GNU logs - #77086, boring messages

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Subject: bug#77086: Filesystems not unmounted on reboot
Resent-From: Ian Eure <ian@HIDDEN>
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Starting recently (last 2-3 weeks), my Guix System machines have
failed to unmount filesystems when restarted.  ex. inside an Emacs
EXWM X11 session, running `sudo reboot' in a shell causes the=20
system
to perform a lengthy fsck on next boot, saying "recovering=20
journal."

Others on IRC have noticed this as well.  Some think it=E2=80=99s=20
correlated
to running `sudo guix system reconfigure', but I observe it=20
whether
I=E2=80=99ve reconfigured or not.

I=E2=80=99m using LUKS1 whole-disk encryption.

Here=E2=80=99s the `guix system describe' output from a laptop (ThinkPad=20
X280)
which is exhibiting the problem:

   Generation 46	Mar 17 2025 07:22:11	(current)
     file name: /var/guix/profiles/system-46-link
     canonical file name:
     /gnu/store/zjk9w5jwdrlsc6kr8s4iq3317ys17shf-system
     label: GNU with Linux 6.13.7
     bootloader: grub-efi
     root device: /dev/mapper/cryptroot
     kernel:
     /gnu/store/q8vjcaaykh0p7769xk1rz29di1axry07-linux-6.13.7/bzImage
     channels:
       guix:
         repository URL:
         https://git.savannah.gnu.org/git/guix.git
         branch: master
         commit: 98be320183579b3d09cf4059e86a9781485628b4
       nonguix:
         repository URL: https://gitlab.com/nonguix/nonguix
         branch: master
         commit: fa416ebdf9e4d5c3b9676ded8829c5875bcf4f0e
       atomized:
         repository URL:
         https://codeberg.org/ieure/atomized-guix.git
         branch: main
         commit: bd4ef7fad637b7213e1a96885b61a6ca471eeb0b
     configuration file:
     /gnu/store/dx2hzsqh47iz2pbiwiqsd8w7lpc6f4jy-configuration.scm

 -- Ian

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From: help-debbugs@HIDDEN (GNU bug Tracking System)
To: Ian Eure <ian@HIDDEN>
Subject: bug#77086: Acknowledgement (Filesystems not unmounted on reboot)
Message-ID: <handler.77086.B.174224583010873.ack <at> debbugs.gnu.org>
References: <878qp39xec.fsf@HIDDEN>
X-Gnu-PR-Message: ack 77086
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Reply-To: 77086 <at> debbugs.gnu.org
Date: Mon, 17 Mar 2025 21:11:03 +0000

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--=20
77086: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D77086
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Message sent to bug-guix@HIDDEN:

Subject: bug#77086: Filesystems not unmounted on reboot
References: <878qp39xec.fsf@HIDDEN>
In-Reply-To: <878qp39xec.fsf@HIDDEN>
Resent-From: Ricardo Wurmus <rekado@HIDDEN>
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From: Ricardo Wurmus <rekado@HIDDEN>
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I have also seen this on a netbook where I have never used "guix 
system reconfigure"; I only ever use "guix deploy" from another 
machine to upgrade that system.

This is the version of Guix used:

  guix 9212459
    repository URL: https://codeberg.org/guix/guix-mirror
    branch: master
    commit: 92124591eedf27e988c84f75acd4b4d99ff43122
  rosenthal 5172fac
    repository URL: https://codeberg.org/hako/rosenthal.git
    branch: trunk
    commit: 5172fac369025bc98cbfb925b728b2cae20ac2c5

The kernel is linux-libre-lts.

-- 
Ricardo

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severity 77086 grave
thanks

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Subject: bug#77086: Filesystems not unmounted on reboot
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Cc: Ricardo Wurmus <rekado@HIDDEN>, Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN>, Felix Lechner <felix.lechner@HIDDEN>, Ian Eure <ian@HIDDEN>
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 Content preview:  Hello guys,
 so I started looking into this a bit (not promising
 any results though), and I can pretty confidently say that there is indeed
 an issue in the unmount. I have created a VM system, tried rebooting a few
 times and it was fine, however then I tried reconfiguring, and for that run
 I got an error upon reboot. Not only that, I can't boot it anymore :) the
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 Content preview:  Hello guys, so I started looking into this a bit (not promising
    any results though), and I can pretty confidently say that there is indeed
    an issue in the unmount. I have created a VM system, tried rebooting a few
    times and it was fine, however then I tried reconfiguring, and for that run
    I got an error upon reboot. Not only that, I can't boot it anymore :) the
    [...] 
 
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--=-=-=
Content-Type: text/plain


Hello guys,

so I started looking into this a bit (not promising any results though),
and I can pretty confidently say that there is indeed an issue in the
unmount.

I have created a VM system, tried rebooting a few times and it was fine,
however then I tried reconfiguring, and for that run I got an error upon
reboot. Not only that, I can't boot it anymore :) the filesystem got
corrupted in a way that prevents boots. Welp.

I can't really say at current moment what is causing this, but the
problem is that the root device is busy so it can't be unmounted.
I have a hypothesis given the log I see: that the root filesystem
is being unmounted first rather than last like it should be.
Could the reconfigure throw shepherd off? I am also CCing Ludovic,
I hope he won't mind.

I would like to also point out an e-mail in the
guix-devel sent recently that someone got a timer service running after
reconfigure, but not after reboot, where after reboot the timer module
is not imported by default unless put to service's modules, but after
reconfigure it works, so this leaves me with yet another point for the
impression that shepherd behaves differently on reboot as opposed to
reconfigure reload.

I will try digging more, but I am not that knowledgeable about
shepherd yet, so it will take longer time.

I am attaching both log (starting after reboot command)
and the configuration used for the vm.


