X-Loop: help-debbugs@HIDDEN Subject: bug#77195: fenics-dolfin@HIDDEN: Fails to build, deprecated upstream. 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[86.8.111.200]) by smtp.gmail.com with ESMTPSA id 5b1f17b1804b1-43d4fd9ec84sm69429205e9.26.2025.03.22.17.04.58 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256); Sat, 22 Mar 2025 17:04:59 -0700 (PDT) From: Sharlatan Hellseher <sharlatanus@HIDDEN> Date: Sun, 23 Mar 2025 00:04:58 +0000 Message-ID: <875xk07gt1.fsf@HIDDEN> MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" Received-SPF: pass client-ip=2a00:1450:4864:20::32c; envelope-from=sharlatanus@HIDDEN; helo=mail-wm1-x32c.google.com X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, FREEMAIL_FROM=0.001, RCVD_IN_DNSWL_NONE=-0.0001, SPF_HELO_NONE=0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 1.0 (+) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -0.0 (/) --=-=-= Content-Type: text/plain Hi, While checking the full python-science collection build state I've faced with fenics-dolfin not building for a long time; upstream introduced a fresh fork: <https://bitbucket.org/fenics-project/dolfin> -> <https://github.com/FEniCS/dolfinx> which might need some packaging efforts to bring it in. I've fixed the build of python-fenics-fiat, but fenics-dolfin still failes to build. --8<---------------cut here---------------start------------->8--- Generation 86 Mar 20 2025 08:00:04 (current) guix 77ff73a repository URL: https://git.savannah.gnu.org/git/guix.git branch: master commit: 77ff73a920759437639e8eb77601e51409fefefa guix refresh --list-dependent fenics-dolfin Building the following 2 packages would ensure 3 dependent packages are rebuilt: python-vedo@HIDDEN python-dolfin-adjoint@HIDDEN --8<---------------cut here---------------end--------------->8--- CC everytone paticipated in <https://issues.guix.gnu.org/33059> -- Oleg --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEmEeB3micIcJkGAhndtcnv/Ys0rUFAmffUCoWHHNoYXJsYXRh bnVzQGdtYWlsLmNvbQAKCRB21ye/9izStTSREACCU34B6m+ZdRYe9+UjUaIJ+rnO 81JF/HGEBkDPVZMlpMenf3UcUAvoAuxEXBXiB0eWIUvYiODk+Ge6y1NH7yedE65i x3/w/0r2W0ZGToBl0CnYbTtmDlkXr+sozQpXugm2mNYHJXopNQ93qqUUV+jXF3T0 KgjLK9Woa3Va5D9RKMUuB7yDNRh162+Fh8W8WzYWRaTDPeeiybUTJv6Cs3FQHPGb zs5LVwmQPbSRLVfoSPox2gMl/p+fCOgEqyTzW5UheodAOG7Q+VfXCIgrroBSuT7u fYp+cmUgoV+9zxZrmjn5g1eY1VcnTOSBA+p8YjfuluAoZRicUo9HmqLJZ4Jv+J6Q 6saC4YydFHPOJ+6IX+sx3fU8YG+bBAnYEQbVjnGHXBSoOexRiKsp/bmtRpBbpwQ3 TtDAkO0yH0yQ72UY6qlvKOX2jQsQjpcNec13vd56hRwv8hqVs+v8xjM0d6TpYyiK QUvmMoyEFOnOujk6kLrqIDLF9nOdznu+D+DfroF5ei9AeUeitHS3Rl5s59DReLuf nBhqEAeSCvc+9JRiEG0vflMFw1UPrEXKISpDLvsuJ4sWYq7GJraZ+T9r4b0Br41L JmgCtJBtxXD8Wc/0vxjo0m47tORHrT0uBRoCxhOHJRs/UKh8kZjDVOW4k47G6fKP FaSrB0H5LLcsi1rH/A== =ps1e -----END PGP SIGNATURE----- --=-=-=--
Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) Content-Type: text/plain; charset=utf-8 X-Loop: help-debbugs@HIDDEN From: help-debbugs@HIDDEN (GNU bug Tracking System) To: Sharlatan Hellseher <sharlatanus@HIDDEN> Subject: bug#77195: Acknowledgement (fenics-dolfin@HIDDEN: Fails to build, deprecated upstream.) Message-ID: <handler.77195.B.174268832721847.ack <at> debbugs.gnu.org> References: <875xk07gt1.fsf@HIDDEN> X-Gnu-PR-Message: ack 77195 X-Gnu-PR-Package: guix Reply-To: 77195 <at> debbugs.gnu.org Date: Sun, 23 Mar 2025 00:06:02 +0000 Thank you for filing a new bug report with debbugs.gnu.org. This is an automatically generated reply to let you know your message has been received. Your message is being forwarded to the package maintainers and other interested parties for their attention; they will reply in due course. Your message has been sent to the package maintainer(s): bug-guix@HIDDEN If you wish to submit further information on this problem, please send it to 77195 <at> debbugs.gnu.org. Please do not send mail to help-debbugs@HIDDEN unless you wish to report a problem with the Bug-tracking system. --=20 77195: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D77195 GNU Bug Tracking System Contact help-debbugs@HIDDEN with problems
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: fenics-dolfin@HIDDEN: Fails to build, deprecated upstream. Resent-From: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 20:32:01 +0000 Resent-Message-ID: <handler.77195.B77195.17434531103204 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Sharlatan Hellseher <sharlatanus@HIDDEN> Cc: Andreas Enge <andreas@HIDDEN>, pgarlick@HIDDEN, 77195 <at> debbugs.gnu.org, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.17434531103204 (code B ref 77195); Mon, 31 Mar 2025 20:32:01 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 20:31:50 +0000 Received: from localhost ([127.0.0.1]:43099 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzLnS-0000pb-5h for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 16:31:50 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:60550) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <ludo@HIDDEN>) id 1tzLnQ-0000oz-Db for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 16:31:48 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <ludo@HIDDEN>) id 1tzLnJ-0003Sn-A8; Mon, 31 Mar 2025 16:31:41 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=uQpfDwXb2dZ+CAH8zakeHZM7Ocx3n5YA9Vqgwp8KAsc=; b=KYfFiAU2n1UlpV5CD5rm P/y0YhJ8oAqd6Cy2n06t1rm5KbQ3aGHiIPUJw5Cu8ZnZM63yifiAsONiavqG4oGIHZghfoAupXqnC 1ieDE3mqmb6X3xBHhElW/hfi0vO6Nh8MmQ/+lRwx7BH1dDHY1mDRF9/SBLy0fQWV4BesX3813nkWc NcG8VlN6T/300TUxdQP5DQ4dHTQbeiNDp/Cp4cMiGIU0v0r4szLubqHR4IE5Zo05BQWWrhjmFtUKo AzBWwiHlwynrGC7TFWej25PokiQi9sASwtSRW4Zwj+mrq7ly7PAhLQIKIq3/a0y4LtDhQ55oZcH3K OvvbHMZnLXJR6g==; From: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> In-Reply-To: <875xk07gt1.fsf@HIDDEN> (Sharlatan Hellseher's message of "Sun, 23 Mar 2025 00:04:58 +0000") References: <875xk07gt1.fsf@HIDDEN> Date: Mon, 31 Mar 2025 22:31:36 +0200 Message-ID: <87ecydj61j.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -3.3 (---) Hi Oleg, Sharlatan Hellseher <sharlatanus@HIDDEN> skribis: > While checking the full python-science collection build state I've faced > with fenics-dolfin not building for a long time; upstream introduced a > fresh fork: <https://bitbucket.org/fenics-project/dolfin> -> > <https://github.com/FEniCS/dolfinx> which might need some packaging > efforts to bring it in. > > I've fixed the build of python-fenics-fiat, but fenics-dolfin still > failes to build. (Cc: Andreas, who stumbled upon this build failure today.) I think we can remove =E2=80=98fenics-dolfin=E2=80=99 in accordance with th= e deprecation policy. Ludo=E2=80=99.
