GNU bug report logs - #66030
[PATCH 0/2] Fix: Julia is very slow

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: guix-patches <at> gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH 0/2] Fix: Julia is very slow
Date: Sat, 16 Sep 2023 12:52:58 +0200

Hi,

This series is for triggering the rebuild of the Julia world.  Some Julia
packages are long to build so let minimize the annoyance and make some
substitutes available before pushing to master. :-)

        bug Julia is very slow
        Cayetano Santos via Bug reports for GNU Guix <bug-guix <at> gnu.org>
        Fri, 09 Jun 2023 23:42:00 +0200
        id:87legsl3cm.fsf <at> inventati.org
        https://yhetil.org/guix/87legsl3cm.fsf <at> inventati.org
        https://issues.guix.gnu.org/msgid/87legsl3cm.fsf <at> inventati.org


Cheers,
simon

Efraim Flashner (2):
  gnu: openblas-ilp64: Add symbol suffix.
  gnu: julia: Conditionally use openblas with ILP64 support.

 gnu/packages/julia.scm | 22 ++++++++++++++--------
 gnu/packages/maths.scm |  4 +++-
 2 files changed, 17 insertions(+), 9 deletions(-)


base-commit: eeec8371890fc95c60112da299dde78b21c948c2
-- 
2.38.1

Message #8 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>
Subject: [PATCH 1/2] gnu: openblas-ilp64: Add symbol suffix.
Date: Sat, 16 Sep 2023 12:55:02 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

* gnu/packages/maths.scm (openblas-ilp64)[arguments]<#:make-flags>: Add the
symbol '64_' as suffix.
---
 gnu/packages/maths.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 6141c0988612..c051e60d5e40 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -4638,7 +4638,9 @@ (define-public openblas-ilp64
     (arguments
      (substitute-keyword-arguments (package-arguments openblas)
        ((#:make-flags flags #~'())
-        #~(append (list "INTERFACE64=1" "LIBNAMESUFFIX=ilp64")
+        #~(append (list "INTERFACE64=1"
+                        "SYMBOLSUFFIX=64_"
+                        "LIBPREFIX=libopenblas64_")
                  #$flags))))
     (synopsis "Optimized BLAS library based on GotoBLAS (ILP64 version)")
     (license license:bsd-3)))
-- 
2.38.1

Message #11 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>,
 Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH 2/2] gnu: julia: Conditionally use openblas with ILP64 support.
Date: Sat, 16 Sep 2023 12:55:03 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

Fixes <https://bugs.gnu.org/63986>.
Reported by Cayetano Santos <csantosb <at> inventati.org>.

* gnu/packages/julia.scm (julia)[arguments]<#:phases>: Conditionally use
OpenBLAS with ILP64 support for x86-64 target.
<#:make-flags>: Likewise.
[inputs]: Conditionally replace openblas by openblas-ilp64 for x86-64 target.

Co-authored-by: Simon Tournier <zimon.toutoune <at> gmail.com>
---
 gnu/packages/julia.scm | 22 ++++++++++++++--------
 1 file changed, 14 insertions(+), 8 deletions(-)

diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm
index ba541758223e..8ba2b480ce55 100644
--- a/gnu/packages/julia.scm
+++ b/gnu/packages/julia.scm
@@ -269,7 +269,10 @@ (define-public julia
                (substitute* (jlpath "nghttp2")
                  (((from "libnghttp2")) (to "libnghttp2" "libnghttp2")))
                (substitute* (jlpath "OpenBLAS")
-                 (((from "libopenblas")) (to "openblas" "libopenblas")))
+                 (((from "libopenblas"))
+                  ,@(if (target-x86-64?)
+                      `((to "openblas" "libopenblas64_" "libopenblas"))
+                      `((to "openblas" "libopenblas")))))
                (substitute* (jlpath "OpenLibm")
                  (((from "libopenlibm")) (to "openlibm" "libopenlibm")))
                (substitute* (jlpath "PCRE2")
@@ -479,12 +482,13 @@ (define-public julia
          "NO_GIT=1"             ; build from release tarball.
          "USE_GPL_LIBS=1"       ; proudly
 
-         ,@(if (target-aarch64?)
-             `("USE_BLAS64=0")
-             '())
-
-         "LIBBLAS=-lopenblas"
-         "LIBBLASNAME=libopenblas"
+         ,@(if (target-x86-64?)
+             `("USE_BLAS64=1"
+               "LIBBLAS=-lopenblas64_"
+               "LIBBLASNAME=libopenblas64_")
+             `("USE_BLAS64=0"
+               "LIBBLAS=-lopenblas"
+               "LIBBLASNAME=libopenblas"))
 