--=-=-=
Content-Type: text/plain
Content-Disposition: attachment; filename=reboot_log
Content-Description: Reboot log

[ 2532.130331] shepherd[1]: Terminating system log service.
[ 2532.138540] shepherd[1]: Service system-log stopped.
[ 2532.145581] shepherd[1]: Service system-log is now stopped.
[ 2532.149364] shepherd[1]: Closing 4 system log ports.
[ 2532.151578] shepherd[1]: Service term-console is not running.
[ 2532.154795] shepherd[1]: Service term-tty1 is not running.
[ 2532.159702] shepherd[1]: Service term-tty2 is not running.
[ 2532.165720] shepherd[1]: Service term-tty3 is not running.
[ 2532.174412] shepherd[1]: Service term-tty4 is not running.
[ 2532.176655] shepherd[1]: Service term-tty5 is not running.
[ 2532.179148] shepherd[1]: Service term-tty6 is not running.
[ 2532.182485] shepherd[1]: Stopping service loopback...
[ 2532.194841] shepherd[1]: Registering new logger for loopback.
[ 2532.245307] shepherd[1]: Service loopback might have failed to stop.
[ 2532.247610] shepherd[1]: Service loopback is now stopped.
[ 2532.257829] shepherd[1]: Stopping service guix-daemon...
[ 2532.262768] shepherd[1]: Service guix-daemon stopped.
[ 2532.269632] shepherd[1]: Service guix-daemon is now stopped.
[ 2532.274953] shepherd[1]: Stopping service timer...
[ 2532.277806] shepherd[1]: Service timer stopped.
[ 2532.279442] shepherd[1]: Service timer is now stopped.
[ 2532.283475] shepherd[1]: Stopping service transient...
[ 2532.287844] shepherd[1]: Service transient stopped.
[ 2532.289999] shepherd[1]: Service transient is now stopped.
[ 2532.293995] shepherd[1]: Stopping service log-cleanup...
[ 2532.297223] shepherd[1]: Terminating timer 'log-cleanup' with 0 processes running.
[ 2532.300247] shepherd[1]: Service log-cleanup stopped.
[ 2532.301978] shepherd[1]: Service log-cleanup is now stopped.
[ 2532.306241] shepherd[1]: Stopping service user-processes...
[ 2532.311358] shepherd[1]: sending all processes the TERM signal
[ 2532.315239] shepherd[1]: Service udev has been disabled.
[ 2536.356551] shepherd[1]: all processes have been terminated
[ 2536.365466] shepherd[1]: Service user-processes stopped.
[ 2536.374333] shepherd[1]: Service user-processes is now stopped.
[ 2536.378815] shepherd[1]: Stopping service urandom-seed...
[ 2536.386166] shepherd[1]: Service urandom-seed might have failed to stop.
[ 2536.389012] shepherd[1]: Service urandom-seed is now stopped.
[ 2536.391950] shepherd[1]: Service guix-daemon is not running.
[ 2536.399246] shepherd[1]: Service nscd is not running.
[ 2536.402536] shepherd[1]: Stopping service log-rotation...
[ 2536.408077] shepherd[1]: Terminating timer 'log-rotation' with 0 processes running.
[ 2536.412356] shepherd[1]: Service log-rotation stopped.
[ 2536.415228] shepherd[1]: Service log-rotation is now stopped.
[ 2536.418957] shepherd[1]: Service timer is not running.
[ 2536.426109] shepherd[1]: Service transient is not running.
[ 2536.429836] shepherd[1]: Service log-cleanup is not running.
[ 2536.436242] shepherd[1]: Service udev is not running.
[ 2536.439446] shepherd[1]: Service pam is not running.
[ 2536.444939] shepherd[1]: Service user-processes is not running.
[ 2536.449993] shepherd[1]: Stopping service file-systems...
[ 2536.454141] shepherd[1]: Service file-systems stopped.
[ 2536.457264] shepherd[1]: Service file-systems is now stopped.
[ 2536.462044] shepherd[1]: Stopping service file-system-/var/lib/gdm...
[ 2536.469161] shepherd[1]: Service file-system-/var/lib/gdm stopped.
[ 2536.477353] shepherd[1]: Service file-system-/var/lib/gdm is now stopped.
[ 2536.482038] shepherd[1]: Stopping service file-system-/var/cache/fontconfig...
[ 2536.489787] shepherd[1]: Service file-system-/var/cache/fontconfig stopped.
[ 2536.493564] shepherd[1]: Service file-system-/var/cache/fontconfig is now stopped.
[ 2536.502552] shepherd[1]: Stopping service file-system-/sys/fs/cgroup/elogind...
[ 2536.506804] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind stopped.
[ 2536.512288] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind is now stopped.
[ 2536.525624] shepherd[1]: Stopping service file-system-/sys/fs/cgroup...
[ 2536.529952] shepherd[1]: Service file-system-/sys/fs/cgroup stopped.
[ 2536.533503] shepherd[1]: Service file-system-/sys/fs/cgroup is now stopped.
[ 2536.538327] shepherd[1]: Stopping service file-system-/run/user...
[ 2536.546013] shepherd[1]: Ignoring error while stopping root-file-system: (system-error "umount" "~S: ~A" ("/run/user" "Device or resource busy") (16))
[ 2536.553455] shepherd[1]: Service file-system-/run/user might have failed to stop.
[ 2536.557119] shepherd[1]: Service file-system-/run/user is now stopped.
[ 2536.559216] shepherd[1]: Service file-system-/var/lib/gdm is not running.
[ 2536.565337] shepherd[1]: Service file-system-/var/cache/fontconfig is not running.
[ 2536.569070] shepherd[1]: Service file-system-/sys/fs/cgroup is not running.
[ 2536.572297] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind is not running.
[ 2536.577438] shepherd[1]: Service file-system-/run/user is not running.
[ 2536.582456] shepherd[1]: Stopping service file-system-/run/systemd...
[ 2536.587808] shepherd[1]: Service file-system-/run/systemd stopped.
[ 2536.590608] shepherd[1]: Service file-system-/run/systemd is now stopped.
[ 2536.595648] shepherd[1]: Stopping service file-system-/gnu/store...
[ 2536.598653] shepherd[1]: Service file-system-/gnu/store stopped.
[ 2536.600495] shepherd[1]: Service file-system-/gnu/store is now stopped.
[ 2536.606699] shepherd[1]: Stopping service file-system-/sys/firmware/efi/efivars...
[ 2536.610370] shepherd[1]: Service file-system-/sys/firmware/efi/efivars stopped.
[ 2536.613303] shepherd[1]: Service file-system-/sys/firmware/efi/efivars is now stopped.
[ 2536.618469] shepherd[1]: Stopping service file-system-/dev/shm...
[ 2536.622009] shepherd[1]: Service file-system-/dev/shm stopped.
[ 2536.629474] shepherd[1]: Service file-system-/dev/shm is now stopped.
[ 2536.639038] shepherd[1]: Stopping service file-system-/sys/kernel/debug...
[ 2536.643328] shepherd[1]: Service file-system-/sys/kernel/debug stopped.
[ 2536.648765] shepherd[1]: Service file-system-/sys/kernel/debug is now stopped.
[ 2536.656363] shepherd[1]: Stopping service file-system-/dev/pts...
[ 2536.661035] shepherd[1]: Service file-system-/dev/pts stopped.
[ 2536.665900] shepherd[1]: Service file-system-/dev/pts is now stopped.
[ 2536.671988] shepherd[1]: Stopping service user-file-systems...
[ 2536.679312] shepherd[1]: unmounting '/run/user/0'...
[ 2536.682633] shepherd[1]: Service user-file-systems stopped.
[ 2536.689969] shepherd[1]: Service user-file-systems is now stopped.
[ 2536.695255] shepherd[1]: Service file-systems is not running.
[ 2536.702030] shepherd[1]: Service host-name is not running.
[ 2536.708718] ACPI: PM: Preparing to enter system sleep state S5
[ 2536.711132] reboot: Restarting system
[ 2536.712438] reboot: machine restart
--=-=-=
Content-Type: text/plain
Content-Disposition: attachment; filename=simple.scm
Content-Description: configuration.scm