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 0/7] Remove fenics References: <875xk07gt1.fsf@HIDDEN> In-Reply-To: <875xk07gt1.fsf@HIDDEN> Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:03 +0000 Resent-Message-ID: <handler.77195.B77195.174345799626655 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345799626655 (code B ref 77195); Mon, 31 Mar 2025 21:54:03 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:53:16 +0000 Received: from localhost ([127.0.0.1]:43229 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4F-0006vn-6E for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:15 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:50350) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4B-0006uy-S5 for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:13 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 2D629373; Mon, 31 Mar 2025 23:53:05 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id UclIRO995f9C; Mon, 31 Mar 2025 23:53:04 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 981F6203; Mon, 31 Mar 2025 23:53:03 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:49 +0200 Message-ID: <cover.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 2D629373 X-Spamd-Result: default: False [8.40 / 15.00]; SPAM_FLAG(5.00)[]; BAYES_HAM(-3.00)[99.99%]; NEURAL_SPAM(3.00)[1.000]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; FROM_EQ_ENVFROM(0.00)[]; RCVD_COUNT_TWO(0.00)[2]; MIME_TRACE(0.00)[0:+]; RCVD_TLS_ALL(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FROM_HAS_DN(0.00)[]; TO_DN_SOME(0.00)[]; ARC_NA(0.00)[] X-Spam-Level: ******** X-Rspamd-Action: add header X-Spamd-Bar: ++++++++ X-Rspamd-Server: hera X-Spam: Yes X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) Indeed, comments in our source code say that the fenics project has been dormant for three years now. I think fenics-dolfin has not built for months, probably years. So I suppose that nobody actually uses the fenics packages in Guix, and I would suggest to remove them all on or after May 1st. Patch series following. PS: Indeed, years ago. See here: https://issues.guix.gnu.org/57143 Andreas Enge (7): gnu: Remove python-dolfin-adjoint. gnu: Remove fenics. gnu: Remove fenics-dolfin. gnu: Remove python-fenics-ffc. gnu: Remove python-fenics-dijitso. gnu: Remove python-fenics-ufl. gnu: Remove python-fenics-fiat. gnu/packages/simulation.scm | 576 ------------------------------------ 1 file changed, 576 deletions(-) base-commit: 5ef3295c8fd8af9beda6f1f30a899044951cda0c -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 1/7] gnu: Remove python-dolfin-adjoint. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:04 +0000 Resent-Message-ID: <handler.77195.B77195.174345800826760 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345800826760 (code B ref 77195); Mon, 31 Mar 2025 21:54:04 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:53:28 +0000 Received: from localhost ([127.0.0.1]:43231 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4F-0006vs-OL for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:28 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:50362) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4C-0006v0-IL for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:14 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id A3456EC; Mon, 31 Mar 2025 23:53:06 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id vY2BPBMVILF5; Mon, 31 Mar 2025 23:53:05 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id F3F7F28D; Mon, 31 Mar 2025 23:53:04 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:50 +0200 Message-ID: <51ab569ed3a942bc785ec3aa7cdbed6ea2426a7e.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: A3456EC X-Spamd-Result: default: False [-6.36 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.76)[-0.919]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (python-dolfin-adjoint): Delete variable. Change-Id: Ia2bec142747a44a74cf35145838c9c5d440a8a4b --- gnu/packages/simulation.scm | 92 ------------------------------------- 1 file changed, 92 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index ebfe477265..161e6a85d4 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -1187,98 +1187,6 @@ (define-public python-pygmsh command-line utility for mesh optimisation.") (license license:gpl3+))) -(define-public python-dolfin-adjoint - (package - (name "python-dolfin-adjoint") - (version "2019.1.0") - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/dolfin-adjoint/pyadjoint") - (commit version))) - (file-name (git-file-name name version)) - (sha256 - (base32 "0xhy76a5f33hz94wc9g2mc5qmwkxfccbbc6yxl7psm130afp8lhn")) - (modules '((guix build utils))) - (snippet - '(begin - ;; One of the migration tests attempts to call openmpi - ;; recursively and fails. See - ;; https://bitbucket.org/mpi4py/mpi4py/issues/95. Run the - ;; test sequentially instead. - (with-directory-excursion "tests/migration/optimal_control_mms" - (substitute* "test_optimal_control_mms.py" - (("\\\"mpirun\\\", \\\"-n\\\", \\\"2\\\", ") ""))) - ;; Result files are regenerated in the check phase. - (delete-file-recursively - "tests/migration/viscoelasticity/test-results"))))) - (build-system pyproject-build-system) - (arguments - (list - #:test-flags - #~(list - ;; Ignore tests which require missing packages and/or failed during - ;; tests collection. - "--ignore=tests/firedrake_adjoint/test_assignment.py" - "--ignore=tests/firedrake_adjoint/test_burgers_newton.py" - "--ignore=tests/firedrake_adjoint/test_dynamic_meshes.py" - "--ignore=tests/firedrake_adjoint/test_hessian.py" - "--ignore=tests/firedrake_adjoint/test_reduced_functional.py" - "--ignore=tests/firedrake_adjoint/test_shape_derivatives.py" - "--ignore=tests/firedrake_adjoint/test_solving.py" - "--ignore=tests/firedrake_adjoint/test_tlm.py" - "--ignore=tests/migration/burgers_newton/test_burgers_newton.py" - "--ignore=tests/migration/linear_solver/test_linear_solver.py" - "--ignore=tests/migration/optimization_scipy/test_optimization_scipy.py" - "--ignore=tests/migration/projection/test_projection.py" - "--ignore=tests/migration/reduced_functional/test_reduced_functional.py" - "--ignore=tests/migration/split/test_split.py" - "-k" (string-append "not test_read_checkpoint" - " and not test_krylov_solver_preconditioner_function_ctrl")) - #:phases - #~(modify-phases %standard-phases - (add-after 'build 'mpi-setup #$%openmpi-setup) - (add-before 'check 'set-environment-variables - (lambda _ - (setenv "HOME" (getcwd)))) - (add-after 'install 'install-doc - (lambda _ - (let* ((doc (string-append #$output "/share/doc/" #$name "-" #$version)) - (examples (string-append doc "/examples"))) - (mkdir-p examples) - (copy-recursively "examples" examples)))) - ;; Remove 'sanity-check, because it tries to import - ;; firedrake_adjoint after importing fenics_adjoint. - ;; Both load a module named 'backend' and firedrake_adjoint - ;; fails with an ImportError if it sees that the backend module - ;; has already been loaded. - (delete 'sanity-check)))) - (inputs - (list fenics openmpi pybind11)) - (native-inputs - (list pkg-config - python-coverage - python-decorator - python-flake8 - python-pkgconfig - python-pytest)) - (propagated-inputs - (list python-scipy)) - (home-page "https://www.dolfin-adjoint.org") - (synopsis "Automatic differentiation library") - (description - "@code{python-dolfin-adjoint} is a solver of differential equations -associated with a governing system and a functional of interest. Working from -the forward model the solver automatically derives the discrete adjoint and -tangent linear models. These additional models are key ingredients in many -algorithms such as data assimilation, optimal control, sensitivity analysis, -design optimisation and error estimation. The dolfin-adjoint project provides -the necessary tools and data structures for cases where the forward model is -implemented in @code{fenics} or -@url{https://firedrakeproject.org,firedrake}.") - (license license:lgpl3))) - (define %commonroad-dont-install-license-at-root #~(substitute* "setup.py" (("data_files=\\[\\('.', \\['LICENSE.txt'\\]\\)\\],") -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 3/7] gnu: Remove fenics-dolfin. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:05 +0000 Resent-Message-ID: <handler.77195.B77195.174345803326893 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345803326893 (code B ref 77195); Mon, 31 Mar 2025 21:54:05 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:53:53 +0000 Received: from localhost ([127.0.0.1]:43238 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4p-0006zX-Ly for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:53 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54354) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4F-0006vI-Tr for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:18 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 0136449E; Mon, 31 Mar 2025 23:53:10 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id 4j31tFl4bDSO; Mon, 31 Mar 2025 23:53:09 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 1609F28D; Mon, 31 Mar 2025 23:53:08 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:52 +0200 Message-ID: <7abe2b63db81f8d42546cec483c41c3835fc91e2.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 0136449E X-Spamd-Result: default: False [-6.24 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.64)[-0.880]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (fenics-dolfin): Delete variable. Change-Id: If3eed285af25544a2369afecd6c525b160804d78 --- gnu/packages/simulation.scm | 170 ------------------------------------ 1 file changed, 170 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index 102cbf8977..c5345c934f 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -739,176 +739,6 @@ (define-public python-fenics-ffc ;; ufc.h and ufc_geometry.h, in subdirectory 'ffc/backends/ufc'. (license (list license:public-domain license:lgpl3+)))) -(define-public fenics-dolfin - (package - (name "fenics-dolfin") - (version "2019.1.0.post0") - (source - (origin - (method url-fetch) - (uri (string-append - "https://bitbucket.org/fenics-project/dolfin/get/" - version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) - (sha256 - (base32 - "1m91hwcq5gfj4qqswp8l8kj58nia48f0n4kq13w0xqj4biq7rla0")) - (patches (search-patches "fenics-dolfin-algorithm.patch" - "fenics-dolfin-demo-init.patch" - "fenics-dolfin-boost.patch" - "fenics-dolfin-config-slepc.patch")) - (modules '((guix build utils))) - (snippet - '(begin - ;; Make sure we don't use the bundled test framework. - (delete-file-recursively "test/unit/cpp/catch") - (substitute* "test/unit/cpp/main.cpp" - ;; Use standard search paths for 'catch' header file. - (("#include.*") - "#include <catch.hpp>\n")) - (substitute* "test/unit/cpp/CMakeLists.txt" - ;; Specify directory to find the header file. - (("(^set\\(CATCH_INCLUDE_DIR ).*(/catch\\))" _ front back) - (string-append front - "$ENV{CATCH_DIR}/include" back "\n"))))))) - (build-system cmake-build-system) - (inputs - (list openblas - boost - eigen - hdf5-parallel-openmpi - libxml2 - openmpi - python-3 - pt-scotch32 - suitesparse - sundials-openmpi - zlib)) - (native-inputs - (list catch-framework pkg-config)) - (propagated-inputs - (list python-fenics-ffc petsc-openmpi slepc-openmpi)) - (arguments - (list #:configure-flags #~`("-DDOLFIN_ENABLE_DOCS:BOOL=OFF" - "-DDOLFIN_ENABLE_HDF5:BOOL=ON" - "-DDOLFIN_ENABLE_MPI:BOOL=ON" - "-DDOLFIN_ENABLE_PARMETIS:BOOL=OFF" - "-DDOLFIN_ENABLE_SCOTCH:BOOL=ON" - "-DDOLFIN_ENABLE_SUNDIALS:BOOL=ON" - "-DDOLFIN_ENABLE_TRILINOS:BOOL=OFF") - #:phases - #~(modify-phases %standard-phases - (add-after 'patch-usr-bin-file 'mpi-setup - #$%openmpi-setup) - (add-after 'patch-source-shebangs 'set-paths - (lambda _ - ;; Define paths to store locations. - (setenv "BLAS_DIR" - #$(this-package-input "openblas")) - (setenv "CATCH_DIR" - #$(this-package-input "catch")) - (setenv "LAPACK_DIR" - #$(this-package-input "openblas")) - (setenv "PETSC_DIR" - #$(this-package-input "petsc")) - (setenv "SLEPC_DIR" - #$(this-package-input "slepc")) - (setenv "SCOTCH_DIR" - #$(this-package-input "scotch")) - (setenv "SUNDIALS_DIR" - #$(this-package-input "sundials")) - (setenv "UMFPACK_DIR" - #$(this-package-input "suitesparse")))) - (add-before 'check 'pre-check - (lambda _ - ;; The Dolfin repository uses git-lfs, whereby web links are - ;; substituted for large files. Guix does not currently support - ;; git-lfs, so only the links are downloaded. The tests that - ;; require the absent meshes cannot run and are skipped. - ;; - ;; One serial test fails and is skipped. - ;; i) demo_multimesh-stokes_serial: - ;; Warning: Found no facets matching domain for boundary - ;; condition. - ;; - ;; One mpi test fails and is skipped. - ;; i) demo_stokes-iterative_mpi: - ;; The MPI_Comm_rank() function was called before MPI_INIT was - ;; invoked - (call-with-output-file "CTestCustom.cmake" - (lambda (port) - (display (string-append - "set(CTEST_CUSTOM_TESTS_IGNORE " - "demo_bcs_serial " - "demo_bcs_mpi " - "demo_eigenvalue_serial " - "demo_eigenvalue_mpi " - "demo_navier-stokes_serial " - "demo_navier-stokes_mpi " - "demo_stokes-taylor-hood_serial " - "demo_stokes-taylor-hood_mpi " - "demo_subdomains_serial " - "demo_advection-diffusion_serial " - "demo_advection-diffusion_mpi " - "demo_auto-adaptive-navier-stokes_serial " - "demo_contact-vi-snes_serial " - "demo_contact-vi-snes_mpi " - "demo_contact-vi-tao_serial " - "demo_contact-vi-tao_mpi " - "demo_curl-curl_serial " - "demo_curl-curl_mpi " - "demo_dg-advection-diffusion_serial " - "demo_dg-advection-diffusion_mpi " - "demo_elasticity_serial " - "demo_elasticity_mpi " - "demo_elastodynamics_serial " - "demo_elastodynamics_mpi " - "demo_lift-drag_serial " - "demo_lift-drag_mpi " - "demo_mesh-quality_serial " - "demo_mesh-quality_mpi " - "demo_multimesh-stokes_serial " - ")\n") port))))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "make" "unittests") - (invoke "make" "demos") - (invoke "ctest" "-R" "unittests") - (invoke "ctest" "-R" "demo" "-R" "serial") - (invoke "ctest" "-R" "demo" "-R" "mpi"))))))) - (home-page "https://bitbucket.org/fenics-project/dolfin/") - (synopsis "Problem solving environment for differential equations") - (description - "DOLFIN is a computational framework for finding numerical -solutions to problems described by differential equations. Numerical -models in DOLFIN are constructed using general families of finite -elements. Data structures are provided for discretizing the governing -system on a computational mesh. A compact syntax, similar to -mathematical notation, is made available for defining function spaces -and expressing variational forms. Interfaces to specialized matrix -solvers are provided for solving the resultant linear systems. - -@code{fenics-dolfin} is part of the FEniCS project. It is the C++ -user interface to the FEniCS core components and external libraries.") - ;; The source code for the DOLFIN C++ library is licensed under the - ;; GNU Lesser General Public License, version 3 or later, with the - ;; following exceptions: - ;; - ;; public-domain: dolfin/geometry/predicates.cpp - ;; dolfin/geometry/predicates.h - ;; - ;; zlib: dolfin/io/base64.cpp - ;; dolfin/io/base64.h - ;; - ;; expat: dolfin/io/pugiconfig.hpp - ;; dolfin/io/pugixml.cpp - ;; dolfin/io/pugixml.hpp - (license (list license:public-domain - license:zlib - license:expat - license:lgpl3+)))) - (define-public fullswof-2d (let ((revision 505) (release "1.09.01")) -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 5/7] gnu: Remove python-fenics-dijitso. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:05 +0000 Resent-Message-ID: <handler.77195.B77195.174345803526912 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345803526912 (code B ref 77195); Mon, 31 Mar 2025 21:54:05 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:53:55 +0000 Received: from localhost ([127.0.0.1]:43240 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4r-0006zi-HO for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:54 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54380) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4I-0006vX-Te for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:20 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 6C9C04D6; Mon, 31 Mar 2025 23:53:12 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id 7QxFHSZKt9OH; Mon, 31 Mar 2025 23:53:11 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 0677D28D; Mon, 31 Mar 2025 23:53:10 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:54 +0200 Message-ID: <8b4d6e5ab721d6bb2adb3c4bbd87893f4001ea05.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 6C9C04D6 X-Spamd-Result: default: False [-6.44 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.84)[-0.945]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (python-fenics-dijitso): Delete variable. Change-Id: Ie0b071dd08b7185d37044a1d4941c71793e16b8c --- gnu/packages/simulation.scm | 50 ------------------------------------- 1 file changed, 50 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index 5aef3da133..b32bf997df 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -554,56 +554,6 @@ (define-public esmini some support for generating and analysing traffic scenarios..") (license license:mpl2.0))) -(define-public python-fenics-dijitso - (package - (name "python-fenics-dijitso") - (version "2019.1.0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "fenics-dijitso" version)) - (sha256 - (base32 "0lhqsq8ypdak0ahr2jnyvg07yrqp6wicjxi6k56zx24wp3qg60sc")))) - (build-system pyproject-build-system) - (arguments - (list - #:phases - #~(modify-phases %standard-phases - (add-after 'build 'mpi-setup - #$%openmpi-setup) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (setenv "HOME" "/tmp") - (with-directory-excursion "test" - ;; Disable parallel tests to avoid race condition. See - ;; https://github.com/pytest-dev/pytest-cov/issues/237. - (substitute* "runtests.sh" - (("for p in 1 4 8 16; do") "for p in 1; do")) - (invoke "./runtests.sh")))))))) - (native-inputs - (list python-pytest - python-pytest-cov - python-setuptools - python-wheel)) - (inputs - (list openmpi python-numpy)) - (propagated-inputs - (list python-mpi4py)) - (home-page "https://bitbucket.org/fenics-project/dijitso/") - (synopsis "Distributed just-in-time building of shared libraries") - (description - "Dijitso provides a core component of the @code{FEniCS} framework, -namely the just-in-time compilation of C++ code that is generated from -Python modules. It is called from within a C++ library, using ctypes -to import the dynamic shared library directly. - -As long as the compiled code can provide a simple factory function to -a class implementing a predefined C++ interface, there is no limit to -the complexity of that interface. Parallel support depends on the -@code{mpi4py} interface.") - (license license:lgpl3+))) - (define-public python-fenics-ufl (package (name "python-fenics-ufl") -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 2/7] gnu: Remove fenics. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:06 +0000 Resent-Message-ID: <handler.77195.B77195.174345803826937 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345803826937 (code B ref 77195); Mon, 31 Mar 2025 21:54:06 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:53:58 +0000 Received: from localhost ([127.0.0.1]:43242 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4t-000701-CH for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:58 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:50378) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4E-0006v6-Ii for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:16 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 8903647C; Mon, 31 Mar 2025 23:53:08 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id gBV3ev5C31iY; Mon, 31 Mar 2025 23:53:07 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 692F0203; Mon, 31 Mar 2025 23:53:06 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:51 +0200 Message-ID: <4024c93ef561c41cd528f63d46c0be4c700e26f5.