          (string-append "UTF8PROC_INC="
                         (assoc-ref %build-inputs "utf8proc")
@@ -513,7 +517,9 @@ (define-public julia
        ("llvm" ,llvm-julia)
        ("mbedtls-apache" ,mbedtls-apache)
        ("mpfr" ,mpfr)
-       ("openblas" ,openblas)
+       ,@(if (target-x86-64?)
+             `(("openblas" ,openblas-ilp64))
+             `(("openblas" ,openblas)))
        ("openlibm" ,openlibm)
        ("p7zip" ,p7zip)
        ("pcre2" ,pcre2)
-- 
2.38.1

Message #14 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>
Subject: [PATCH v2 1/3] gnu: openblas-ilp64: Add symbol suffix.
Date: Sun, 17 Sep 2023 13:52:26 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

* gnu/packages/maths.scm (openblas-ilp64)[arguments]<#:make-flags>: Add the
symbol '64_' as suffix.
---
 gnu/packages/maths.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 6141c0988612..c051e60d5e40 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -4638,7 +4638,9 @@ (define-public openblas-ilp64
     (arguments
      (substitute-keyword-arguments (package-arguments openblas)
        ((#:make-flags flags #~'())
-        #~(append (list "INTERFACE64=1" "LIBNAMESUFFIX=ilp64")
+        #~(append (list "INTERFACE64=1"
+                        "SYMBOLSUFFIX=64_"
+                        "LIBPREFIX=libopenblas64_")
                  #$flags))))
     (synopsis "Optimized BLAS library based on GotoBLAS (ILP64 version)")
     (license license:bsd-3)))

base-commit: 9b78699744b0c4c8af28820cc4f0d59b9d317ead
-- 
2.38.1

Message #17 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v2 3/3] gnu: julia-arraylayouts: Fix tests.
Date: Sun, 17 Sep 2023 13:52:28 +0200

* gnu/packages/julia-xyz.scm (julia-arraylayouts)[arguments]: Remove.
---
 gnu/packages/julia-xyz.scm | 8 --------
 1 file changed, 8 deletions(-)

diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index a1e65332fa10..a3c158763cb5 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -242,14 +242,6 @@ (define-public julia-arraylayouts
         (sha256
          (base32 "1j11jid4scw9icrbr8g6myp17nabjzmf4f40cichb20lzf1agz8l"))))
     (build-system julia-build-system)
-    (arguments
-     (list
-       #:phases
-       #~(modify-phases %standard-phases
-           (add-after 'unpack 'adjust-tests
-             (lambda _
-               (substitute* "test/test_layoutarray.jl"
-                 (("@test all\\(B") "@test_broken all(B")))))))
     (propagated-inputs
      (list julia-fillarrays))
     (native-inputs
-- 
2.38.1

Message #20 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>,
 Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v2 2/3] gnu: julia: Conditionally use openblas with ILP64
 support.
Date: Sun, 17 Sep 2023 13:52:27 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

Fixes <https://bugs.gnu.org/63986>.
Reported by Cayetano Santos <csantosb <at> inventati.org>.

* gnu/packages/julia.scm (julia)[arguments]<#:phases>: Conditionally use
OpenBLAS with ILP64 support for x86-64 target.
<#:make-flags>: Likewise.
[inputs]: Conditionally replace openblas by openblas-ilp64 for x86-64 target.

Co-authored-by: Simon Tournier <zimon.toutoune <at> gmail.com>
---
 gnu/packages/julia.scm | 22 ++++++++++++++--------
 1 file changed, 14 insertions(+), 8 deletions(-)

diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm
index ba541758223e..8ba2b480ce55 100644
--- a/gnu/packages/julia.scm
+++ b/gnu/packages/julia.scm
@@ -269,7 +269,10 @@ (define-public julia
                (substitute* (jlpath "nghttp2")
                  (((from "libnghttp2")) (to "libnghttp2" "libnghttp2")))
                (substitute* (jlpath "OpenBLAS")
-                 (((from "libopenblas")) (to "openblas" "libopenblas")))
+                 (((from "libopenblas"))
+                  ,@(if (target-x86-64?)
+                      `((to "openblas" "libopenblas64_" "libopenblas"))
+                      `((to "openblas" "libopenblas")))))
                (substitute* (jlpath "OpenLibm")
                  (((from "libopenlibm")) (to "openlibm" "libopenlibm")))
                (substitute* (jlpath "PCRE2")
@@ -479,12 +482,13 @@ (define-public julia
          "NO_GIT=1"             ; build from release tarball.
          "USE_GPL_LIBS=1"       ; proudly
 