;; -*- mode: scheme; -*-
;; This is an operating system configuration for a VM image.
;; Modify it as you see fit and instantiate the changes by running:
;;
;;   guix system reconfigure /etc/config.scm
;;

(use-modules (gnu) (guix) (srfi srfi-1))
(use-service-modules desktop mcron networking spice ssh xorg sddm)
(use-package-modules bootloaders fonts
                     package-management xdisorg xorg)

(define vm-image-motd (plain-file "motd" "
\x1b[1;37mThis is the GNU system.  Welcome!\x1b[0m

This instance of Guix is a template for virtualized environments.
You can reconfigure the whole system by adjusting /etc/config.scm
and running:

  guix system reconfigure /etc/config.scm

Run '\x1b[1;37minfo guix\x1b[0m' to browse documentation.

\x1b[1;33mConsider setting a password for the 'root' and 'guest' \
accounts.\x1b[0m
"))

(operating-system
  (host-name "gnu")
  (timezone "Etc/UTC")
  (locale "en_US.utf8")
  (keyboard-layout (keyboard-layout "us" "altgr-intl"))

  ;; Label for the GRUB boot menu.
  (label (string-append "GNU Guix "
                        (or (getenv "GUIX_DISPLAYED_VERSION")
                            (package-version guix))))

  (firmware '())

  (kernel-arguments (list
                     "console=ttyS0"
                     "console=tty0"))

  ;; Below we assume /dev/vda is the VM's hard disk.
  ;; Adjust as needed.
  (bootloader (bootloader-configuration
               (bootloader grub-bootloader)
               (targets '("/dev/vda"))
               (terminal-outputs '(console))))
  (file-systems (cons (file-system
                        (mount-point "/")
                        (device "/dev/vda1")
                        (type "ext4"))
                      %base-file-systems))

  (users (cons (user-account
                (name "guest")
                (comment "GNU Guix Live")
                (password "")           ;no password
                (group "users")
                (supplementary-groups '("wheel" "netdev"
                                        "audio" "video")))
               %base-user-accounts))

  ;; Our /etc/sudoers file.  Since 'guest' initially has an empty password,
  ;; allow for password-less sudo.
  (sudoers-file (plain-file "sudoers" "\
root ALL=(ALL) ALL
%wheel ALL=NOPASSWD: ALL\n"))

  (packages
   (append (list font-bitstream-vera
                 ;; Auto-started script providing SPICE dynamic resizing for
                 ;; Xfce (see:
                 ;; https://gitlab.xfce.org/xfce/xfce4-settings/-/issues/142).
                 x-resize)
           %base-packages))

  (services
   (append (list

                 ;; Uncomment the line below to add an SSH server.
                 (service openssh-service-type)

                 ;; Add support for the SPICE protocol, which enables dynamic
                 ;; resizing of the guest screen resolution, clipboard
                 ;; integration with the host, etc.
                 (service spice-vdagent-service-type)

                 ;; Use the DHCP client service rather than NetworkManager.
                 (service dhcp-client-service-type))

           ;; Remove some services that don't make sense in a VM.
           (remove (lambda (service)
                     (let ((type (service-kind service)))
                       (or (memq type
                                 (list gdm-service-type
                                       sddm-service-type
                                       wpa-supplicant-service-type
                                       cups-pk-helper-service-type
                                       network-manager-service-type
                                       modem-manager-service-type))
                           (eq? 'network-manager-applet
                                (service-type-name type)))))
                   (modify-services %desktop-services
                     (login-service-type config =>
                                         (login-configuration
                                          (inherit config)
                                          (motd vm-image-motd)))

                     ;; Install and run the current Guix rather than an older
                     ;; snapshot.
                     (guix-service-type config =>
                                        (guix-configuration
                                         (inherit config)
                                         (guix (current-guix))))))))

  ;; Allow resolution of '.local' host names with mDNS.
  (name-service-switch %mdns-host-lookup-nss))

--=-=-=
Content-Type: text/plain



Regards,
Rutherther

--=-=-=--

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--=-=-=
Content-Type: text/plain


Hello guys,

I am writing with an update, because not everything I wrote in the first
e-mail was true exactly. Please let me know if updates distrub you and I
won't be CCing you again.

"Rutherther" <rutherther@HIDDEN> writes:

>
> I have created a VM system, tried rebooting a few times and it was fine,
> however then I tried reconfiguring, and for that run I got an error upon
> reboot. Not only that, I can't boot it anymore :) the filesystem got
> corrupted in a way that prevents boots. Welp.

