GNU bug report logs - #72459
[PATCH] Add r_numero

Please note: This is a static page, with minimal formatting, updated once a day.
Click here to see this page with the latest information and nicer formatting.

Package: guix-patches; Reported by: Tor-björn Claesson <tclaesson@HIDDEN>; Keywords: patch; dated Sun, 4 Aug 2024 11:38:02 UTC; Maintainer for guix-patches is guix-patches@HIDDEN.

Message received at submit <at> debbugs.gnu.org:


Received: (at submit) by debbugs.gnu.org; 4 Aug 2024 11:37:15 +0000
From debbugs-submit-bounces <at> debbugs.gnu.org Sun Aug 04 07:37:15 2024
Received: from localhost ([127.0.0.1]:55591 helo=debbugs.gnu.org)
	by debbugs.gnu.org with esmtp (Exim 4.84_2)
	(envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>)
	id 1saZY3-0008Lh-BB
	for submit <at> debbugs.gnu.org; Sun, 04 Aug 2024 07:37:15 -0400
Received: from lists.gnu.org ([209.51.188.17]:43664)
 by debbugs.gnu.org with esmtp (Exim 4.84_2)
 (envelope-from <tclaesson@HIDDEN>) id 1saZY1-0008LR-48
 for submit <at> debbugs.gnu.org; Sun, 04 Aug 2024 07:37:14 -0400
Received: from eggs.gnu.org ([2001:470:142:3::10])
 by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256)
 (Exim 4.90_1) (envelope-from <tclaesson@HIDDEN>)
 id 1saZXf-0003RH-TO
 for guix-patches@HIDDEN; Sun, 04 Aug 2024 07:36:51 -0400
Received: from mail-lf1-x133.google.com ([2a00:1450:4864:20::133])
 by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128)
 (Exim 4.90_1) (envelope-from <tclaesson@HIDDEN>)
 id 1saZXd-0003pW-PS
 for guix-patches@HIDDEN; Sun, 04 Aug 2024 07:36:51 -0400
Received: by mail-lf1-x133.google.com with SMTP id
 2adb3069b0e04-52efc60a6e6so14874939e87.1
 for <guix-patches@HIDDEN>; Sun, 04 Aug 2024 04:36:48 -0700 (PDT)
DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=gmail.com; s=20230601; t=1722771406; x=1723376206; darn=gnu.org;
 h=mime-version:message-id:date:subject:to:from:from:to:cc:subject
 :date:message-id:reply-to;
 bh=2pAST3aMm5oVje3cmiH9A3EoLkbIrMwFpWDkK80jmsM=;
 b=OmEW4qoyyfh73QfkcyE7kmaIuqRCJg/qGL8SWAdWYYelLseUE4R4PwuY/HXjWy+Fo3
 ULUJRCiGIGDVvTjpa1i+MXO88AcWX2pbMkNmMjTanm09F5A15mWW7ItO3JKxv+B+aYYw
 mKZ468P68SSQeCd0Cp3PKX1ZjkCeRAcCuc5sPZgLZOmcfnKr2NV+OYkMOrwUEQu6Zolm
 b5w37dFbuW8sf85cWAnKhzQ9ObdkExJLgNZ7SqRe6fHqfMtcbGmjJlTs69gFKLnc4AlG
 AVTrNT5T6EzpRZw1i8Dvk/chKoXiWro6Yur6VZdqgD8Js/zYtqXKKKdjMTsPXrSio9h7
 MGjg==
X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=1e100.net; s=20230601; t=1722771406; x=1723376206;
 h=mime-version:message-id:date:subject:to:from:x-gm-message-state
 :from:to:cc:subject:date:message-id:reply-to;
 bh=2pAST3aMm5oVje3cmiH9A3EoLkbIrMwFpWDkK80jmsM=;
 b=KT1ef7/vNiuFiDiennx/MXHDA8hGxCaerEOdtmM/VJEG8ZiuxtLEzTbOds8p/G+o2V
 xX6YtosSmdQOyFjC1kFBMjAaOHY4rsSa+DkmF6wM7h3QCGe/EVZnol56qkMvBIGKe9WL
 avL4rp5RY493oLDoOKfgI8jlQPpOEoSchkSMpiy9E74EfYx6y6NOkl9BK3A2ApbVwzUJ
 w/lOD3cBtG5sAOymg5NYTq/g3AzzoxFr5tLxskEx919R7SwrebkOqN9fRYfvLHySHQEp
 Lcj92n5luXEYrN8neTi7uKqOuOiONHnPvbI3aPO5OAzYl+kIuudsTXZrHZcT3Bm+C+sW
 R53Q==
X-Forwarded-Encrypted: i=1;
 AJvYcCUEBxzlKlhbXyWwAvaSQSUAF2PJhT3g+ODgTh4BXP7CnfjhGLIKf8SrezlxMtBAmL5VpihupkmfEdf3QKU=@gnu.org
X-Gm-Message-State: AOJu0Yxr6mR9OufQ1MiWkd4+lknvRYnU9J3D0N8050/6+w4JdlAlShSo
 22X/dHqlBJpenqEKIxfWrmiwvUiMQRtSzrpQNM8l5GUK7xShJYWKQ9h4UA==
X-Google-Smtp-Source: AGHT+IF6tNb2ZldvGEldUrj0Y4jwImiUSoks3HgV29jjqtIp5iYv7ZzZzS7ucbvQQ1iyzh7Q28KZxg==
X-Received: by 2002:a05:6512:1293:b0:52e:9d60:7b4c with SMTP id
 2adb3069b0e04-530bb3b6346mr4554076e87.61.1722771405500; 
 Sun, 04 Aug 2024 04:36:45 -0700 (PDT)
Received: from barbar ([193.64.204.56]) by smtp.gmail.com with ESMTPSA id
 2adb3069b0e04-530bba07585sm761020e87.5.2024.08.04.04.36.44
 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256);
 Sun, 04 Aug 2024 04:36:44 -0700 (PDT)
From: =?utf-8?Q?Tor-bj=C3=B6rn_Claesson?= <tclaesson@HIDDEN>
To: laurent.gatto@HIDDEN, rekado@HIDDEN, zimon.toutoune@HIDDEN,
 guix-patches@HIDDEN
Subject: [PATCH] Add r_numero
Date: Sun, 04 Aug 2024 14:36:22 +0300
Message-ID: <87zfpstt8p.fsf@HIDDEN>
MIME-Version: 1.0
Content-Type: multipart/mixed; boundary="=-=-="
Received-SPF: pass client-ip=2a00:1450:4864:20::133;
 envelope-from=tclaesson@HIDDEN; helo=mail-lf1-x133.google.com
X-Spam_score_int: -20
X-Spam_score: -2.1
X-Spam_bar: --
X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1,
 DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001,
 RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001,
 SPF_PASS=-0.001 autolearn=ham autolearn_force=no
X-Spam_action: no action
X-Spam-Score: -1.3 (-)
X-Debbugs-Envelope-To: submit
X-BeenThere: debbugs-submit <at> debbugs.gnu.org
X-Mailman-Version: 2.1.18
Precedence: list
List-Id: <debbugs-submit.debbugs.gnu.org>
List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe>
List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/>
List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org>
List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help>
List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, 
 <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe>
Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org
Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org>
X-Spam-Score: -2.3 (--)

