GNU bug report logs - #49985
Bootstrap packages fail to build due to mes-libc lacking 'stat64' etc. syscalls

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Package: guix; Severity: important; Reported by: Carl Dong <contact@HIDDEN>; merged with #41264; dated Tue, 10 Aug 2021 19:42:02 UTC; Maintainer for guix is bug-guix@HIDDEN.
Severity set to 'important' from 'normal' Request was from Ludovic Courtès <ludo@HIDDEN> to control <at> debbugs.gnu.org. Full text available.
Changed bug title to 'Bootstrap packages fail to build due to mes-libc lacking 'stat64' etc. syscalls' from 'bash-mesboot0: Inscrutable error in build phase' Request was from Ludovic Courtès <ludo@HIDDEN> to control <at> debbugs.gnu.org. Full text available.
Merged 41264 49985. Request was from Ludovic Courtès <ludo@HIDDEN> to control <at> debbugs.gnu.org. Full text available.

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Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
From: Carl Dong <contact@HIDDEN>
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Mathieu,

I think this was exactly the problem, because mounting a tmpfs at /tmp =
solved it. Thanks for your help!

Cheers,
Carl Dong

> On Aug 19, 2021, at 12:20 PM, Mathieu Othacehe <othacehe@HIDDEN> =
wrote:
>=20
>=20
> Hello Carl,
>=20
>> The error line is L1299: "make: stat:Makefile: sterror: unknown =
error=E2=80=9D
>=20
> This reminds me of:
> https://lists.gnu.org/archive/html/bug-guix/2020-05/msg00335.html.
>=20
> I never took the time to fix this issue. Bottom line is that building
> the bootstrap toolchain fails on NVME disks because some syscalls
> (stat64, lstat64 and fstat64) need to be implemented in GNU Mes.
>=20
> There's a small demonstration program that you can use to demonstrate
> this theory :).
>=20
> Thanks,
>=20
> Mathieu





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bug#49985; Package guix. Full text available.

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From: Mathieu Othacehe <othacehe@HIDDEN>
To: Carl Dong <contact@HIDDEN>
Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
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Hello Carl,

> The error line is L1299: "make: stat:Makefile: sterror: unknown error=E2=
=80=9D

This reminds me of:
https://lists.gnu.org/archive/html/bug-guix/2020-05/msg00335.html.

I never took the time to fix this issue. Bottom line is that building
the bootstrap toolchain fails on NVME disks because some syscalls
(stat64, lstat64 and fstat64) need to be implemented in GNU Mes.

There's a small demonstration program that you can use to demonstrate
this theory :).

Thanks,

Mathieu




Information forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.

Message received at 49985 <at> debbugs.gnu.org:


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Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
From: Carl Dong <contact@HIDDEN>
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No worries! We=E2=80=99re all learning :-)
I ended up asking my colleague to use:

strace --env=3DMES_DEBUG=3D1

We=E2=80=99ll see what happens!

> On Aug 11, 2021, at 8:53 AM, Bengt Richter <bokr@HIDDEN> wrote:
>=20
> Just this disclaimer:
> I am just a lurker interested in mes, not a mes developer or team =
member.
> (I am trying to do some minimal stuff too, so I cloned the mes repo =
and pull once
> in a while to see what's going on :)
>=20
> Sorry for any implication that I really know anything about mes ;/
>=20
> On +2021-08-11 03:21:18 +0200, Bengt Richter wrote:
>> On +2021-08-11 02:38:54 +0200, Bengt Richter wrote:
>>> On +2021-08-10 15:41:25 -0400, Carl Dong wrote:
>>>> Hi all,
>>>>=20
>>>> While setting up Guix for a community member of mine, we =
encountered this somewhat inscrutable problem (I later learned this is =
not the first time Guix users have run into this problem!). When =
building =
/gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv, we =
encountered the following build failure: =
https://paste.sr.ht/~dongcarl/376b19b8349c329ed5329508c7fb43a7c3aec64b#2nv=
axgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.log-L1299
>>>>=20
>>>> The error line is L1299: "make: stat:Makefile: sterror: unknown =
error=E2=80=9D
>>>> --
>>>=20
>>> To me, sterror looks like a typo for strerror
>>> so grepping for sterror might find the typo, if that's what it is?
>>>=20
>> Looking at ./lib/mes/__mes_debug.c, it looks like you could =
set/export environment
>> MES_DEBUG=3D1 and run it again to see the error number =
./lib/string/strerror.c
>> (in git repo) doesn't like.
>>=20
>> Then run something like my error-printing kludge that will work on =
your system:
>>=20
>> I called it errno-grep
>> --8<---------------cut here---------------start------------->8---
>> #!/usr/bin/bash
>> if [ -z "$1" ];then
>>    echo "Usage: errno-grep [ grep switches for grepping the following =
files in order ]"
>>    echo "    /usr/include/asm-generic/errno-base.h"
>>    echo "    /usr/include/asm-generic/errno.h"
>>    exit 0
>> fi
>>=20
>> if [ "${1:0:1}" =3D=3D "-" ]; then
>>    exec grep "$@" /usr/include/asm-generic/errno-base.h =
/usr/include/asm-generic/errno.h
>> else
>>    exec egrep -wh "$@" /usr/include/asm-generic/errno-base.h =
/usr/include/asm-generic/errno.h
>> fi
>> --8<---------------cut here---------------end--------------->8---
>>=20
>> HTH.
>>=20
>>=20
>>=20
>=20
> --=20
> Regards,
> Bengt Richter