This wasn't the case, I just haven't realized the correct partition to
boot from is /dev/vda2, not /dev/vda1, I copied the image from guix repo
and haven't realized it's wrong (I suppose it haven't used efi before,
but switched to it?). Since the images get the FS replaced by custom
partitions, this error was visible only after reconfigure. After
changing it to /dev/vda2 I am able to boot, but fsck is ran to repair
damage done.

>
> I am attaching both log (starting after reboot command)
> and the configuration used for the vm.
>

Since this was the first reconfigure after the system obtained by guix
system image, the log isn't exactly accurate to what would happen on
subsequent reconfigures.

The previous time the error was that / is busy. Maybe it was because of a
change in the filesystem services from the initial image to custom
config with `file-systems`
While that is definitely an issue as well, it might not be completely
related to the issue reported here by others. (imo there should be a way
for cases where the user is making big changes like changing file
systems to tell reconfigure to not apply it to the running system, to
only apply the bootloader and switch only after boot)

I am attaching log of reboot/halt after subsequent reconfigures where
the issue is manifested a bit differently. It is not / that would be
busy, but /run/user that is busy. I still think it could be because of
wrong order of stopping services, /run/user/0 is unmounted last,
but root file system tries to be unmounted prior to that.

Note that this doesn't happen without a reconfigure, I get this behavior
only after a reconfigure. The reconfigure can happen with no changes to
the config nor guix instance ran. I get this behavior consistently
on every reconfigure ran!

[  202.675565] shepherd[1]: Ignoring error while stopping root-file-system: (system-error "umount" "~S: ~A" ("/run/user" "Device or resource busy") (16))

Regards,
and apologies for two messages when it could've been one if I paid
more attention.
Rutherther


--=-=-=
Content-Type: text/plain
Content-Disposition: attachment; filename=reboot_log
Content-Description: reboot log

[ 2532.130331] shepherd[1]: Terminating system log service.
[ 2532.138540] shepherd[1]: Service system-log stopped.
[ 2532.145581] shepherd[1]: Service system-log is now stopped.
[ 2532.149364] shepherd[1]: Closing 4 system log ports.
[ 2532.151578] shepherd[1]: Service term-console is not running.
[ 2532.154795] shepherd[1]: Service term-tty1 is not running.
[ 2532.159702] shepherd[1]: Service term-tty2 is not running.
[ 2532.165720] shepherd[1]: Service term-tty3 is not running.
[ 2532.174412] shepherd[1]: Service term-tty4 is not running.
[ 2532.176655] shepherd[1]: Service term-tty5 is not running.
[ 2532.179148] shepherd[1]: Service term-tty6 is not running.
[ 2532.182485] shepherd[1]: Stopping service loopback...
[ 2532.194841] shepherd[1]: Registering new logger for loopback.
[ 2532.245307] shepherd[1]: Service loopback might have failed to stop.
[ 2532.247610] shepherd[1]: Service loopback is now stopped.
[ 2532.257829] shepherd[1]: Stopping service guix-daemon...
[ 2532.262768] shepherd[1]: Service guix-daemon stopped.
[ 2532.269632] shepherd[1]: Service guix-daemon is now stopped.
[ 2532.274953] shepherd[1]: Stopping service timer...
[ 2532.277806] shepherd[1]: Service timer stopped.
[ 2532.279442] shepherd[1]: Service timer is now stopped.
[ 2532.283475] shepherd[1]: Stopping service transient...
[ 2532.287844] shepherd[1]: Service transient stopped.
[ 2532.289999] shepherd[1]: Service transient is now stopped.
[ 2532.293995] shepherd[1]: Stopping service log-cleanup...
[ 2532.297223] shepherd[1]: Terminating timer 'log-cleanup' with 0 processes running.
[ 2532.300247] shepherd[1]: Service log-cleanup stopped.
[ 2532.301978] shepherd[1]: Service log-cleanup is now stopped.
[ 2532.306241] shepherd[1]: Stopping service user-processes...
[ 2532.311358] shepherd[1]: sending all processes the TERM signal
[ 2532.315239] shepherd[1]: Service udev has been disabled.
[ 2536.356551] shepherd[1]: all processes have been terminated
[ 2536.365466] shepherd[1]: Service user-processes stopped.
[ 2536.374333] shepherd[1]: Service user-processes is now stopped.
[ 2536.378815] shepherd[1]: Stopping service urandom-seed...
[ 2536.386166] shepherd[1]: Service urandom-seed might have failed to stop.
[ 2536.389012] shepherd[1]: Service urandom-seed is now stopped.
[ 2536.391950] shepherd[1]: Service guix-daemon is not running.
[ 2536.399246] shepherd[1]: Service nscd is not running.
[ 2536.402536] shepherd[1]: Stopping service log-rotation...
[ 2536.408077] shepherd[1]: Terminating timer 'log-rotation' with 0 processes running.
[ 2536.412356] shepherd[1]: Service log-rotation stopped.
[ 2536.415228] shepherd[1]: Service log-rotation is now stopped.
[ 2536.418957] shepherd[1]: Service timer is not running.
[ 2536.426109] shepherd[1]: Service transient is not running.
[ 2536.429836] shepherd[1]: Service log-cleanup is not running.
[ 2536.436242] shepherd[1]: Service udev is not running.
[ 2536.439446] shepherd[1]: Service pam is not running.
[ 2536.444939] shepherd[1]: Service user-processes is not running.
[ 2536.449993] shepherd[1]: Stopping service file-systems...
[ 2536.454141] shepherd[1]: Service file-systems stopped.
[ 2536.457264] shepherd[1]: Service file-systems is now stopped.
[ 2536.462044] shepherd[1]: Stopping service file-system-/var/lib/gdm...
[ 2536.469161] shepherd[1]: Service file-system-/var/lib/gdm stopped.
[ 2536.477353] shepherd[1]: Service file-system-/var/lib/gdm is now stopped.
[ 2536.482038] shepherd[1]: Stopping service file-system-/var/cache/fontconfig...
[ 2536.489787] shepherd[1]: Service file-system-/var/cache/fontconfig stopped.
[ 2536.493564] shepherd[1]: Service file-system-/var/cache/fontconfig is now stopped.
[ 2536.502552] shepherd[1]: Stopping service file-system-/sys/fs/cgroup/elogind...
[ 2536.506804] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind stopped.
[ 2536.512288] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind is now stopped.
[ 2536.525624] shepherd[1]: Stopping service file-system-/sys/fs/cgroup...
[ 2536.529952] shepherd[1]: Service file-system-/sys/fs/cgroup stopped.
[ 2536.533503] shepherd[1]: Service file-system-/sys/fs/cgroup is now stopped.
[ 2536.538327] shepherd[1]: Stopping service file-system-/run/user...
[ 2536.546013] shepherd[1]: Ignoring error while stopping root-file-system: (system-error "umount" "~S: ~A" ("/run/user" "Device or resource busy") (16))
[ 2536.553455] shepherd[1]: Service file-system-/run/user might have failed to stop.
[ 2536.557119] shepherd[1]: Service file-system-/run/user is now stopped.
[ 2536.559216] shepherd[1]: Service file-system-/var/lib/gdm is not running.
[ 2536.565337] shepherd[1]: Service file-system-/var/cache/fontconfig is not running.
[ 2536.569070] shepherd[1]: Service file-system-/sys/fs/cgroup is not running.
[ 2536.572297] shepherd[1]: Service file-system-/sys/fs/cgroup/elogind is not running.
[ 2536.577438] shepherd[1]: Service file-system-/run/user is not running.
[ 2536.582456] shepherd[1]: Stopping service file-system-/run/systemd...
[ 2536.587808] shepherd[1]: Service file-system-/run/systemd stopped.
[ 2536.590608] shepherd[1]: Service file-system-/run/systemd is now stopped.
[ 2536.595648] shepherd[1]: Stopping service file-system-/gnu/store...
[ 2536.598653] shepherd[1]: Service file-system-/gnu/store stopped.
[ 2536.600495] shepherd[1]: Service file-system-/gnu/store is now stopped.
[ 2536.606699] shepherd[1]: Stopping service file-system-/sys/firmware/efi/efivars...
[ 2536.610370] shepherd[1]: Service file-system-/sys/firmware/efi/efivars stopped.
[ 2536.613303] shepherd[1]: Service file-system-/sys/firmware/efi/efivars is now stopped.
[ 2536.618469] shepherd[1]: Stopping service file-system-/dev/shm...
[ 2536.622009] shepherd[1]: Service file-system-/dev/shm stopped.
[ 2536.629474] shepherd[1]: Service file-system-/dev/shm is now stopped.
[ 2536.639038] shepherd[1]: Stopping service file-system-/sys/kernel/debug...
[ 2536.643328] shepherd[1]: Service file-system-/sys/kernel/debug stopped.
[ 2536.648765] shepherd[1]: Service file-system-/sys/kernel/debug is now stopped.
[ 2536.656363] shepherd[1]: Stopping service file-system-/dev/pts...
[ 2536.661035] shepherd[1]: Service file-system-/dev/pts stopped.
[ 2536.665900] shepherd[1]: Service file-system-/dev/pts is now stopped.
[ 2536.671988] shepherd[1]: Stopping service user-file-systems...
[ 2536.679312] shepherd[1]: unmounting '/run/user/0'...
[ 2536.682633] shepherd[1]: Service user-file-systems stopped.
[ 2536.689969] shepherd[1]: Service user-file-systems is now stopped.
[ 2536.695255] shepherd[1]: Service file-systems is not running.
[ 2536.702030] shepherd[1]: Service host-name is not running.
[ 2536.708718] ACPI: PM: Preparing to enter system sleep state S5
[ 2536.711132] reboot: Restarting system
[ 2536.712438] reboot: machine restart
--=-=-=--