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 8903647C X-Spamd-Result: default: False [-6.14 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.54)[-0.846]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (fenics): Delete variable. Change-Id: I3d34832d935c2a6ebcd6ec71e6e9a7167a0a59f6 --- gnu/packages/simulation.scm | 129 ------------------------------------ 1 file changed, 129 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index 161e6a85d4..102cbf8977 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -909,135 +909,6 @@ (define-public fenics-dolfin license:expat license:lgpl3+)))) -(define-public fenics - (package/inherit fenics-dolfin - (name "fenics") - (build-system python-build-system) - (inputs - (modify-inputs (package-inputs fenics-dolfin) - (delete "python") - (prepend pybind11 python-matplotlib))) - (native-inputs - (modify-inputs (package-native-inputs fenics-dolfin) - (prepend cmake-minimal python-ply python-pytest python-decorator))) - (propagated-inputs - (list fenics-dolfin - python-petsc4py - python-slepc4py - - ;; 'dolfin/jit/jit.py' parses 'dolfin.pc' at run time. - python-pkgconfig)) - (arguments - (list #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'relax-requirements - (lambda _ - (substitute* "python/setup.py" - (("pybind11==") - "pybind11>=")))) - (add-after 'unpack 'set-dolfin-pc-file-name - (lambda* (#:key inputs #:allow-other-keys) - ;; Instead of cluttering the user's 'PKG_CONFIG_PATH' environment - ;; variable, hard-code the 'dolfin.pc' absolute file name. - (let ((pc-file (search-input-file inputs - "/lib/pkgconfig/dolfin.pc"))) - (substitute* "python/dolfin/jit/jit.py" - (("pkgconfig\\.parse\\(\"dolfin\"\\)") - (string-append "pkgconfig.parse(\"" pc-file - "\")")))))) - (add-after 'patch-source-shebangs 'set-paths - (lambda _ - ;; Define paths to store locations. - (setenv "PYBIND11_DIR" #$(this-package-input "pybind11")) - ;; Move to python sub-directory. - (chdir "python"))) - (add-after 'build 'mpi-setup - #$%openmpi-setup) - (add-before 'check 'pre-check - (lambda _ - ;; Exclude three tests that generate - ;; 'NotImplementedError' in matplotlib version 3.1.2. - ;; See - ;; <https://github.com/matplotlib/matplotlib/issues/15382>. - ;; Also exclude tests that require meshes supplied by - ;; git-lfs. - (substitute* "demo/test.py" - (("(.*stem !.*)" line) - (string-append line - "\n" - "excludeList = [\n" - "'built-in-meshes', \n" - "'hyperelasticity', \n" - "'elasticity', \n" - "'multimesh-quadrature', \n" - "'multimesh-marking', \n" - "'mixed-poisson-sphere', \n" - "'mesh-quality', \n" - "'lift-drag', \n" - "'elastodynamics', \n" - "'dg-advection-diffusion', \n" - "'curl-curl', \n" - "'contact-vi-tao', \n" - "'contact-vi-snes', \n" - "'collision-detection', \n" - "'buckling-tao', \n" - "'auto-adaptive-navier-stokes', \n" - "'advection-diffusion', \n" - "'subdomains', \n" - "'stokes-taylor-hood', \n" - "'stokes-mini', \n" - "'navier-stokes', \n" - "'eigenvalue']\n" - "demos = [" - "d for d in demos if d[0].stem not in " - "excludeList]\n"))) - (setenv "HOME" - (getcwd)) - ;; Restrict OpenBLAS to MPI-only in preference to MPI+OpenMP. - (setenv "OPENBLAS_NUM_THREADS" "1"))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (with-directory-excursion "test" - (invoke "pytest" - "unit" - ;; The test test_snes_set_from_options() in the file - ;; unit/nls/test_PETScSNES_solver.py fails and is ignored. - "--ignore" - "unit/nls/test_PETScSNES_solver.py" - ;; Fails with a segfault. - "--ignore" - "unit/io/test_XDMF.py"))))) - (add-after 'install 'install-demo-files - (lambda* (#:key outputs #:allow-other-keys) - (let* ((demos (string-append (assoc-ref outputs "out") - "/share/python-dolfin/demo"))) - (mkdir-p demos) - (with-directory-excursion "demo" - (for-each (lambda (file) - (let* ((dir (dirname file)) - (tgt-dir (string-append - demos "/" dir))) - (unless (equal? "." dir) - (mkdir-p tgt-dir) - (install-file file tgt-dir)))) - (find-files "." ".*\\.(py|gz|xdmf)$"))))))))) - (home-page "https://fenicsproject.org/") - (synopsis "High-level environment for solving differential equations") - (description - "@code{fenics} is a computing platform for solving general classes of -problems that involve differential equations. @code{fenics} facilitates -access to efficient methods for dealing with ordinary differential -equations (ODEs) and partial differential equations (PDEs). Systems of -equations such as these are commonly encountered in areas of engineering, -mathematics and the physical sciences. It is particularly well-suited to -problems that can be solved using the Finite Element Method (FEM). - -@code{fenics} is the top level of the set of packages that are developed -within the FEniCS project. It provides the python user interface to the -FEniCS core components and external libraries.") - (license license:lgpl3+))) - (define-public fullswof-2d (let ((revision 505) (release "1.09.01")) -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 4/7] gnu: Remove python-fenics-ffc. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:07 +0000 Resent-Message-ID: <handler.77195.B77195.174345804026955 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345804026955 (code B ref 77195); Mon, 31 Mar 2025 21:54:07 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:54:00 +0000 Received: from localhost ([127.0.0.1]:43244 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4w-00070R-8U for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:59 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54364) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4G-0006vM-Tr for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:18 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 08B644A9; Mon, 31 Mar 2025 23:53:11 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id eMhN-puu_7sL; Mon, 31 Mar 2025 23:53:10 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 71E53203; Mon, 31 Mar 2025 23:53:09 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:53 +0200 Message-ID: <4f2c58ff29c0a7e7a70add864684551f0d2f1a55.