GNU bug report logs - #71649
[PATCH] gnu: Add r-fastglm.

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Package: guix-patches;

Reported by: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>

Date: Wed, 19 Jun 2024 12:23:01 UTC

Severity: normal

Tags: patch

Done: Andreas Enge <andreas <at> enge.fr>

Bug is archived. No further changes may be made.

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Report forwarded to guix-patches <at> gnu.org:
bug#71649; Package guix-patches. (Wed, 19 Jun 2024 12:23:01 GMT) Full text and rfc822 format available.

Acknowledgement sent to "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>:
New bug report received and forwarded. Copy sent to guix-patches <at> gnu.org. (Wed, 19 Jun 2024 12:23:01 GMT) Full text and rfc822 format available.

Message #5 received at submit <at> debbugs.gnu.org (full text, mbox):

From: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
To: <guix-patches <at> gnu.org>
Cc: "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>
Subject: [PATCH] gnu: Add r-fastglm.
Date: Wed, 19 Jun 2024 12:20:32 +0000
* gnu/packages/cran.scm (r-fastglm): New variable.

Change-Id: I187c9579b1f8ff47e47d721d9684c16698066148
---
 gnu/packages/cran.scm | 24 ++++++++++++++++++++++++
 1 file changed, 24 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 83f395a69e..c84e3c3687 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -5273,6 +5273,30 @@ (define-public r-fastmap
 data structures in C++.")
     (license license:expat)))
 
+(define-public r-fastglm
+  (package
+    (name "r-fastglm")
+    (version "0.0.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "fastglm" version))
+       (sha256
+        (base32 "0283kgk81cxbii7ljmp1rzqg5mzkvf7cj7lflhhhkgj5ljqina2i"))))
+    (properties `((upstream-name . "fastglm")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-bh r-bigmemory r-rcpp r-rcppeigen))
+    (native-inputs (list r-knitr))
+    (home-page "https://cran.r-project.org/package=fastglm")
+    (synopsis
+     "Fast and stable fitting of generalized linear models using 'RcppEigen'")
+    (description
+     "This package fits generalized linear models efficiently using @code{RcppEigen}'.
+The iteratively reweighted least squares implementation utilizes the
+step-halving approach of Marschner to help safeguard against convergence
+issues.")
+    (license license:gpl2+)))
+
 (define-public r-fastghquad
   (package
     (name "r-fastghquad")

base-commit: da1f3aff2ea9a98651ebc69c8385ba136fe2e325
prerequisite-patch-id: 01e990e85f2d1bd0c50ae32161d5ccf814a0ef7e
-- 
2.34.1





Reply sent to Andreas Enge <andreas <at> enge.fr>:
You have taken responsibility. (Sun, 30 Jun 2024 08:51:02 GMT) Full text and rfc822 format available.

Notification sent to "Afkhami, Navid" <Navid.Afkhami <at> mdc-berlin.de>:
bug acknowledged by developer. (Sun, 30 Jun 2024 08:51:02 GMT) Full text and rfc822 format available.

Message #10 received at 71649-done <at> debbugs.gnu.org (full text, mbox):

From: Andreas Enge <andreas <at> enge.fr>
To: 71647-done <at> debbugs.gnu.org, 71649-done <at> debbugs.gnu.org,
 71650-done <at> debbugs.gnu.org
Subject: Close
Date: Sun, 30 Jun 2024 10:50:25 +0200
Thanks for the patches, I have pushed them after small changes to the
synopsis or description and adding a 2024 copyright line for you.

Andreas





bug archived. Request was from Debbugs Internal Request <help-debbugs <at> gnu.org> to internal_control <at> debbugs.gnu.org. (Sun, 28 Jul 2024 11:24:13 GMT) Full text and rfc822 format available.

This bug report was last modified 99 days ago.

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