Message sent to bug-guix@HIDDEN:

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Subject: bug#77086: Filesystems not unmounted on reboot
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From: Rutherther <rutherther@HIDDEN>
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Date: Fri, 21 Mar 2025 19:57:31 +0100
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 Content preview:  Hello, I was testing on commmit Ian sent to reproduce, and
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 Content preview:  Hello, I was testing on commmit Ian sent to reproduce, and
    now moved to newest guix, seems to have been solved (at least the specific
    error I was getting), possibly by shepherd 1.0.3 update. With newest guix
    both the first reconfigure of guix system image and subsequent ones are fine.
    
 
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Hello,

I was testing on commmit Ian sent to reproduce, and now moved to
newest guix, seems to have been solved (at least the specific error I
was getting),
possibly by shepherd 1.0.3 update.

With newest guix both the first reconfigure of guix system image
and subsequent ones are fine.

Let me know if you're still experiencing this issue after updating
and I might try harder to reproduce if I got a different issue on first
try. I am afraid this will be hard to debug on real hw as you don't
really get the log in /var/log/messages for shutting down the system, I
had to get it through a serial line via stdout of qemu.

Also I was able to reproduce the issue on the older
guix just by running the shepherd services upgrade scm script,
no need for full reconfigure, this shows that something has gone
wrong when shepherd was reloading the services. Do we have some kind of
a test for this in guix / shepherd so it can't happen anymore in the future?

Message sent to bug-guix@HIDDEN:

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On Fri, Mar 21, 2025 at 05:50:51PM +0100, Rutherther via Bug reports for GNU Guix wrote:
> I am writing with an update, because not everything I wrote in the first
> e-mail was true exactly. Please let me know if updates distrub you and I
> won't be CCing you again.

Please don't hesitate to send these kinds of investigations again! It's
helpful.

Message sent to bug-guix@HIDDEN:

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On Fri, Mar 21, 2025 at 05:50:51PM +0100, Rutherther via Bug reports for GNU Guix wrote:
> I am writing with an update, because not everything I wrote in the first
> e-mail was true exactly. Please let me know if updates distrub you and I
> won't be CCing you again.

Please don't hesitate to send these kinds of investigations again! It's
helpful.

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From: Ian Eure <ian@HIDDEN>
Date: Fri, 28 Mar 2025 08:40:01 -0700
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I=E2=80=99m still seeing this problem on at least one machine.