-         ,@(if (target-aarch64?)
-             `("USE_BLAS64=0")
-             '())
-
-         "LIBBLAS=-lopenblas"
-         "LIBBLASNAME=libopenblas"
+         ,@(if (target-x86-64?)
+             `("USE_BLAS64=1"
+               "LIBBLAS=-lopenblas64_"
+               "LIBBLASNAME=libopenblas64_")
+             `("USE_BLAS64=0"
+               "LIBBLAS=-lopenblas"
+               "LIBBLASNAME=libopenblas"))
 
          (string-append "UTF8PROC_INC="
                         (assoc-ref %build-inputs "utf8proc")
@@ -513,7 +517,9 @@ (define-public julia
        ("llvm" ,llvm-julia)
        ("mbedtls-apache" ,mbedtls-apache)
        ("mpfr" ,mpfr)
-       ("openblas" ,openblas)
+       ,@(if (target-x86-64?)
+             `(("openblas" ,openblas-ilp64))
+             `(("openblas" ,openblas)))
        ("openlibm" ,openlibm)
        ("p7zip" ,p7zip)
        ("pcre2" ,pcre2)
-- 
2.38.1

Message #23 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>,
 Cayetano Santos <csantosb <at> inventati.org>
Subject: Re: bug#66030: [PATCH 0/2] Fix: Julia is very slow
Date: Sun, 17 Sep 2023 13:49:35 +0200

Hi,

On Sat, 16 Sep 2023 at 12:52, Simon Tournier <zimon.toutoune <at> gmail.com> wrote:

> This series is for triggering the rebuild of the Julia world.  Some Julia
> packages are long to build so let minimize the annoyance and make some
> substitutes available before pushing to master. :-)

Now, QA is done.

     https://qa.guix.gnu.org/issue/66030

The change introduces a regression for the package julia-arraylayouts;
it is then fixed, see v2.

The regression about the package julia-genericlinearalgebra reads:

--8<---------------cut here---------------start------------->8---
Singular value decomposition |   57     57  1.7s
Hermitian: Error During Test at /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/rectfullpacked.jl:12
  Got exception outside of a @test
  could not load symbol "dsfrk_64_":
  /gnu/store/h5mgc7ar7a05f9rwrd1makhzays5wd3s-julia-1.8.3/bin/../lib/julia/liblapack.so: undefined symbol: dsfrk_64_
  Stacktrace:
    [1] sfrk!(transr::Char, uplo::Char, trans::Char, alpha::Float64, A::Matrix{Float64}, beta::Float64, C::Vector{Float64})
      @ GenericLinearAlgebra.LAPACK2 /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/src/lapack.jl:523
    [2] Ac_mul_A_RFP(A::Matrix{Float64}, uplo::Symbol)
      @ GenericLinearAlgebra /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/src/rectfullpacked.jl:77
    [3] macro expansion
      @ /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/rectfullpacked.jl:13 [inlined]
    [4] macro expansion
      @ /gnu/store/h5mgc7ar7a05f9rwrd1makhzays5wd3s-julia-1.8.3/share/julia/stdlib/v1.8/Test/src/Test.jl:1360 [inlined]
    [5] macro expansion
      @ /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/rectfullpacked.jl:13 [inlined]
    [6] macro expansion
      @ /gnu/store/h5mgc7ar7a05f9rwrd1makhzays5wd3s-julia-1.8.3/share/julia/stdlib/v1.8/Test/src/Test.jl:1436 [inlined]
    [7] macro expansion
      @ /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/rectfullpacked.jl:7 [inlined]
    [8] macro expansion
      @ /gnu/store/h5mgc7ar7a05f9rwrd1makhzays5wd3s-julia-1.8.3/share/julia/stdlib/v1.8/Test/src/Test.jl:1360 [inlined]
    [9] top-level scope
      @ /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/rectfullpacked.jl:7
   [10] include(fname::String)
      @ Base.MainInclude ./client.jl:476
   [11] top-level scope
      @ /gnu/store/zkx6p7kz3m5k5w5iy0l1d09b2n8b0ib3-julia-genericlinearalgebra-0.2.5/share/julia/loadpath/GenericLinearAlgebra/test/runtests.jl:10
   [12] include(mod::Module, _path::String)
      @ Base ./Base.jl:419
   [13] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:303
   [14] _start()
      @ Base ./client.jl:522
--8<---------------cut here---------------end--------------->8---

Any idea?