Information forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.

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Date: Wed, 11 Aug 2021 14:53:17 +0200
From: Bengt Richter <bokr@HIDDEN>
To: Carl Dong <contact@HIDDEN>
Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
Message-ID: <20210811125317.GA49029@LionPure>
References: <8DDCC02E-5D4A-4DF1-A893-229B58EBE31C@HIDDEN>
 <20210811003854.GA26014@LionPure> <20210811012118.GB26014@LionPure>
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Just this disclaimer:
I am just a lurker interested in mes, not a mes developer or team member.
(I am trying to do some minimal stuff too, so I cloned the mes repo and pull once
in a while to see what's going on :)

Sorry for any implication that I really know anything about mes ;/

On +2021-08-11 03:21:18 +0200, Bengt Richter wrote:
> On +2021-08-11 02:38:54 +0200, Bengt Richter wrote:
> > On +2021-08-10 15:41:25 -0400, Carl Dong wrote:
> > > Hi all,
> > > 
> > > While setting up Guix for a community member of mine, we encountered this somewhat inscrutable problem (I later learned this is not the first time Guix users have run into this problem!). When building /gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv, we encountered the following build failure: https://paste.sr.ht/~dongcarl/376b19b8349c329ed5329508c7fb43a7c3aec64b#2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.log-L1299
> > > 
> > > The error line is L1299: "make: stat:Makefile: sterror: unknown error”
> > >--
> > 
> > To me, sterror looks like a typo for strerror
> > so grepping for sterror might find the typo, if that's what it is?
> >
> Looking at ./lib/mes/__mes_debug.c, it looks like you could set/export environment
>  MES_DEBUG=1 and run it again to see the error number ./lib/string/strerror.c
> (in git repo) doesn't like.
> 
> Then run something like my error-printing kludge that will work on your system:
> 
> I called it errno-grep
> --8<---------------cut here---------------start------------->8---
> #!/usr/bin/bash
> if [ -z "$1" ];then
>     echo "Usage: errno-grep [ grep switches for grepping the following files in order ]"
>     echo "    /usr/include/asm-generic/errno-base.h"
>     echo "    /usr/include/asm-generic/errno.h"
>     exit 0
> fi
> 
> if [ "${1:0:1}" == "-" ]; then
>     exec grep "$@" /usr/include/asm-generic/errno-base.h /usr/include/asm-generic/errno.h
> else
>     exec egrep -wh "$@" /usr/include/asm-generic/errno-base.h /usr/include/asm-generic/errno.h
> fi
> --8<---------------cut here---------------end--------------->8---
> 
> HTH.
> 
> 
> 

-- 
Regards,
Bengt Richter




Information forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.

Message received at 49985 <at> debbugs.gnu.org:


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Date: Wed, 11 Aug 2021 03:21:18 +0200
From: Bengt Richter <bokr@HIDDEN>
To: Carl Dong <contact@HIDDEN>
Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
Message-ID: <20210811012118.GB26014@LionPure>
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On +2021-08-11 02:38:54 +0200, Bengt Richter wrote:
> On +2021-08-10 15:41:25 -0400, Carl Dong wrote:
> > Hi all,
> > 
> > While setting up Guix for a community member of mine, we encountered this somewhat inscrutable problem (I later learned this is not the first time Guix users have run into this problem!). When building /gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv, we encountered the following build failure: https://paste.sr.ht/~dongcarl/376b19b8349c329ed5329508c7fb43a7c3aec64b#2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.log-L1299
> > 
> > The error line is L1299: "make: stat:Makefile: sterror: unknown error”
> >--
> 
> To me, sterror looks like a typo for strerror
> so grepping for sterror might find the typo, if that's what it is?
>
Looking at ./lib/mes/__mes_debug.c, it looks like you could set/export environment
 MES_DEBUG=1 and run it again to see the error number ./lib/string/strerror.c
(in git repo) doesn't like.

