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Subject: bug#44256: =?UTF-8?Q?=E2=80=9Cguix?= import cran -a bioconductor =?UTF-8?Q?FOO=E2=80=9D?= downloads twice
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Dear,

--8<---------------cut here---------------start------------->8---
$ guix import cran -a bioconductor CATALYST

Starting download of /tmp/guix-file.OPtOW1
From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_1.=
12.2.tar.gz...
 =E2=80=A612.2.tar.gz  10.2MiB                567KiB/s 00:18 [#############=
#####] 100.0%

Starting download of /tmp/guix-file.V6sC1Z
From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_1.=
12.2.tar.gz...
 =E2=80=A612.2.tar.gz  10.2MiB                565KiB/s 00:19 [#############=
#####] 100.0%
--8<---------------cut here---------------end--------------->8---

I have not investigated more, if the issue is from the importer or from
the information provided by Bioconductor.


All the best,
simon

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From: help-debbugs@HIDDEN (GNU bug Tracking System)
To: zimoun <zimon.toutoune@HIDDEN>
Subject: bug#44256: Acknowledgement (=?UTF-8?Q?=E2=80=9Cguix?= import cran
 -a bioconductor =?UTF-8?Q?FOO=E2=80=9D?= downloads twice)
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Date: Tue, 27 Oct 2020 13:56:02 +0000

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Subject: bug#44256: =?UTF-8?Q?=E2=80=9Cguix?= import cran -a bioconductor =?UTF-8?Q?FOO=E2=80=9D?= downloads twice
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From: zimoun <zimon.toutoune@HIDDEN>
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Date: Thu, 25 Feb 2021 16:28:26 +0100
In-Reply-To: <865z6v4vuw.fsf@HIDDEN> (zimoun's message of "Tue, 27 Oct 2020
 14:55:03 +0100")
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 Content preview:  Hi, On Tue, 27 Oct 2020 at 14:55, zimoun wrote: > $ guix import
    cran -a bioconductor CATALYST > > Starting download of /tmp/guix-file.OPtOW1
    >>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_1.12.2.tar.gz...
    > =?UTF-8?Q?=E2=80=A612.2.tar.g?= [...] 
 
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 Content preview:  Hi, On Tue, 27 Oct 2020 at 14:55, zimoun wrote: > $ guix import
    cran -a bioconductor CATALYST > > Starting download of /tmp/guix-file.OPtOW1
    >>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_1.12.2.tar.gz...
    > =?UTF-8?Q?=E2=80=A612.2.tar.g?= [...] 
 
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Hi,

On Tue, 27 Oct 2020 at 14:55, zimoun <zimon.toutoune@HIDDEN> wrote:

> $ guix import cran -a bioconductor CATALYST
>
> Starting download of /tmp/guix-file.OPtOW1
>>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_=
1.12.2.tar.gz...
>  =E2=80=A612.2.tar.gz  10.2MiB                567KiB/s 00:18 [###########=
#######] 100.0%
>
> Starting download of /tmp/guix-file.V6sC1Z
>>From https://bioconductor.org/packages/release/bioc/src/contrib/CATALYST_=
1.12.2.tar.gz...
>  =E2=80=A612.2.tar.gz  10.2MiB                565KiB/s 00:19 [###########=
#######] 100.0%
>
> I have not investigated more, if the issue is from the importer or from
> the information provided by Bioconductor.

It comes from =E2=80=99cran->guix-package=E2=80=99 in (guix import cran):

--8<---------------cut here---------------start------------->8---
     (let ((description (fetch-description repo package-name)))
       (if description
           (description->package repo description)
--8<---------------cut here---------------end--------------->8---

where =E2=80=99fetch-description=E2=80=99 effectively downloads but then
=E2=80=99description->package=E2=80=99 downloads again:

--8<---------------cut here---------------start------------->8---
         (source     (download source-url #:method (cond
                                                    (git? 'git)
                                                    (hg? 'hg)
                                                    (else #f))))
--8<---------------cut here---------------end--------------->8---

This second download is not necessary.  The fix needs some care with the
different repositories.


Cheers,
simon

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