GNU bug report logs - #71647
[PATCH] gnu: Add r-cutpointr.

Previous Next

Package: guix-patches;

Reported by: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>

Date: Wed, 19 Jun 2024 10:49:02 UTC

Severity: normal

Tags: patch

Done: Andreas Enge <andreas <at> enge.fr>

Bug is archived. No further changes may be made.

To add a comment to this bug, you must first unarchive it, by sending
a message to control AT debbugs.gnu.org, with unarchive 71647 in the body.
You can then email your comments to 71647 AT debbugs.gnu.org in the normal way.

Toggle the display of automated, internal messages from the tracker.

View this report as an mbox folder, status mbox, maintainer mbox


Report forwarded to guix-patches <at> gnu.org:
bug#71647; Package guix-patches. (Wed, 19 Jun 2024 10:49:02 GMT) Full text and rfc822 format available.

Acknowledgement sent to "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>:
New bug report received and forwarded. Copy sent to guix-patches <at> gnu.org. (Wed, 19 Jun 2024 10:49:02 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Cc: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
Subject: [PATCH] gnu: Add r-cutpointr.
Date: Wed, 19 Jun 2024 10:46:37 +0000
* gnu/packages/cran.scm (r-cutpointr): New variable.

Change-Id: I60e578fab1e251a526d90ce25dd1c3fc7ec4409d
---
 gnu/packages/cran.scm | 34 ++++++++++++++++++++++++++++++++++
 1 file changed, 34 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 85e0fa98f9..83f395a69e 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -704,6 +704,40 @@ (define-public r-curry
 etc.")
     (license license:gpl2+)))
 
+(define-public r-cutpointr
+  (package
+    (name "r-cutpointr")
+    (version "1.1.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "cutpointr" version))
+       (sha256
+        (base32 "1qxnh20hs3bh9v04ls7gwwl7lfc6bwl8c88dn8lkcdqyp3nyr01j"))))
+    (properties `((upstream-name . "cutpointr")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-dplyr
+                             r-foreach
+                             r-ggplot2
+                             r-gridextra
+                             r-purrr
+                             r-rcpp
+                             r-rlang
+                             r-tibble
+                             r-tidyr
+                             r-tidyselect))
+    (native-inputs (list r-knitr))
+    (home-page "https://github.com/thie1e/cutpointr")
+    (synopsis "Determine and evaluate optimal cutpoints in binary")
+    (description
+     "This package estimates optimal cutpoints for binary classification metrics.
+It also validates performance using bootstrapping.  Some methods for more
+robust cutpoint estimation are supported, e.g. a parametric method assuming
+normal distributions, bootstrapped cutpoints, and smoothing of the metric
+values per cutpoint using Generalized Additive Models.  Various plotting
+functions are included.")
+    (license license:gpl3)))
+
 (define-public r-datawizard
   (package
     (name "r-datawizard")

base-commit: da1f3aff2ea9a98651ebc69c8385ba136fe2e325
-- 
2.34.1





Reply sent to Andreas Enge <andreas <at> enge.fr>:
You have taken responsibility. (Sun, 30 Jun 2024 08:51:01 GMT) Full text and rfc822 format available.

Notification sent to "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>:
bug acknowledged by developer. (Sun, 30 Jun 2024 08:51:01 GMT) Full text and rfc822 format available.

Message #10 received at 71647-done <at> debbugs.gnu.org (full text, mbox):

From: Andreas Enge <andreas <at> enge.fr>
To: 71647-done <at> debbugs.gnu.org, 71649-done <at> debbugs.gnu.org,
 71650-done <at> debbugs.gnu.org
Subject: Close
Date: Sun, 30 Jun 2024 10:50:25 +0200
Thanks for the patches, I have pushed them after small changes to the
synopsis or description and adding a 2024 copyright line for you.

Andreas





bug archived. Request was from Debbugs Internal Request <help-debbugs <at> gnu.org> to internal_control <at> debbugs.gnu.org. (Sun, 28 Jul 2024 11:24:12 GMT) Full text and rfc822 format available.

This bug report was last modified 225 days ago.

Previous Next


GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997,2003 nCipher Corporation Ltd, 1994-97 Ian Jackson.