GNU bug report logs - #67482
Found a bug (?) when doing `guix pull'

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Package: guix; Reported by: Zelphir Kaltstahl <zelphirkaltstahl@HIDDEN>; Done: Simon Tournier <zimon.toutoune@HIDDEN>; Maintainer for guix is bug-guix@HIDDEN.

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From: Simon Tournier <zimon.toutoune@HIDDEN>
To: Zelphir Kaltstahl <zelphirkaltstahl@HIDDEN>
Subject: Re: bug#67482: Found a bug (?) when doing `guix pull'
In-Reply-To: <fc03b7cf-d06a-4d09-83bd-5b44f2304924@HIDDEN> (Zelphir
 Kaltstahl's message of "Mon, 27 Nov 2023 10:15:13 +0000")
References: <fc03b7cf-d06a-4d09-83bd-5b44f2304924@HIDDEN>
Date: Mon, 16 Jun 2025 10:37:02 +0200
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Hi,

On Mon, 27 Nov 2023 at 10:15, Zelphir Kaltstahl <zelphirkaltstahl@HIDDEN=
> wrote:

> ./guix/serialization.scm:79:6: In procedure get-bytevector-n*:
> ERROR:
>   1. &nar-error:
>       file: #f
>       port: #<input-output: file 10>
> guix pull: error: You found a bug: the program '/gnu/store/h1273klij8l3bk=
lpajpapv18sy2y4kw8-compute-guix-derivation'
> failed to compute the derivation for Guix (version: "3778f778c37110460dd7=
8088200cbd05eb0c49e4"; system: "x86_64-linux";
> host version: "3f83dc5587573f173b1f61864c9b510f05de84b1"; pull-version: 1=
).
> Please report the COMPLETE output above by email to <bug-guix@HIDDEN>.

Thanks for the report and sorry for the long delay.

It appears to be a transient and well-known bug [1].  Therefore, I=E2=80=99m
closing:

    https://issues.guix.gnu.org/issue/67482

Feel free to reopen if I=E2=80=99m missing something.

Cheers,
simon



1: toward a plan? (was Re: Reducing "You found a bug" reports)
Simon Tournier <zimon.toutoune@HIDDEN>
Tue, 10 Sep 2024 16:51:09 +0200
id:87wmjjd0ki.fsf@HIDDEN
https://lists.gnu.org/archive/html/guix-devel/2024-09
https://yhetil.org/guix/87wmjjd0ki.fsf@HIDDEN




Notification sent to Zelphir Kaltstahl <zelphirkaltstahl@HIDDEN>:
bug acknowledged by developer. Full text available.
Reply sent to Simon Tournier <zimon.toutoune@HIDDEN>:
You have taken responsibility. Full text available.

Message received at submit <at> debbugs.gnu.org:


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Hello GNU Guix Team!