Here=E2=80=99s the system configuration: https://paste.debian.net/1365931/

It depends on my personal channel:=20
https://codeberg.org/ieure/atomized-guix

I captured the state of the machine just now, then ran `sync' and=20
`sudo reboot'.  It fsck=E2=80=99d on boot.

Script started on 2025-03-28 08:32:12-07:00 [TERM=3D"dumb"=20
TTY=3D"/dev/pts/1" COLUMNS=3D"191" LINES=3D"39"]
isot0pe!ieure:~$ w
 08:32:13 up 2 days, 19:43,  2 users,  load average: 1.23, 0.34,=20
 0.12
USER     TTY        LOGIN@   IDLE   JCPU   PCPU WHAT
ieure    seat0     Tue13    0.00s  0.00s  0.03s=20
/gnu/store/wpdr1pfczc5a5yn7ii80qjgcgdv42jr2-gdm-46.2/libexec/gdm-x-session=
=20
--register-session --run-script=20
/gnu/store/mmw3bf5wachcd96i84770yzf
ieure    :0        Tue13   ?xdm?   1:59   0.03s=20
/gnu/store/wpdr1pfczc5a5yn7ii80qjgcgdv42jr2-gdm-46.2/libexec/gdm-x-session=
=20
--register-session --run-script=20
/gnu/store/mmw3bf5wachcd96i84770yzf
isot0pe!ieure:~$ guix describe
Generation 62	Mar 25 2025 11:59:36	(current)
  guix dbef60e
    repository URL: https://git.savannah.gnu.org/git/guix.git
    branch: master
    commit: dbef60edb356246855ad6749936ee511fc1a9b4b
  atomized f6fba0e
    repository URL: https://codeberg.org/ieure/atomized-guix.git
    branch: main
    commit: f6fba0e2b207b69ab093f2be47b306242c748ab8
  nonguix a96e245
    repository URL: https://gitlab.com/nonguix/nonguix
    branch: master
    commit: a96e2451bda5aaf9b48339edee392c6a3017d730
isot0pe!ieure:~$ guix system describe
Generation 49	Mar 25 2025 12:05:36	(current)
  file name: /var/guix/profiles/system-49-link
  canonical file name:=20
  /gnu/store/wkzxc2nbiydwr42v8a0702xl128n65b0-system
  label: GNU with Linux 6.13.7
  bootloader: grub-efi
  root device: /dev/mapper/cryptroot
  kernel:=20
  /gnu/store/5mac890q3yhfi6pvxdl8mmpyngmra5s0-linux-6.13.7/bzImage
  channels:
    guix:
      repository URL: https://git.savannah.gnu.org/git/guix.git
      branch: master
      commit: dbef60edb356246855ad6749936ee511fc1a9b4b
    atomized:
      repository URL: https://codeberg.org/ieure/atomized-guix.git
      branch: main
      commit: f6fba0e2b207b69ab093f2be47b306242c748ab8
    nonguix:
      repository URL: https://gitlab.com/nonguix/nonguix
      branch: master
      commit: a96e2451bda5aaf9b48339edee392c6a3017d730
  configuration file:=20
  /gnu/store/dhmn4825hvfvkbfbvb7xg6rkhdcj38ii-configuration.scm
isot0pe!ieure:~$ exit

Script done on 2025-03-28 08:32:30-07:00 [COMMAND_EXIT_CODE=3D"0"]

 -- Ian

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Hi all,

Here=E2=80=99s a less dead link to the config for my system exhibiting the=
=20
problem: https://paste.debian.net/1366307/

I set it to never expire this time.

The FS stuff is very pedestrian, it=E2=80=99s more or less what the=20
graphical installer generates, since that=E2=80=99s how I installed that=20
system.

Thanks,
  -- Ian

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Hi,

Rutherther <rutherther@HIDDEN> skribis:

> I was testing on commmit Ian sent to reproduce, and now moved to
> newest guix, seems to have been solved (at least the specific error I
> was getting),
> possibly by shepherd 1.0.3 update.
>
> With newest guix both the first reconfigure of guix system image
> and subsequent ones are fine.

I believe I=E2=80=99m still experiencing it on my laptop (but it=E2=80=99s =
harmless, I
only briefly see e2fsck saying =E2=80=9Crecovering journal=E2=80=9D at boot=
 time), but
of course, not the slightest clue in /var/log/messages.

> Let me know if you're still experiencing this issue after updating
> and I might try harder to reproduce if I got a different issue on first
> try. I am afraid this will be hard to debug on real hw as you don't
> really get the log in /var/log/messages for shutting down the system, I
> had to get it through a serial line via stdout of qemu.
>
> Also I was able to reproduce the issue on the older
> guix just by running the shepherd services upgrade scm script,
> no need for full reconfigure, this shows that something has gone
> wrong when shepherd was reloading the services. Do we have some kind of
> a test for this in guix / shepherd so it can't happen anymore in the futu=
re?

There=E2=80=99s a system test, =E2=80=9Croot-unmount=E2=80=9D in (gnu tests=
 base), but it
succeeds: <https://ci.guix.gnu.org/build/9790935/details>.

Perhaps the problem only shows up with more complex system configs?
My root partition is on a LUKS device, but I think the problem is more
something like EBUSY upon =E2=80=98umount=E2=80=99 due to stale processes.

Thanks,
Ludo=E2=80=99.

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Hello Ludo,

Ludovic Court=C3=A8s <ludo@HIDDEN> writes:

> Hi,
>
> Rutherther <rutherther@HIDDEN> skribis:
>
>> I was testing on commmit Ian sent to reproduce, and now moved to
>> newest guix, seems to have been solved (at least the specific error I
>> was getting),
>> possibly by shepherd 1.0.3 update.
>>
>> With newest guix both the first reconfigure of guix system image
>> and subsequent ones are fine.
>
> I believe I=E2=80=99m still experiencing it on my laptop (but it=E2=80=99=
s harmless, I
> only briefly see e2fsck saying =E2=80=9Crecovering journal=E2=80=9D at bo=
ot time), but
> of course, not the slightest clue in /var/log/messages.

To make it more clear, what I was able to get in the VM was full disk
recovery that was clearing wrong inodes, every time and I even got disk
corruptions for the files produced during reconfigure (which was the
last thing I did before reboot). So I am not sure if this is the same
thing, do you know, is this one line printed only when there is
something wrong with the journal, or is it printed every time like sort
of a 'welcome' message?