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 08B644A9 X-Spamd-Result: default: False [-6.52 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.92)[-0.973]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (python-fenics-ffc): Delete variable. Change-Id: I4308e0e9a7232e320988962bd7a908f7c9d01a47 --- gnu/packages/simulation.scm | 48 ------------------------------------- 1 file changed, 48 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index c5345c934f..5aef3da133 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -691,54 +691,6 @@ (define-public python-fenics-fiat FIAT is part of the FEniCS Project.") (license license:lgpl3+))) -(define-public python-fenics-ffc - (package - (name "python-fenics-ffc") - (version "2019.1.0.post0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "fenics-ffc" version)) - (sha256 - (base32 - "1f2a44ha65fg3a1prrbrsz4dgvibsv0j5c3pi2m52zi93bhwwgg9")))) - (build-system python-build-system) - (native-inputs - (list python-pytest)) - (propagated-inputs - (list python-fenics-dijitso python-fenics-fiat python-fenics-ufl)) - (arguments - '(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ - (setenv "HOME" (getcwd)) - (with-directory-excursion "test" - ;; FIXME: the tests in subdirectory - ;; 'unit/ufc/finite_element' require the ffc_factory - ;; extension module. This module, located in the 'libs' - ;; subdirectory, needs to be built and made accessible - ;; prior to running the tests. - (invoke "py.test" "unit/" "--ignore=unit/ufc/") - (with-directory-excursion "uflacs" - (invoke "py.test" "unit/"))) - #t))))) - (home-page "https://bitbucket.org/fenics-project/ffc/") - (synopsis "Compiler for finite element variational forms") - (description "The FEniCS Form Compiler (FFC) is a compiler for -finite element variational forms. From a high-level description of -the form, it generates efficient low-level C++ code that can be used -to assemble the corresponding discrete operator (tensor). In -particular, a bilinear form may be assembled into a matrix and a -linear form may be assembled into a vector. FFC may be used either -from the command line (by invoking the @code{ffc} command) or as a -Python module (@code{import ffc}). - -FFC is part of the FEniCS Project.") - ;; There are two files released with a public domain licence; - ;; ufc.h and ufc_geometry.h, in subdirectory 'ffc/backends/ufc'. - (license (list license:public-domain license:lgpl3+)))) - (define-public fullswof-2d (let ((revision 505) (release "1.09.01")) -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 6/7] gnu: Remove python-fenics-ufl. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:08 +0000 Resent-Message-ID: <handler.77195.B77195.174345804126967 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345804126967 (code B ref 77195); Mon, 31 Mar 2025 21:54:08 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:54:01 +0000 Received: from localhost ([127.0.0.1]:43246 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4y-00070n-6S for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:54:01 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54386) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4K-0006vl-7h for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:21 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id F2A2E28D; Mon, 31 Mar 2025 23:53:13 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id FQfPEy3Yab18; Mon, 31 Mar 2025 23:53:13 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 5551D203; Mon, 31 Mar 2025 23:53:12 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:55 +0200 Message-ID: <acb529982d3e91d12a360aaea6170920c3c37c13.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: F2A2E28D X-Spamd-Result: default: False [-6.48 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.88)[-0.959]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (python-fenics-ufl): Delete variable. Change-Id: Ib80ed4ef5789e5815537731b828c492919bff697 --- gnu/packages/simulation.scm | 34 ---------------------------------- 1 file changed, 34 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index b32bf997df..ce38f30c04 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -554,40 +554,6 @@ (define-public esmini some support for generating and analysing traffic scenarios..") (license license:mpl2.0))) -(define-public python-fenics-ufl - (package - (name "python-fenics-ufl") - (version "2019.1.0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "fenics-ufl" version)) - (sha256 - (base32 - "10dz8x3lm68x2w3kkqcjask38h0zkhhak26jdbkppr8g9y8wny7p")))) - (build-system python-build-system) - (inputs - (list python-numpy)) - (native-inputs - (list python-pytest)) - (arguments - '(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ - (invoke "py.test" "test")))))) - (home-page "https://bitbucket.org/fenics-project/ufl/") - (synopsis "Unified language for form-compilers") - (description "The Unified Form Language (UFL) is a domain specific -language for declaration of finite element discretizations of -variational forms. More precisely, it defines a flexible interface -for choosing finite element spaces and defining expressions for weak -forms in a notation close to mathematical notation. - -UFL is part of the FEniCS Project.") - (license license:lgpl3+))) - - ;; XXX: This package is quite dated and upstream no longer maintains it: "This ;; repository was archived by the owner on Feb 21, 2022. It is now read-only." ;; <https://bitbucket.org/fenics-project/fiat> -> -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 7/7] gnu: Remove python-fenics-fiat. Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Mon, 31 Mar 2025 21:54:10 +0000 Resent-Message-ID: <handler.77195.B77195.174345804326982 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: 77195 <at> debbugs.gnu.org Cc: ludo@HIDDEN, sharlatanus@HIDDEN, pgarlick@HIDDEN, Andreas Enge <andreas@HIDDEN>, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174345804326982 (code B ref 77195); Mon, 31 Mar 2025 21:54:10 +0000 Received: (at 77195) by debbugs.gnu.org; 31 Mar 2025 21:54:03 +0000 Received: from localhost ([127.0.0.1]:43248 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzN4z-00070u-E5 for submit <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:54:02 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54400) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzN4M-0006w8-QW for 77195 <at> debbugs.gnu.org; Mon, 31 Mar 2025 17:53:24 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id C9D0847C; Mon, 31 Mar 2025 23:53:16 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id Dzh8K74Rx5xB; Mon, 31 Mar 2025 23:53:15 +0200 (CEST) Received: from jurong.lan (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 3A3F9373; Mon, 31 Mar 2025 23:53:14 +0200 (CEST) From: Andreas Enge <andreas@HIDDEN> Date: Mon, 31 Mar 2025 23:52:56 +0200 Message-ID: <64ac89ea7f014448e90451157d16ee5b4778780b.1743457476.git.andreas@HIDDEN> X-Mailer: git-send-email 2.49.0 In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> References: <cover.1743457476.git.andreas@HIDDEN> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: C9D0847C X-Spamd-Result: default: False [-6.40 