GNU bug report logs - #67632
Build python-dm-tree.x86_64-linux on master is broken.

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Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: Maxim Cournoyer <maxim.cournoyer <at> gmail.com>
To: bug-guix <bug-guix <at> gnu.org>
Subject: Re: Build python-dm-tree.x86_64-linux on master is broken.
Date: Mon, 04 Dec 2023 17:53:59 -0500

Hello,

cuirass <at> gnu.org (Cuirass) writes:

> <p>The build <b>python-dm-tree.x86_64-linux</b> for specification <b>master</b> is
> broken. You can find the detailed information about this build <a
> href="https://ci.guix.gnu.org/build/2802866/details">here</a>.</p>
>
> https://ci.guix.gnu.org/build/2802866/details

--8<---------------cut here---------------start------------->8---
starting phase `sanity-check'
validating 'dm-tree' /gnu/store/9xzpw6casxsg7pfw8hmky3b21hwyxas4-python-dm-tree-0.1.8/lib/python3.10/site-packages
...checking requirements: OK
...trying to load module tree: ERROR:
Traceback (most recent call last):
  File "/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py", line 73, in <module>
    importlib.import_module(name)
  File "/gnu/store/0a75sq4c9sf8wrqw9gd2kg11cr013j68-python-3.10.7/lib/python3.10/importlib/__init__.py", line 126, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "<frozen importlib._bootstrap>", line 1050, in _gcd_import
  File "<frozen importlib._bootstrap>", line 1027, in _find_and_load
  File "<frozen importlib._bootstrap>", line 1006, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 688, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 883, in exec_module
  File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed
  File "/gnu/store/9xzpw6casxsg7pfw8hmky3b21hwyxas4-python-dm-tree-0.1.8/lib/python3.10/site-packages/tree/__init__.py", line 23, in <module>
    from .sequence import _is_attrs
  File "/gnu/store/9xzpw6casxsg7pfw8hmky3b21hwyxas4-python-dm-tree-0.1.8/lib/python3.10/site-packages/tree/sequence.py", line 19, in <module>
    from tree import _tree
ImportError: /gnu/store/9xzpw6casxsg7pfw8hmky3b21hwyxas4-python-dm-tree-0.1.8/lib/python3.10/site-packages/tree/_tree.so: undefined symbol: _ZN4absl12lts_2023080213hash_internal15MixingHashState5kSeedE
error: in phase 'sanity-check': uncaught exception:
%exception #<&invoke-error program: "python" arguments: ("/gnu/store/iqsjkp55pcx5bfcp2jm9yj5rlx9a0whd-sanity-check.py" "/gnu/store/9xzpw6casxsg7pfw8hmky3b21hwyxas4-python-dm-tree-0.1.8/lib/python3.10/site-packages") exit-status: 1 term-signal: #f stop-signal: #f> 
phase `sanity-check' failed after 0.2 seconds
--8<---------------cut here---------------end--------------->8---

I guess that may be related to the abseil-cpp upgrade in commit
af2735e874232d0ba46e2e943f0ba4697c42f70f.

-- 
Thanks,
Maxim

Message #8 received at 67632 <at> debbugs.gnu.org (full text, mbox):

From: Greg Hogan <code <at> greghogan.com>
To: 67632 <at> debbugs.gnu.org
Cc: Greg Hogan <code <at> greghogan.com>
Subject: [PATCH 2/2] gnu: python-dm-tree: Pin abseil-cpp version.
Date: Tue,  5 Dec 2023 19:48:03 +0000

* gnu/packages/python-xyz.scm (python-dm-tree)[inputs]: Replace
static-abseil-cpp with static-abseil-cpp-20220623.1.

Change-Id: Ia83175c266eeea5bab9dac4282e39d9f71b06052
---
 gnu/packages/python-xyz.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 9f458196fa..9b3c917e7a 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -5890,7 +5890,7 @@ (define-public python-dm-tree
     ;; We link the static abseil libraries here to avoid problems in
     ;; downstream libraries using potentially different variants of
     ;; abseil-cpp.  This is also what's done in the upstream CMake build.
-    (inputs (list pybind11 static-abseil-cpp python))
+    (inputs (list pybind11 static-abseil-cpp-20220623.1 python))
     (propagated-inputs (list python-wheel
                              python-absl-py
                              python-attrs
-- 
2.40.1

Message #11 received at 67632 <at> debbugs.gnu.org (full text, mbox):

From: Greg Hogan <code <at> greghogan.com>
To: 67632 <at> debbugs.gnu.org
Cc: Greg Hogan <code <at> greghogan.com>
Subject: [PATCH 1/2] gnu: Add static-abseil-cpp-20220623.1.
Date: Tue,  5 Dec 2023 19:48:02 +0000

* gnu/packages/cpp.scm (static-abseil-cpp-20220623.1): New variable.
(make-static-abseil-cpp): Parameterize base.

Change-Id: I9667914de031f431524bf195818e8d2f316e8553
---
 gnu/packages/cpp.scm | 20 +++++++++++---------
 1 file changed, 11 insertions(+), 9 deletions(-)

diff --git a/gnu/packages/cpp.scm b/gnu/packages/cpp.scm
index f7549cb22a..c451033287 100644
--- a/gnu/packages/cpp.scm
+++ b/gnu/packages/cpp.scm
@@ -1320,15 +1320,14 @@ (define (abseil-cpp-for-c++-standard base version)
                                    (number->string version))
                   #$flags)))))))
 
-(define (make-static-abseil-cpp version)
-  (let ((base abseil-cpp))
-    (hidden-package
-     (package/inherit base
-       (arguments
-        (substitute-keyword-arguments (package-arguments base)
-          ((#:configure-flags flags)
-           #~(cons* "-DCMAKE_POSITION_INDEPENDENT_CODE=ON"
-                    (delete "-DBUILD_SHARED_LIBS=ON" #$flags)))))))))
+(define (make-static-abseil-cpp base)
+  (hidden-package
+   (package/inherit base
+     (arguments
+      (substitute-keyword-arguments (package-arguments base)
+        ((#:configure-flags flags)
+         #~(cons* "-DCMAKE_POSITION_INDEPENDENT_CODE=ON"
+                  (delete "-DBUILD_SHARED_LIBS=ON" #$flags))))))))
 
 (define-public abseil-cpp-cxxstd17
   (abseil-cpp-for-c++-standard abseil-cpp 17))  ;XXX: the default with GCC 11?
@@ -1339,6 +1338,9 @@ (define-public abseil-cpp-cxxstd11
 (define-public static-abseil-cpp
   (make-static-abseil-cpp abseil-cpp))
 
+(define-public static-abseil-cpp-20220623.1
+  (make-static-abseil-cpp abseil-cpp-20220623.1))
+
 (define-public pegtl
   (package
     (name "pegtl")

-- 
2.40.1

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