Guix tells me, that I found a bug and gives me the following output:

~~~~START~~~~
user@user-ThinkPad-P14s-Gen-2a:[0]:/home/user$ guix pull
Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'...
Authenticating channel 'guix', commits 9edb3f6 to 3778f77 (486 new commits)...
Building from this channel:
   guixhttps://git.savannah.gnu.org/git/guix.git     3778f77
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%guix substitute: warning: ci.guix.gnu.org: connection failed: Connection timed out
substitute:
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
building /gnu/store/6p8gq4x6fx1z35mz55bgk73injbcq0r3-config.scm.drv...
building /gnu/store/ri0r9yz2gn1zl3bcv19v18kxs8fwj2bw-git.scm.drv...
building /gnu/store/pv5xpp4j48rn5isa6fv135fy7q9sy4cy-hash.scm.drv...
building /gnu/store/k99k4dqavfbpk04bahnv9z36374mnjj1-module-import.drv...
building /gnu/store/z5rmmca3mqp4cd1aml7bsmxypmzd763q-module-import.drv...
building /gnu/store/p7kbawgcxgv3h656ghcjpdqmjdqddphz-module-import-compiled.drv...
building /gnu/store/war16841bqchkzf46ni8gcq7qrhn7k0f-module-import-compiled.drv...
building /gnu/store/j20189r8ybnza3spwc8pjmdvf2isqn32-compute-guix-derivation.drv...
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
substitute: updating substitutes from 'https://bordeaux.guix.gnu.org'... 100.0%
substitute: updating substitutes from 'https://ci.guix.gnu.org'...   0.0%
\Backtrace:
           17 (primitive-load "/gnu/store/h1273klij8l3bklpajpapv18sy2y4kw8-compute-guix-derivation")
In ice-9/eval.scm:
     155:9 16 (_ _)
     159:9 15 (_ #(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#<directory (guile-u?> ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?))
In ice-9/boot-9.scm:
     152:2 14 (with-fluid* _ _ _)
     152:2 13 (with-fluid* _ _ _)
In ./guix/store.scm:
   2168:24 12 (run-with-store #<store-connection 256.99 7f4e42eb80a0> #<procedure 7f4e1eb12500 at ./guix/self.scm:13?> ?)
    1996:8 11 (_ #<store-connection 256.99 7f4e42eb80a0>)
In ./guix/gexp.scm:
    299:22 10 (_ #<store-connection 256.99 7f4e42eb80a0>)
    1180:2  9 (_ #<store-connection 256.99 7f4e42eb80a0>)
    1046:2  8 (_ #<store-connection 256.99 7f4e42eb80a0>)
     892:4  7 (_ #<store-connection 256.99 7f4e42eb80a0>)
In ./guix/store.scm:
   2053:12  6 (_ #<store-connection 256.99 7f4e42eb80a0>)
    1401:5  5 (map/accumulate-builds #<store-connection 256.99 7f4e42eb80a0> #<procedure 7f4e1b5dd440 at ./guix/stor?> ?)
   1417:15  4 (_ #<store-connection 256.99 7f4e42eb80a0> ("/gnu/store/v69lh36gb404bpf7kfybcdpi9dbjk1vn-guix-daemon-?") ?)
   1417:15  3 (loop #f)
    711:11  2 (process-stderr #<store-connection 256.99 7f4e42eb80a0> _)
In ./guix/serialization.scm:
    101:11  1 (read-int #<input-output: file 10>)
      79:6  0 (get-bytevector-n* #<input-output: file 10> 8)

./guix/serialization.scm:79:6: In procedure get-bytevector-n*:
ERROR:
   1. &nar-error:
       file: #f
       port: #<input-output: file 10>
guix pull: error: You found a bug: the program '/gnu/store/h1273klij8l3bklpajpapv18sy2y4kw8-compute-guix-derivation'
failed to compute the derivation for Guix (version: "3778f778c37110460dd78088200cbd05eb0c49e4"; system: "x86_64-linux";
host version: "3f83dc5587573f173b1f61864c9b510f05de84b1"; pull-version: 1).
Please report the COMPLETE output above by email to<bug-guix@HIDDEN>.
~~~~~END~~~~~

Perhaps I should describe the version I am at?:

~~~~START~~~~
$ guix describe --format=channels
(list (channel
         (name 'guix)
         (url"https://git.savannah.gnu.org/git/guix.git")
         (branch "master")
         (commit
           "3f83dc5587573f173b1f61864c9b510f05de84b1")
         (introduction
           (make-channel-introduction
             "9edb3f66fd807b096b48283debdcddccfea34bad"
             (openpgp-fingerprint
               "BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA")))))
~~~~~END~~~~~

Hope it helps!

Meanwhile I guess I could try to do `guix pull --no-substitutes` or update guix 
itself running `guix pull && guix package -u` as root. But I am not sure I 
should do that, in case more information is needed to help with the bug report?