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[100.00%]; NEURAL_HAM(-2.80)[-0.932]; FORGED_RECIPIENTS(2.00)[m:andreas@HIDDEN,s:andreas.enge@HIDDEN]; MID_CONTAINS_FROM(1.00)[]; R_MISSING_CHARSET(0.50)[]; MIME_GOOD(-0.10)[text/plain]; MIME_TRACE(0.00)[0:+]; RCVD_COUNT_TWO(0.00)[2]; RCVD_TLS_ALL(0.00)[]; FROM_EQ_ENVFROM(0.00)[]; RCPT_COUNT_FIVE(0.00)[6]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_SOME(0.00)[]; FREEMAIL_CC(0.00)[gmail.com,tourbillion-technology.com,flashner.co.il,gnu.org,enge.fr]; TO_DN_SOME(0.00)[]; FROM_HAS_DN(0.00)[]; ARC_NA(0.00)[] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) * gnu/packages/simulation.scm (python-fenics-fiat): Delete variable. Change-Id: I7f2d5b11aeff850718327112e206b54c973e9d4e --- gnu/packages/simulation.scm | 53 ------------------------------------- 1 file changed, 53 deletions(-) diff --git a/gnu/packages/simulation.scm b/gnu/packages/simulation.scm index ce38f30c04..b540ee1919 100644 --- a/gnu/packages/simulation.scm +++ b/gnu/packages/simulation.scm @@ -554,59 +554,6 @@ (define-public esmini some support for generating and analysing traffic scenarios..") (license license:mpl2.0))) -;; XXX: This package is quite dated and upstream no longer maintains it: "This -;; repository was archived by the owner on Feb 21, 2022. It is now read-only." -;; <https://bitbucket.org/fenics-project/fiat> -> -;; <https://github.com/FEniCS/fiat> while providing a new refactored fork -;; <https://github.com/firedrakeproject/fiat>. -(define-public python-fenics-fiat - (package - (name "python-fenics-fiat") - (version "2019.1.0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "fenics-fiat" version)) - (sha256 - (base32 "13sc7lma3d2mh43an7i4kkdbbk4cmvxjk45wi43xnjd7qc38zg4b")))) - (build-system pyproject-build-system) - (arguments - (list - #:test-flags - #~(list - ;; FIXME: three FIAT test modules are known to fail with recent - ;; versions of pytest (>= 4). These are skipped for FIAT version - ;; 2019.1.0 pending an upstream pull request. For details see request - ;; #59 at https://bitbucket.org/fenics-project/fiat/. - "--ignore=test/regression/" - "--ignore=test/unit/test_quadrature.py" - "--ignore=test/unit/test_reference_element.py" - "-k" (string-join - (list "not test_nodality" - "test_basis_values") - " and not ")))) - (native-inputs - (list python-pytest - python-setuptools - python-wheel)) - (propagated-inputs - (list python-numpy - python-sympy)) - (home-page "https://bitbucket.org/fenics-project/fiat/") - (synopsis "Tabulation of finite element function spaces") - (description - "The FInite element Automatic Tabulator (FIAT) supports generation of -arbitrary order instances of the Lagrange elements on lines, triangles, and -tetrahedra. It is also capable of generating arbitrary order instances of -Jacobi-type quadrature rules on the same element shapes. Further, H(div) and -H(curl) conforming finite element spaces such as the families of -Raviart-Thomas, Brezzi-Douglas-Marini and Nedelec are supported on triangles -and tetrahedra. Upcoming versions will also support Hermite and nonconforming -elements. - -FIAT is part of the FEniCS Project.") - (license license:lgpl3+))) - (define-public fullswof-2d (let ((revision 505) (release "1.09.01")) -- 2.49.0
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 0/7] Remove fenics Resent-From: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Tue, 01 Apr 2025 12:35:03 +0000 Resent-Message-ID: <handler.77195.B77195.174351085314938 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Andreas Enge <andreas@HIDDEN> Cc: sharlatanus@HIDDEN, pgarlick@HIDDEN, 77195 <at> debbugs.gnu.org, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174351085314938 (code B ref 77195); Tue, 01 Apr 2025 12:35:03 +0000 Received: (at 77195) by debbugs.gnu.org; 1 Apr 2025 12:34:13 +0000 Received: from localhost ([127.0.0.1]:46958 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzaol-0003sZ-8d for submit <at> debbugs.gnu.org; Tue, 01 Apr 2025 08:34:13 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:57718) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <ludo@HIDDEN>) id 1tzaog-0003qL-3R for 77195 <at> debbugs.gnu.org; Tue, 01 Apr 2025 08:34:07 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <ludo@HIDDEN>) id 1tzaoY-0002xc-O7; Tue, 01 Apr 2025 08:33:58 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=FyvX6m/OJykr5tdCIeGkUWGA+0liVKphD9GKmO7d7Ts=; b=PgaLQGM3KvrWVuwQa0jU ldD7khX9tyl/0EzN3cbTZ4x8ojQGFeo5bBkDYfNIlZC6bMmCa6B6y2SCm2dW2amUHKI2xfiTtZ5Rw 8D/FNtUcUHn/Xwjzc2qycoKTSB57KcT/sGWXnB9JQkdk2zCrbxhwsAHtdtmB3+siVhmM/0j3NYfkk v7SzMWzmOuG/e3/xloc7c6dP3wqmZkxVm/b3oSsFrDSVi1ZDkUvPRQSjyPvCiQBN8Rffs/aedTxCD Xxr/73tntfrQoNO/SjZg72Ypozuu5JOpb+4G/YfHCNlLM0soslPLBujvpG54pyQwCR53XspZQrzQ2 AZ489AUsJVoG5A==; From: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> In-Reply-To: <cover.1743457476.git.andreas@HIDDEN> (Andreas Enge's message of "Mon, 31 Mar 2025 23:52:49 +0200") References: <cover.1743457476.git.andreas@HIDDEN> X-URL: http://www.fdn.fr/~lcourtes/ X-Revolutionary-Date: Duodi 12 Germinal an 233 de la =?UTF-8?Q?R=C3=A9volution,?= jour du Charme X-PGP-Key-ID: 0x090B11993D9AEBB5 X-PGP-Key: http://www.fdn.fr/~lcourtes/ludovic.asc X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu Date: Tue, 01 Apr 2025 14:33:24 +0200 Message-ID: <87friscb8r.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -3.3 (---) Hi, Andreas Enge <andreas@HIDDEN> skribis: > Indeed, comments in our source code say that the fenics project has been > dormant for three years now. I think fenics-dolfin has not built for > months, probably years. So I suppose that nobody actually uses the > fenics packages in Guix, and I would suggest to remove them all on or > after May 1st. Patch series following. My understanding of <https://issues.guix.gnu.org/77195> is that only =E2=80=98fenics-dolfin=E2=80=99 fails to build, so perhaps we could limit t= o this one package? No strong opinion though. Ludo=E2=80=99.