--=-=-=
Content-Type: text/plain; charset=utf-8
Content-Transfer-Encoding: quoted-printable

Hello team R!

Please find attached a patch to add the Numero package from CRAN.

The resulting built package contains some javascript, but I think this is s=
pecific to
Numeros drawing of cluster maps, and not something that could be packaged
as an external dependency.
I'm happy to submit this to guix-science instead, if this is a problem.

Best regards,
Tor-bj=C3=B6rn Claesson


--=-=-=
Content-Type: text/x-patch; charset=utf-8
Content-Disposition: attachment; filename=0001-gnu-Add-r-numero.patch
Content-Transfer-Encoding: quoted-printable

From a17c17e88aed7667e7c68529fffaaaa3b27c0e5c Mon Sep 17 00:00:00 2001
From: Torb <tclaesson@HIDDEN>
Date: Sun, 4 Aug 2024 14:15:36 +0300
Subject: [PATCH] gnu: Add r-numero.

* gnu/packages/cran.scm (r-numero): New variable.

Change-Id: I35c4f5505cfd19037788b6bc1a1f24ad8a4b5cac
---
 gnu/packages/cran.scm | 24 +++++++++++++++++++++++-
 1 file changed, 23 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 32ee25e1ae..d6e251ab01 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -38,6 +38,7 @@
 ;;; Copyright =C2=A9 2022-2024 Navid Afkhami <navid.afkhami@HIDDEN>
 ;;; Copyright =C2=A9 2022 Greg Hogan <code@HIDDEN>
 ;;; Copyright =C2=A9 2024 Marco Baggio <guix@HIDDEN>
+;;; Copyright =C2=A9 2024 Tor-bj=C3=B6rn Claesson <tclaesson@HIDDEN>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -98,7 +99,7 @@ (define-module (gnu packages cran)
   #:use-module (gnu packages pdf)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages pulseaudio)  ;libsndfile
+  #:use-module (gnu packages pulseaudio) ;libsndfile
   #:use-module (gnu packages protobuf)
   #:use-module (gnu packages python)
   #:use-module (gnu packages python-xyz)
@@ -1551,6 +1552,27 @@ (define-public r-googlesheets4
 can read and write both the metadata and the cell data in a Sheet.")
     (license license:expat)))
=20
+(define-public r-numero
+  (package
+    (name "r-numero")
+    (version "1.9.7")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "Numero" version))
+       (sha256
+        (base32 "04pf6x7qmgkfyj98c23maxcvlwwwfw6jas7l72xp0713lyndjl15"))))
+    (build-system r-build-system)
+    (propagated-inputs (list r-rcpp))
+    (native-inputs (list r-knitr r-rmarkdown))
+    (home-page "https://cran.r-project.org/package=3DNumero")
+    (synopsis "Statistical framework to define subgroups in complex datase=
ts")
+    (description
+     "The package includes the necessary functions to construct
+a self-organizing map of data, to evaluate the statistical signifcance of =
the
+observed data patterns, and to visualize the results.")
+    (license license:gpl2+)))
+
 (define-public r-pma
   (package
     (name "r-pma")
--=20
2.45.2


--=-=-=--




Acknowledgement sent to Tor-björn Claesson <tclaesson@HIDDEN>:
New bug report received and forwarded. Copy sent to guix-patches@HIDDEN. Full text available.
Report forwarded to guix-patches@HIDDEN:
bug#72459; Package guix-patches. Full text available.
Please note: This is a static page, with minimal formatting, updated once a day.
Click here to see this page with the latest information and nicer formatting.
Last modified: Sun, 12 Jan 2025 05:45:02 UTC

GNU bug tracking system
Copyright (C) 1999 Darren O. Benham, 1997 nCipher Corporation Ltd, 1994-97 Ian Jackson.