Best wishes,
Zelphir

-- 
repositories:https://notabug.org/ZelphirKaltstahl

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  <body>
    <p>Hello GNU Guix Team!</p>
    <p>Guix tells me, that I found a bug and gives me the following
      output:</p>
    <pre>~~~~START~~~~
user@user-ThinkPad-P14s-Gen-2a:[0]:/home/user$ guix pull
Updating channel 'guix' from Git repository at '<a class="moz-txt-link-freetext" href="https://git.savannah.gnu.org/git/guix.git">https://git.savannah.gnu.org/git/guix.git</a>'...
Authenticating channel 'guix', commits 9edb3f6 to 3778f77 (486 new commits)...
Building from this channel:
  guix      <a class="moz-txt-link-freetext" href="https://git.savannah.gnu.org/git/guix.git">https://git.savannah.gnu.org/git/guix.git</a>    3778f77
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%guix substitute: warning: ci.guix.gnu.org: connection failed: Connection timed out
substitute:
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
building /gnu/store/6p8gq4x6fx1z35mz55bgk73injbcq0r3-config.scm.drv...
building /gnu/store/ri0r9yz2gn1zl3bcv19v18kxs8fwj2bw-git.scm.drv...
building /gnu/store/pv5xpp4j48rn5isa6fv135fy7q9sy4cy-hash.scm.drv...
building /gnu/store/k99k4dqavfbpk04bahnv9z36374mnjj1-module-import.drv...
building /gnu/store/z5rmmca3mqp4cd1aml7bsmxypmzd763q-module-import.drv...
building /gnu/store/p7kbawgcxgv3h656ghcjpdqmjdqddphz-module-import-compiled.drv...
building /gnu/store/war16841bqchkzf46ni8gcq7qrhn7k0f-module-import-compiled.drv...
building /gnu/store/j20189r8ybnza3spwc8pjmdvf2isqn32-compute-guix-derivation.drv...
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://bordeaux.guix.gnu.org">https://bordeaux.guix.gnu.org</a>'... 100.0%
substitute: updating substitutes from '<a class="moz-txt-link-freetext" href="https://ci.guix.gnu.org">https://ci.guix.gnu.org</a>'...   0.0%
\Backtrace:
          17 (primitive-load "/gnu/store/h1273klij8l3bklpajpapv18sy2y4kw8-compute-guix-derivation")
In ice-9/eval.scm:
    155:9 16 (_ _)
    159:9 15 (_ #(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#(#&lt;directory (guile-u?&gt; ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?) ?))
In ice-9/boot-9.scm:
    152:2 14 (with-fluid* _ _ _)
    152:2 13 (with-fluid* _ _ _)
In ./guix/store.scm:
  2168:24 12 (run-with-store #&lt;store-connection 256.99 7f4e42eb80a0&gt; #&lt;procedure 7f4e1eb12500 at ./guix/self.scm:13?&gt; ?)
   1996:8 11 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
In ./guix/gexp.scm:
   299:22 10 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
   1180:2  9 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
   1046:2  8 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
    892:4  7 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
In ./guix/store.scm:
  2053:12  6 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt;)
   1401:5  5 (map/accumulate-builds #&lt;store-connection 256.99 7f4e42eb80a0&gt; #&lt;procedure 7f4e1b5dd440 at ./guix/stor?&gt; ?)
  1417:15  4 (_ #&lt;store-connection 256.99 7f4e42eb80a0&gt; ("/gnu/store/v69lh36gb404bpf7kfybcdpi9dbjk1vn-guix-daemon-?") ?)
  1417:15  3 (loop #f)
   711:11  2 (process-stderr #&lt;store-connection 256.99 7f4e42eb80a0&gt; _)
In ./guix/serialization.scm:
   101:11  1 (read-int #&lt;input-output: file 10&gt;)
     79:6  0 (get-bytevector-n* #&lt;input-output: file 10&gt; 8)

./guix/serialization.scm:79:6: In procedure get-bytevector-n*:
ERROR:
  1. &amp;nar-error:
      file: #f
      port: #&lt;input-output: file 10&gt;
guix pull: error: You found a bug: the program '/gnu/store/h1273klij8l3bklpajpapv18sy2y4kw8-compute-guix-derivation'
failed to compute the derivation for Guix (version: "3778f778c37110460dd78088200cbd05eb0c49e4"; system: "x86_64-linux";
host version: "3f83dc5587573f173b1f61864c9b510f05de84b1"; pull-version: 1).
Please report the COMPLETE output above by email to <a class="moz-txt-link-rfc2396E" href="mailto:bug-guix@HIDDEN">&lt;bug-guix@HIDDEN&gt;</a>.
~~~~~END~~~~~
</pre>
    <p>Perhaps I should describe the version I am at?:</p>
    <pre>~~~~START~~~~
$ guix describe --format=channels
(list (channel
        (name 'guix)
        (url <a class="moz-txt-link-rfc2396E" href="https://git.savannah.gnu.org/git/guix.git">"https://git.savannah.gnu.org/git/guix.git"</a>)
        (branch "master")
        (commit
          "3f83dc5587573f173b1f61864c9b510f05de84b1")
        (introduction
          (make-channel-introduction
            "9edb3f66fd807b096b48283debdcddccfea34bad"
            (openpgp-fingerprint
              "BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA")))))
~~~~~END~~~~~
</pre>
    <p>Hope it helps!</p>
    <p>Meanwhile I guess I could try to do `guix pull --no-substitutes`
      or update guix itself running `guix pull &amp;&amp; guix package
      -u` as root. But I am not sure I should do that, in case more
      information is needed to help with the bug report?<br>
    </p>
    <p>Best wishes,<br>
      Zelphir<br>
    </p>
    <pre class="moz-signature" cols="80">-- 
repositories: <a class="moz-txt-link-freetext" href="https://notabug.org/ZelphirKaltstahl">https://notabug.org/ZelphirKaltstahl</a></pre>
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--------------OdrDEx6ogEbAo75YXA63IxBC--




Acknowledgement sent to Zelphir Kaltstahl <zelphirkaltstahl@HIDDEN>:
New bug report received and forwarded. Copy sent to bug-guix@HIDDEN. Full text available.
Report forwarded to bug-guix@HIDDEN:
bug#67482; Package guix. Full text available.
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