>
>> Let me know if you're still experiencing this issue after updating
>> and I might try harder to reproduce if I got a different issue on first
>> try. I am afraid this will be hard to debug on real hw as you don't
>> really get the log in /var/log/messages for shutting down the system, I
>> had to get it through a serial line via stdout of qemu.
>>
>> Also I was able to reproduce the issue on the older
>> guix just by running the shepherd services upgrade scm script,
>> no need for full reconfigure, this shows that something has gone
>> wrong when shepherd was reloading the services. Do we have some kind of
>> a test for this in guix / shepherd so it can't happen anymore in the fut=
ure?
>
> There=E2=80=99s a system test, =E2=80=9Croot-unmount=E2=80=9D in (gnu tes=
ts base), but it
> succeeds: <https://ci.guix.gnu.org/build/9790935/details>.

Thanks for pointing out this test, good to know about it, although it's
not exactly what I had in mind. I was able to reproduce previously by
running the upgrade-shepherd-services.scm that is ran upon reconfigure,
without it, root fs unmounted cleanly. So the test I had in mind would
be to test that when shepherd is upgraded like this, there aren't
changes to how the services are stopped.

>
> Perhaps the problem only shows up with more complex system configs?
> My root partition is on a LUKS device, but I think the problem is more
> something like EBUSY upon =E2=80=98umount=E2=80=99 due to stale processes.

I've tried reproducing with bjoli's config last friday, they were
experiencing it and sent their config to IRC chat. I was unable to
reproduce (though I have to confess I changed the fs to ext4 for my
convenience).
So I am not sure if it is reproducible even given a config (though maybe
something is relevant on the vm vs real machine boot, but I wouldn't
expect it...)

I have yet to try Ian's config, but it's going to take me some time to
get to it as their config is more complicated, mainly the network disk,
which I would like to not skip any disk related stuff (and I think Ian
is missing file-systems requirement on their shepherd autofs service,
but it shouldn't really cause this issue as root filesystem unmount
should be recursive).

Regards,
Rutherther

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Hello,

Rutherther <rutherther@HIDDEN> skribis:

>> There=E2=80=99s a system test, =E2=80=9Croot-unmount=E2=80=9D in (gnu te=
sts base), but it
>> succeeds: <https://ci.guix.gnu.org/build/9790935/details>.
>
> Thanks for pointing out this test, good to know about it, although it's
> not exactly what I had in mind. I was able to reproduce previously by
> running the upgrade-shepherd-services.scm that is ran upon reconfigure,
> without it, root fs unmounted cleanly. So the test I had in mind would
> be to test that when shepherd is upgraded like this, there aren't
> changes to how the services are stopped.

I=E2=80=99m not sure I understand: do you have a reproducer in a VM, either
manual or automatic?  If you do, please share; if it=E2=80=99s manual, you =
can
share the steps you followed.

Thanks in advance! :-)

Ludo=E2=80=99.

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Hello, yes, I shared a (manual) reproducer earlier in this thread=2E But as=
 I was saying, it was only for commits from Ian's initial email=2E I was un=
able to reproduce with same steps after updating to newest (which among oth=
er things has shepherd 1=2E0=2E3, but I havent bisected to see what commit =
has fixed the case I got into)=2E Unfortunately people still seem to experi=
ence it, so I must have seen other issue / just one possible cause of this =
one when there are several=2E I havent sent the final config, one change to=
 it I shared was just mentioned in text=2E I can send the final config late=
r=2E I was able to get error on unmounting every time I run reconfigure or =
just the upgrade shepherd services script=2E


On April 3, 2025 11:19:45 AM GMT+02:00, "Ludovic Court=C3=A8s" <ludo@gnu=
=2Eorg> wrote:
>Hello,
>
>Rutherther <rutherther@ditigal=2Exyz> skribis:
>
>>> There=E2=80=99s a system test, =E2=80=9Croot-unmount=E2=80=9D in (gnu =
tests base), but it
>>> succeeds: <https://ci=2Eguix=2Egnu=2Eorg/build/9790935/details>=2E
>>
>> Thanks for pointing out this test, good to know about it, although it's
>> not exactly what I had in mind=2E I was able to reproduce previously by
>> running the upgrade-shepherd-services=2Escm that is ran upon reconfigur=
e,
>> without it, root fs unmounted cleanly=2E So the test I had in mind woul=
d
>> be to test that when shepherd is upgraded like this, there aren't
>> changes to how the services are stopped=2E
>
>I=E2=80=99m not sure I understand: do you have a reproducer in a VM, eith=
er
>manual or automatic?  If you do, please share; if it=E2=80=99s manual, yo=
u can
>share the steps you followed=2E
>
>Thanks in advance! :-)
>
>Ludo=E2=80=99=2E

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Hi,

On Tue, Apr 01 2025, Ludovic Court=C3=A8s wrote:

> I believe I=E2=80=99m still experiencing it on my laptop

Unmounting properly is great, but would it also make sense to add a call
to sync(2) after a reconfigure since some people reboot quickly?

Kind regards
Felix

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Felix Lechner <felix.lechner@HIDDEN> skribis:

> On Tue, Apr 01 2025, Ludovic Court=C3=A8s wrote:
>
>> I believe I=E2=80=99m still experiencing it on my laptop
>
> Unmounting properly is great, but would it also make sense to add a call
> to sync(2) after a reconfigure since some people reboot quickly?

The =E2=80=98root-file-system=E2=80=99 service calls =E2=80=98sync=E2=80=99=
 when shutting down.

Ludo=E2=80=99.

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Hi,

recently I switched from power-profiles-daemon to tlp. I am experiencing
this issue from time to time! I don't know the exact trigger nor am able
to 'reproduce' it, it happens just sometimes.
I wasn't experiencing this issue before.

This seems to me that tlp could be (one of the) trigger(s) of this bug, som=
ehow.

I checked tlp's systemd service and it seems to be working the same way
the shepherd one does, so I don't really get why that would happen.