Cheers,
simon

Message #26 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>
Subject: [PATCH v3 1/6] gnu: openblas-ilp64: Add symbol suffix.
Date: Sun, 17 Sep 2023 21:12:35 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

* gnu/packages/maths.scm (openblas-ilp64)[arguments]<#:make-flags>: Add the
symbol '64_' as suffix.
---
 gnu/packages/maths.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 6141c0988612..c051e60d5e40 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -4638,7 +4638,9 @@ (define-public openblas-ilp64
     (arguments
      (substitute-keyword-arguments (package-arguments openblas)
        ((#:make-flags flags #~'())
-        #~(append (list "INTERFACE64=1" "LIBNAMESUFFIX=ilp64")
+        #~(append (list "INTERFACE64=1"
+                        "SYMBOLSUFFIX=64_"
+                        "LIBPREFIX=libopenblas64_")
                  #$flags))))
     (synopsis "Optimized BLAS library based on GotoBLAS (ILP64 version)")
     (license license:bsd-3)))

base-commit: fc3a53525ab3dcaf7c22eec8d62294017f9760fe
-- 
2.38.1

Message #29 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Efraim Flashner <efraim <at> flashner.co.il>,
 Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v3 2/6] gnu: julia: Conditionally use openblas with ILP64
 support.
Date: Sun, 17 Sep 2023 21:12:36 +0200

From: Efraim Flashner <efraim <at> flashner.co.il>

Fixes <https://bugs.gnu.org/63986>.
Reported by Cayetano Santos <csantosb <at> inventati.org>.

* gnu/packages/julia.scm (julia)[arguments]<#:phases>: Conditionally use
OpenBLAS with ILP64 support for x86-64 target.
<#:make-flags>: Likewise.
[inputs]: Conditionally replace openblas by openblas-ilp64 for x86-64 target.

Co-authored-by: Simon Tournier <zimon.toutoune <at> gmail.com>
---
 gnu/packages/julia.scm | 22 ++++++++++++++--------
 1 file changed, 14 insertions(+), 8 deletions(-)

diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm
index ba541758223e..8ba2b480ce55 100644
--- a/gnu/packages/julia.scm
+++ b/gnu/packages/julia.scm
@@ -269,7 +269,10 @@ (define-public julia
                (substitute* (jlpath "nghttp2")
                  (((from "libnghttp2")) (to "libnghttp2" "libnghttp2")))
                (substitute* (jlpath "OpenBLAS")
-                 (((from "libopenblas")) (to "openblas" "libopenblas")))
+                 (((from "libopenblas"))
+                  ,@(if (target-x86-64?)
+                      `((to "openblas" "libopenblas64_" "libopenblas"))
+                      `((to "openblas" "libopenblas")))))
                (substitute* (jlpath "OpenLibm")
                  (((from "libopenlibm")) (to "openlibm" "libopenlibm")))
                (substitute* (jlpath "PCRE2")
@@ -479,12 +482,13 @@ (define-public julia
          "NO_GIT=1"             ; build from release tarball.
          "USE_GPL_LIBS=1"       ; proudly
 
-         ,@(if (target-aarch64?)
-             `("USE_BLAS64=0")
-             '())
-
-         "LIBBLAS=-lopenblas"
-         "LIBBLASNAME=libopenblas"
+         ,@(if (target-x86-64?)
+             `("USE_BLAS64=1"
+               "LIBBLAS=-lopenblas64_"
+               "LIBBLASNAME=libopenblas64_")
+             `("USE_BLAS64=0"
+               "LIBBLAS=-lopenblas"
+               "LIBBLASNAME=libopenblas"))
 
          (string-append "UTF8PROC_INC="
                         (assoc-ref %build-inputs "utf8proc")
@@ -513,7 +517,9 @@ (define-public julia
        ("llvm" ,llvm-julia)
        ("mbedtls-apache" ,mbedtls-apache)
        ("mpfr" ,mpfr)
-       ("openblas" ,openblas)
+       ,@(if (target-x86-64?)
+             `(("openblas" ,openblas-ilp64))
+             `(("openblas" ,openblas)))
        ("openlibm" ,openlibm)
        ("p7zip" ,p7zip)
        ("pcre2" ,pcre2)
-- 
2.38.1

Message #32 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v3 3/6] gnu: julia-arraylayouts: Fix tests.
Date: Sun, 17 Sep 2023 21:12:37 +0200

