at> debbugs.gnu.org Subject: [berlin] guix gc throws: "error: build daemon out of memory" Date: Mon, 16 Dec 2024 23:11:00 -0500 Message-ID: <87frmnkkyz.fsf@HIDDEN> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Migadu-Flow: FLOW_OUT X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 65446 X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) --=-=-= Content-Type: text/plain Content-Transfer-Encoding: quoted-printable Perhaps worth noting that I've seen this numerous times on cuirass.genenetw= ork.org. Usually restarting guix-daemon will allow 'guix gc' to complete without err= or. I see dmesg errors that match what Ludo provided. Kind regards =2D-=20 Collin J. Doering http://rekahsoft.ca http://blog.rekahsoft.ca http://git.rekahsoft.ca --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iIoEARYKADIWIQSg4F3ACfM0j/GRGeP3fjGTl82nFgUCZ2D51BQcY29sbGluQHJl a2Foc29mdC5jYQAKCRD3fjGTl82nFl2CAP91X5LwUGzxpdiysfRQXKKkQvpKUX+v +N3o20omkpwUUgD+OCV1/PGU1xhR7UJZlyDTV+cD9DWBpr5VaR+F/6W8Zw8= =25oQ -----END PGP SIGNATURE----- --=-=-=--
bug-guix@HIDDEN:bug#65446; Package guix.
Full text available.Received: (at 65446) by debbugs.gnu.org; 2 Sep 2023 20:34:07 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Sat Sep 02 16:34:07 2023 Received: from localhost ([127.0.0.1]:38739 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1qcXJm-0007Cg-Oc for submit <at> debbugs.gnu.org; Sat, 02 Sep 2023 16:34:07 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:48644) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <ludo@HIDDEN>) id 1qcXJj-0007CB-Cd for 65446 <at> debbugs.gnu.org; Sat, 02 Sep 2023 16:34:05 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <ludo@HIDDEN>) id 1qcXJT-00037B-TZ; Sat, 02 Sep 2023 16:33:47 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:In-Reply-To:Date:References:Subject:To: From; bh=qZ8cLC1ya8z65Y8D62/UQJiuIB5jiCppgb0jIOftkLE=; b=edcSM2Zlpn6ZbjYZHgSP K2hfqJq4X1XjuIHGjse0vSccOrKsdGWqSZLXJ+Q+q0DaYi2peeETLcmrJDxr5UEhiefETpbRWXeOW ZeCNnOs8AU52ys/yl9rsEizG2MJ29j7700Yjzi5GQs66TNZ1F3wUYduPI1shwoPiAYRx0AzRhKOph u18Dkw6HqG7PRqRqpt4gUO3iZ5et+QKMAKzpR9HKZgQKnNQo+ALXYeY9rWg5a/0jEshg6vm29JUb8 0kviuhQtKnHKmedkd78E7Cw+MrAbV2iLFu6IuX8Mmy2forOsMz2w07lYQyzx6ulm+5Zcchg7hTZpD RDwaz3rl5G/JQQ==; From: =?utf-8?Q?Ludovic_Court=C3=A8s?= <ludo@HIDDEN> To: Maxim Cournoyer <maxim.cournoyer@HIDDEN> Subject: Re: bug#65446: [berlin] guix gc throws: "error: build daemon out of memory" References: <87y1i3byz6.fsf@HIDDEN> Date: Sat, 02 Sep 2023 22:33:44 +0200 In-Reply-To: <87y1i3byz6.fsf@HIDDEN> (Maxim Cournoyer's message of "Mon, 21 Aug 2023 22:19:25 -0400") Message-ID: <87jzt8e2mv.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) Emacs/28.2 (gnu/linux) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 65446 Cc: 65446 <at> debbugs.gnu.org, Leo Famulari <leo@HIDDEN> X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -3.3 (---) Hi! Maxim Cournoyer <maxim.cournoyer@HIDDEN> skribis: > Since a few days on Berlin, the following appears in /var/log/mcron.log: > > 2023-08-22 04:00:29 28215 /gnu/store/4lmpqf8dnk86avq5xa2l6bznxnmrz27x-gui= x-1.4.0-7.44bbfc2/bin/guix gc: guix gc: error: build daemon out of memory > > > It's not just a fluke, according to the kernel's dmesg: > > [7190243.475312] __vm_enough_memory: pid: 28300, comm: guix-daemon, not e= nough memory for the allocation > > > Once it appears, it can be triggered simply by running 'guix gc'. The > problem can be worked around by restarting the Guix daemon, with: > > herd restart guix-daemon > > Any ideas what could