Ludovic Court=C3=A8s <ludo@HIDDEN> writes:

> Felix Lechner <felix.lechner@HIDDEN> skribis:
>
>> On Tue, Apr 01 2025, Ludovic Court=C3=A8s wrote:
>>
>>> I believe I=E2=80=99m still experiencing it on my laptop
>>
>> Unmounting properly is great, but would it also make sense to add a call
>> to sync(2) after a reconfigure since some people reboot quickly?
>
> The =E2=80=98root-file-system=E2=80=99 service calls =E2=80=98sync=E2=80=
=99 when shutting down.

Why then are people ending up with corrupt store, I don't really get it.
Is sync really doing full sync to the disk? Shepherd doesn't shutdown
the system until the service stops, successfully or not, right? So it
should be called on every shutdown/reboot.

Regards,
Rutherther

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Date: Tue, 29 Apr 2025 20:41:46 +0000
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From: "Ashish SHUKLA" <ashish.is@HIDDEN>
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Hi,

Filesystems not unmounted on reboot, or rather I get filesystem check for "=
/" volume after I power on, even though I shut it down (as rebooting was en=
ding up in this situation almost everytime). This only happens if I do "sud=
o guix system reconfigure" prior to reboot/shutdown. Of note is, I'm runnin=
g a custom Linux kernel (linux-xanmod in my custom channel):

=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
% lsblk
NAME             MAJ:MIN RM   SIZE RO TYPE  MOUNTPOINTS
nvme0n1          259:0    0 931,5G  0 disk =20
=E2=94=9C=E2=94=80nvme0n1p1      259:1    0   512M  0 part  /boot
=E2=94=9C=E2=94=80nvme0n1p2      259:2    0     4G  0 part  [SWAP]
=E2=94=9C=E2=94=80nvme0n1p3      259:3    0   696G  0 part =20
=E2=94=82 =E2=94=94=E2=94=80cryptroot    253:0    0   696G  0 crypt=20
=E2=94=82   =E2=94=9C=E2=94=80crypt-root 253:1    0   250G  0 lvm   /gnu/st=
ore
=E2=94=82   =E2=94=82                                       /
=E2=94=82   =E2=94=94=E2=94=80crypt-home 253:2    0   446G  0 lvm   /home
=E2=94=94=E2=94=80nvme0n1p4      259:4    0   231G  0 part =20

% guix describe
Generaci=C3=B3n 169	28 abr 2025 22:15:25	(actual)
  guix 1710c09
    URL del repositorio: https://codeberg.org/guix/guix-mirror
    rama: master
    revisi=C3=B3n: 1710c0941db517453ac2b88c0e854e8348172603
  nonguix f05b33d
    URL del repositorio: https://gitlab.com/nonguix/nonguix
    /rama: master
    revisi=C3=B3n: f05b33d75491a6418e7f0b3575207c5c2b2ef8f1
  abbe 673623e
    URL del repositorio: https://codeberg.org/group/guix-modules
    rama: mainline
    revisi=C3=B3n: 673623e0abc60eff50b133e74d15ee89eb9f6087
  abbe-emacs 9394d74
    URL del repositorio: https://git.sr.ht/~abbe/guix-emacs-channel
    rama: mainline
    revisi=C3=B3n: 9394d749ea88b72173f08f99210b8b81c9e5e47f
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D

In terms of filesystems, I have:

 - / ext4 as LVM LV over LUKS2 volume cryptroot
 - /home ext4 as LVM LV over LUKS2 volume cryptroot
 - /boot vfat a separte EFI partition
 - /tmp tmpfs

Unfortunately, nothing in /var/log/messages that could hint what happens at=
 the lat moments before reboot/shutdown, and quite often, I end up with NUL=
 bytes in the log file:

=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D
000592a0  78 77 6e 2d 6f 70 65 6e  72 65 73 6f 6c 76 2d 33  |xwn-openresolv=
-3|
000592b0  2e 31 33 2e 32 2f 73 62  69 6e 2f 72 65 73 6f 6c  |.13.2/sbin/res=
ol|
000592c0  76 63 6f 6e 66 0a 00 00  00 00 00 00 00 00 00 00  |vconf.........=
..|
000592d0  00 00 00 00 00 00 00 00  00 00 00 00 00 00 00 00  |..............=
..|
*
0005a000  32 30 32 35 2d 30 34 2d  32 39 20 31 39 3a 35 30  |2025-04-29 19:=
50|
0005a010  3a 33 32 20 6c 6f 63 61  6c 68 6f 73 74 20 73 68  |:32 localhost =
sh|
0005a020  65 70 68 65 72 64 5b 31  5d 3a 20 5b 73 79 73 63  |epherd[1]: [sy=
sc|
0005a030  74 6c 5d 20 6e 65 74 2e  69 70 76 34 2e 74 63 70  |tl] net.ipv4.t=
cp|
0005a040  5f 77 69 6e 64 6f 77 5f  73 63 61 6c 69 6e 67 20  |_window_scalin=
g |
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D

It's sometimes broken /gnu/store as well. Sometimes empty/broken initrds, w=
hich I was able to salvage by booting previous entries. To minimize damage =
to /gnu/store, I try to explicit "sync" after "sudo guix system reconfigure=
", but the problem is still there with log files, at least.

Also, as I use custom mountpoints (i.e. /home, /tmp), do I need to specify =
file-system dependencies in my custom filesystem mountpoints, i.e. /boot, /=
home, /tmp, all depending on "/" ? Right now, I only have mapped-devices de=
pendencies (for the LUKS2 volume) in the definitions for / and /home filesy=
stems which reside on a LVM volume backed by LUKS2 volume.

Anyways, if there is anything I can help with to get to the bottom of this,=
 then I'll be happy help. It's quite annoying, almost making me stop using,=
 so any help is appreciated.

Thanks!
--=20
Ashish SHUKLA | GPG: F682 CDCC 39DC 0FEA E116  20B6 C746 CFA9 E74F A4B0

"If I destroy you, what business is it of yours ?" (Dark Forest, Liu Cixin)

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Subject: bug#77963: Data corruption on reboot
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merge 77963 77086
thanks

Last modified: Thu, 1 May 2025 23:45:02 UTC

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