* gnu/packages/julia-xyz.scm (julia-arraylayouts)[arguments]: Remove.
---
 gnu/packages/julia-xyz.scm | 8 --------
 1 file changed, 8 deletions(-)

diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index a1e65332fa10..a3c158763cb5 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -242,14 +242,6 @@ (define-public julia-arraylayouts
         (sha256
          (base32 "1j11jid4scw9icrbr8g6myp17nabjzmf4f40cichb20lzf1agz8l"))))
     (build-system julia-build-system)
-    (arguments
-     (list
-       #:phases
-       #~(modify-phases %standard-phases
-           (add-after 'unpack 'adjust-tests
-             (lambda _
-               (substitute* "test/test_layoutarray.jl"
-                 (("@test all\\(B") "@test_broken all(B")))))))
     (propagated-inputs
      (list julia-fillarrays))
     (native-inputs
-- 
2.38.1

Message #35 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v3 4/6] gnu: julia-scanbyte: Update to 0.4.0.
Date: Sun, 17 Sep 2023 21:12:38 +0200

* gnu/packages/julia-xyz.scm (julia-scanbyte): Update to 0.4.0.
---
 gnu/packages/julia-xyz.scm | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index a3c158763cb5..8eedea85184f 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -5527,7 +5527,7 @@ (define-public julia-sass
 (define-public julia-scanbyte
   (package
     (name "julia-scanbyte")
-    (version "0.3.2")
+    (version "0.4.0")
     (source
       (origin
         (method git-fetch)
@@ -5536,7 +5536,7 @@ (define-public julia-scanbyte
                (commit (string-append "v" version))))
         (file-name (git-file-name name version))
         (sha256
-         (base32 "1c18hkcb0h6l437v2s02kijjkyly91mqark84czvh8yzxm19hr7k"))))
+         (base32 "1ww7bbh02s4l917dwkzg9pq71xk0db2rba247vz1xfm24msi8lwj"))))
     (build-system julia-build-system)
     (propagated-inputs
      (list julia-simd))
-- 
2.38.1

Message #38 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v3 5/6] gnu: Add wcslib-7.12.
Date: Sun, 17 Sep 2023 21:12:39 +0200

* gnu/packages/astronomy.scm (wcslib-7.12): New variable.
---
 gnu/packages/astronomy.scm | 16 ++++++++++++++++
 1 file changed, 16 insertions(+)

diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index e8499bb4b4df..402c09a6db4b 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -11,6 +11,7 @@
 ;;; Copyright © 2021 Foo Chuan Wei <chuanwei.foo <at> hotmail.com>
 ;;; Copyright © 2023 Iliya Tikhonenko <tikhonenko <at> mpe.mpg.de>
 ;;; Copyright © 2023 Andreas Enge <andreas <at> enge.fr>
+;;; Copyright © 2023 Simon Tournier <zimon.toutoune <at> gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -741,6 +742,21 @@ (define-public wcslib
 header.")
     (license license:lgpl3+)))
 
+;;; The version is required for julia-wcs-jll and julia-wcs.  They do not
+;;; support version higher than 7.x.
+(define-public wcslib-7.12
+  (package
+    (inherit wcslib)
+    (version "7.12")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "https://www.atnf.csiro.au/people/mcalabre/WCS/"
+                           "wcslib-" version ".tar.bz2"))
+       (sha256
+        (base32 "1m3bx6gh5w3c7vvsqcki0x20mg8lilg13m0i8nh7za89w58dxy4w"))))
+    (properties '((hidden? . #t)))))
+
 (define-public weightwatcher
   (package
     (name "weightwatcher")
-- 
2.38.1

Message #41 received at 66030 <at> debbugs.gnu.org (full text, mbox):

From: Simon Tournier <zimon.toutoune <at> gmail.com>
To: 66030 <at> debbugs.gnu.org
Cc: Simon Tournier <zimon.toutoune <at> gmail.com>
Subject: [PATCH v3 6/6] gnu: julia-wcslib-jll: Downgrade wcslib version.
Date: Sun, 17 Sep 2023 21:12:40 +0200

The package julia-wcs does not support version higher than 7.x.

* gnu/packages/julia-jll.scm (julia-wcslib-jll)[inputs]: Replace wcslib by
wcslib-7.12.
---
 gnu/packages/julia-jll.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/julia-jll.scm b/gnu/packages/julia-jll.scm
index 753651cb9e31..1c03b7e58958 100644
--- a/gnu/packages/julia-jll.scm
+++ b/gnu/packages/julia-jll.scm
@@ -1792,7 +1792,7 @@ (define-public julia-wcs-jll
               ;; There's a Julia file for each platform, override them all
               (find-files "src/wrappers/" "\\.jl$")))))))
     (inputs
-     (list wcslib))
+     (list wcslib-7.12))
     (propagated-inputs
      (list julia-jllwrappers))
     (home-page "https://github.com/JuliaBinaryWrappers/WCS_jll.jl")
-- 
2.38.1

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