Then run something like my error-printing kludge that will work on your system:

I called it errno-grep
--8<---------------cut here---------------start------------->8---
#!/usr/bin/bash
if [ -z "$1" ];then
    echo "Usage: errno-grep [ grep switches for grepping the following files in order ]"
    echo "    /usr/include/asm-generic/errno-base.h"
    echo "    /usr/include/asm-generic/errno.h"
    exit 0
fi

if [ "${1:0:1}" == "-" ]; then
    exec grep "$@" /usr/include/asm-generic/errno-base.h /usr/include/asm-generic/errno.h
else
    exec egrep -wh "$@" /usr/include/asm-generic/errno-base.h /usr/include/asm-generic/errno.h
fi
--8<---------------cut here---------------end--------------->8---

HTH.




Information forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.

Message received at 49985 <at> debbugs.gnu.org:


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Date: Wed, 11 Aug 2021 02:38:54 +0200
From: Bengt Richter <bokr@HIDDEN>
To: Carl Dong <contact@HIDDEN>
Subject: Re: bug#49985: bash-mesboot0: Inscrutable error in build phase
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On +2021-08-10 15:41:25 -0400, Carl Dong wrote:
> Hi all,
> 
> While setting up Guix for a community member of mine, we encountered this somewhat inscrutable problem (I later learned this is not the first time Guix users have run into this problem!). When building /gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv, we encountered the following build failure: https://paste.sr.ht/~dongcarl/376b19b8349c329ed5329508c7fb43a7c3aec64b#2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.log-L1299
> 
> The error line is L1299: "make: stat:Makefile: sterror: unknown error”
>--

To me, sterror looks like a typo for strerror
so grepping for sterror might find the typo, if that's what it is?

Regards,
Bengt Richter




Information forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.

Message received at submit <at> debbugs.gnu.org:


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Subject: bash-mesboot0: Inscrutable error in build phase
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Hi all,

While setting up Guix for a community member of mine, we encountered =
this somewhat inscrutable problem (I later learned this is not the first =
time Guix users have run into this problem!). When building =
/gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv, we =
encountered the following build failure: =
https://paste.sr.ht/~dongcarl/376b19b8349c329ed5329508c7fb43a7c3aec64b#2nv=
axgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.log-L1299

The error line is L1299: "make: stat:Makefile: sterror: unknown error=E2=80=
=9D

This failure persists even when ran with --cores=3D1, across reboots. =
I=E2=80=99ve even tried building that derivation with --check on my own =
machine (which successfully built that derivation), and every log line =
matched (plus or minus some timing log lines) up until L1299.

We=E2=80=99ve also tried rebuilding bash-mesboot0-2.05b.drv=E2=80=99s =
dependency =
/gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv =
with:

--8<---------------cut here---------------start------------->8---
guix gc --delete =
/gnu/store/prkqai3zwh3shlqpll6xyncmmqpj49dd-gash-boot-0.2.0
guix build --cores=3D1 =
/gnu/store/2nvaxgs0rdxfkrwklh622ggaxg0wap6n-bash-mesboot0-2.05b.drv
--8<---------------cut here---------------end--------------->8---

Which did not make a difference.

What is interesting is that this is not the first time this problem has =
cropped up for people. I see 2 past mentions of this exact error:
- Mentioned by kagevf on Dec 16th, 2020: =
https://logs.guix.gnu.org/guix/2020-12-16.log#043712
- Mentioned by genr8_ (with help from rekado_) on Mar 22nd, 2021: =
https://logs.guix.gnu.org/guix/2021-03-22.log#182406

I=E2=80=99m happy to spend energy investigating, but would love any =
pointers on what the most promising place to look is!

My friend's system is an Intel i5 system, running Guix 1.3.0 on Ubuntu. =
His /tmp is on the same partition as / and is ext4.

Cheers,
Carl Dong
contact@HIDDEN
"I fight for the users"





Acknowledgement sent to Carl Dong <contact@HIDDEN>:
New bug report received and forwarded. Copy sent to bug-guix@HIDDEN. Full text available.
Report forwarded to bug-guix@HIDDEN:
bug#49985; Package guix. Full text available.
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