cause such a condition? No idea! I ran =E2=80=9Cguix gc -C0=E2=80=9D minutes ago, which reproduced the probl= em; /var/log/guix-daemon.log reads this: --8<---------------cut here---------------start------------->8--- 2023-09-02 21:40:31 accepted connection from pid 12853, user ludo 2023-09-02 21:40:50 unexpected build daemon error: std::bad_alloc --8<---------------cut here---------------end--------------->8--- and the kernel writes what you wrote above: --8<---------------cut here---------------start------------->8--- Sep 2 21:40:50 localhost vmunix: [8204269.198144] __vm_enough_memory: pid:= 12873, comm: guix-daemon, not enough memory for the allocation Sep 2 21:40:50 localhost vmunix: [8204269.207396] __vm_enough_memory: pid:= 12873, comm: guix-daemon, not enough memory for the allocation Sep 2 21:40:50 localhost vmunix: [8204269.216639] __vm_enough_memory: pid:= 12873, comm: guix-daemon, not enough memory for the allocation --8<---------------cut here---------------end--------------->8--- My reading of the Linux code is =E2=80=98__vm_enough_memory=E2=80=99 is use= d by Linux Security Modules (LSM), so perhaps something changed in our kernel config, be it compile-time or run-time? (Cc: Leo just in case.) This is with Linux-libre 6.3.4-gnu. Ludo=E2=80=99.
bug-guix@HIDDEN:bug#65446; Package guix.
Full text available.Ludovic Courtès <ludo@HIDDEN>
to control <at> debbugs.gnu.org.
Full text available.Maxim Cournoyer <maxim.cournoyer@HIDDEN>
to control <at> debbugs.gnu.org.
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[72.10.148.105]) by smtp.gmail.com with ESMTPSA id g13-20020ae9e10d000000b0076827ce13f6sm2919433qkm.10.2023.08.21.19.19.26 for <bug-guix@HIDDEN> (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Mon, 21 Aug 2023 19:19:27 -0700 (PDT) From: Maxim Cournoyer <maxim.cournoyer@HIDDEN> To: bug-guix <bug-guix@HIDDEN> Subject: [cuirass] guix gc throws: "error: build daemon out of memory" Date: Mon, 21 Aug 2023 22:19:25 -0400 Message-ID: <87y1i3byz6.fsf@HIDDEN> MIME-Version: 1.0 Content-Type: text/plain Received-SPF: pass client-ip=2607:f8b0:4864:20::72a; envelope-from=maxim.cournoyer@HIDDEN; helo=mail-qk1-x72a.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 1.0 (+) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -0.0 (/) Hi, Since a few days on Berlin, the following appears in /var/log/mcron.log: --8<---------------cut here---------------start------------->8--- 2023-08-22 04:00:29 28215 /gnu/store/4lmpqf8dnk86avq5xa2l6bznxnmrz27x-guix-1.4.0-7.44bbfc2/bin/guix gc: guix gc: error: build daemon out of memory --8<---------------cut here---------------end--------------->8--- It's not just a fluke, according to the kernel's dmesg: --8<---------------cut here---------------start------------->8--- [7190243.475312] __vm_enough_memory: pid: 28300, comm: guix-daemon, not enough memory for the allocation --8<---------------cut here---------------end--------------->8--- Once it appears, it can be triggered simply by running 'guix gc'. The problem can be worked around by restarting the Guix daemon, with: --8<---------------cut here---------------start------------->8--- herd restart guix-daemon --8<---------------cut here---------------end--------------->8--- Any ideas what could cause such a condition? The machine hasn't been rebooted in 83 days, perhaps we should start with that. -- Thanks, Maxim
Maxim Cournoyer <maxim.cournoyer@HIDDEN>:bug-guix@HIDDEN.
Full text available.bug-guix@HIDDEN:bug#65446; Package guix.
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