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 0/7] Remove fenics Resent-From: Sharlatan Hellseher <sharlatanus@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Tue, 01 Apr 2025 12:49:04 +0000 Resent-Message-ID: <handler.77195.B77195.174351173125208 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Cc: Andreas Enge <andreas@HIDDEN>, pgarlick@HIDDEN, 77195 <at> debbugs.gnu.org, Efraim Flashner <efraim@HIDDEN> Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174351173125208 (code B ref 77195); Tue, 01 Apr 2025 12:49:04 +0000 Received: (at 77195) by debbugs.gnu.org; 1 Apr 2025 12:48:51 +0000 Received: from localhost ([127.0.0.1]:47005 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzb2v-0006YH-4Y for submit <at> debbugs.gnu.org; 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charset="UTF-8" Content-Transfer-Encoding: quoted-printable <div dir=3D"auto"><div>The project is still alive but distracted from other= sources now</div><div dir=3D"auto">=C2=A0(listed above), I think we may sa= crifice deprecated variant and will</div><div dir=3D"auto">=C2=A0check how = to bring a maintained version. No strong opinion to</div><div dir=3D"auto">= keep still working ones or delete them.</div><div><br></div><div data-smart= mail=3D"gmail_signature"><div dir=3D"ltr">VCS: <a href=3D"https://github.in= certo.xyz/" target=3D"_blank">https://github.incerto.xyz/</a>;=C2=A0<a href= =3D"https://git.sr.ht/~hellseher/" target=3D"_blank">https://git.sr.ht/~hel= lseher/</a><br>GPG: 9847 81DE 689C 21C2 6418 0867 76D7 27BF F62C D2B5<br><b= r>=E2=80=A6 =D0=BD=D0=B0=D1=88 =D1=80=D0=B0=D0=B7=D1=83=D0=BC - =D0=BF=D1= =80=D0=B5=D0=B2=D0=BE=D1=81=D1=85=D0=BE=D0=B4=D0=BD=D0=B0=D1=8F =D0=BE=D0= =B1=D1=8A=D1=8F=D1=81=D0=BD=D0=B8=D1=82=D0=B5=D0=BB=D1=8C=D0=BD=D0=B0=D1=8F= =D0=BC=D0=B0=D1=88=D0=B8=D0=BD=D0=B0 =D0=BA=D0=BE=D1=82=D0=BE=D1=80=D0=B0= =D1=8F =D1=81=D0=BF=D0=BE=D1=81=D0=BE=D0=B1=D0=BD=D0=B0 =D0=BD=D0=B0=D0=B9= =D1=82=D0=B8 =D1=81=D0=BC=D1=8B=D1=81=D0=BB =D0=BF=D0=BE=D1=87=D1=82=D0=B8 = =D0=B2 =D1=87=D0=B5=D0=BC =D1=83=D0=B3=D0=BE=D0=B4=D0=BD=D0=BE, =D0=B8=D1= =81=D1=82=D0=BE=D0=BB=D0=BA=D0=BE=D0=B2=D0=B0=D1=82=D1=8C =D0=BB=D1=8E=D0= =B1=D0=BE=D0=B9 =D1=84=D0=B5=D0=BD=D0=BE=D0=BC=D0=B5=D0=BD, =D0=BD=D0=BE = =D1=81=D0=BE=D0=B2=D0=B5=D1=80=D1=88=D0=B5=D0=BD=D0=BD=D0=BE =D0=BD=D0=B5 = =D0=B2 =D1=81=D0=BE=D1=81=D1=82=D0=BE=D1=8F=D0=BD=D0=B8=D0=B8 =D0=BF=D1=80= =D0=B8=D0=BD=D1=8F=D1=82=D1=8C =D0=BC=D1=8B=D1=81=D0=BB=D1=8C =D0=BE =D0=BD= =D0=B5=D0=BF=D1=80=D0=B5=D0=B4=D1=81=D0=BA=D0=B0=D0=B7=D1=83=D0=B5=D0=BC=D0= =BE=D1=81=D1=82=D0=B8.<br></div></div></div><br><div class=3D"gmail_quote g= mail_quote_container"><div dir=3D"ltr" class=3D"gmail_attr">On Tue, 1 Apr 2= 025, 13:34 Ludovic Court=C3=A8s, <<a href=3D"mailto:ludo@HIDDEN">ludo@g= nu.org</a>> wrote:<br></div><blockquote class=3D"gmail_quote" style=3D"m= argin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left= :1ex">Hi,<br> <br> Andreas Enge <<a href=3D"mailto:andreas@HIDDEN" target=3D"_blank" rel= =3D"noreferrer">andreas@HIDDEN</a>> skribis:<br> <br> > Indeed, comments in our source code say that the fenics project has be= en<br> > dormant for three years now. I think fenics-dolfin has not built for<b= r> > months, probably years. So I suppose that nobody actually uses the<br> > fenics packages in Guix, and I would suggest to remove them all on or<= br> > after May 1st. Patch series following.<br> <br> My understanding of <<a href=3D"https://issues.guix.gnu.org/77195" rel= =3D"noreferrer noreferrer" target=3D"_blank">https://issues.guix.gnu.org/77= 195</a>> is that only<br> =E2=80=98fenics-dolfin=E2=80=99 fails to build, so perhaps we could limit t= o this one<br> package?<br> <br> No strong opinion though.<br> <br> Ludo=E2=80=99.<br> </blockquote></div> --0000000000008fe74c0631b6f406--
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 0/7] Remove fenics Resent-From: Andreas Enge <andreas@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Tue, 01 Apr 2025 13:55:08 +0000 Resent-Message-ID: <handler.77195.B77195.1743515685836 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Cc: sharlatanus@HIDDEN, pgarlick@HIDDEN, 77195 <at> debbugs.gnu.org, efraim@HIDDEN Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.1743515685836 (code B ref 77195); Tue, 01 Apr 2025 13:55:08 +0000 Received: (at 77195) by debbugs.gnu.org; 1 Apr 2025 13:54:45 +0000 Received: from localhost ([127.0.0.1]:47204 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzc4g-0000D3-5M for submit <at> debbugs.gnu.org; Tue, 01 Apr 2025 09:54:44 -0400 Received: from hera.aquilenet.fr ([185.233.100.1]:54984) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <andreas@HIDDEN>) id 1tzc4W-0000B9-Is for 77195 <at> debbugs.gnu.org; Tue, 01 Apr 2025 09:54:37 -0400 Received: from localhost (localhost [127.0.0.1]) by hera.aquilenet.fr (Postfix) with ESMTP id 5E1A42EB; Tue, 1 Apr 2025 15:54:26 +0200 (CEST) Authentication-Results: hera.aquilenet.fr; none X-Virus-Scanned: Debian amavis at hera.aquilenet.fr Received: from hera.aquilenet.fr ([127.0.0.1]) by localhost (hera.aquilenet.fr [127.0.0.1]) (amavis, port 10024) with ESMTP id BIqrOZkPswXs; Tue, 1 Apr 2025 15:54:25 +0200 (CEST) Received: from jurong (176-179-191-150.abo.bbox.fr [176.179.191.150]) by hera.aquilenet.fr (Postfix) with ESMTPSA id 30A4716F; Tue, 1 Apr 2025 15:54:25 +0200 (CEST) Date: Tue, 1 Apr 2025 15:54:23 +0200 From: Andreas Enge <andreas@HIDDEN> Message-ID: <Z-vwD_gqjQeOxqyA@jurong> References: <cover.1743457476.git.andreas@HIDDEN> <87friscb8r.fsf@HIDDEN> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Disposition: inline Content-Transfer-Encoding: 8bit In-Reply-To: <87friscb8r.fsf@HIDDEN> X-Rspamd-Queue-Id: 5E1A42EB X-Spamd-Result: default: False [-6.60 / 15.00]; REPLY(-4.00)[]; BAYES_HAM(-3.00)[99.99%]; MID_RHS_NOT_FQDN(0.50)[]; MIME_GOOD(-0.10)[text/plain]; FROM_EQ_ENVFROM(0.00)[]; MIME_TRACE(0.00)[0:+]; RCVD_TLS_ALL(0.00)[]; RCVD_COUNT_TWO(0.00)[2]; RCPT_COUNT_FIVE(0.00)[5]; ARC_NA(0.00)[]; FREEMAIL_ENVRCPT(0.00)[gmail.com]; RCVD_VIA_SMTP_AUTH(0.00)[]; TO_MATCH_ENVRCPT_ALL(0.00)[]; FROM_HAS_DN(0.00)[]; TO_DN_SOME(0.00)[]; FREEMAIL_CC(0.00)[debbugs.gnu.org, gmail.com, tourbillion-technology.com, flashner.co.il] X-Rspamd-Action: no action X-Spamd-Bar: ------ X-Rspamd-Server: hera X-Spam-Score: 0.0 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) Am Tue, Apr 01, 2025 at 02:33:24PM +0200 schrieb Ludovic Courtès: > My understanding of <https://issues.guix.gnu.org/77195> is that only > ‘fenics-dolfin’ fails to build, so perhaps we could limit to this one > package? > No strong opinion though. Me neither. I tend to rather the other side, why should we keep a package that is outdated and that probably nobody uses anymore, but that uses project resources (builds; people trying to fix it when it potentially stops building, which is bound to happen with unmaintained software)? So I would drop them all unless someone speaks up who uses any of them (or knows someone else who does). Andreas
X-Loop: help-debbugs@HIDDEN Subject: bug#77195: [PATCH 0/7] Remove fenics Resent-From: Paul Garlick <pgarlick@HIDDEN> Original-Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> Resent-CC: bug-guix@HIDDEN Resent-Date: Wed, 02 Apr 2025 14:32:02 +0000 Resent-Message-ID: <handler.77195.B77195.174360430431198 <at> debbugs.gnu.org> Resent-Sender: help-debbugs@HIDDEN X-GNU-PR-Message: followup 77195 X-GNU-PR-Package: guix X-GNU-PR-Keywords: To: Andreas Enge <andreas@HIDDEN>, Ludovic =?UTF-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Cc: sharlatanus@HIDDEN, efraim@HIDDEN, 77195 <at> debbugs.gnu.org Received: via spool by 77195-submit <at> debbugs.gnu.org id=B77195.174360430431198 (code B ref 77195); Wed, 02 Apr 2025 14:32:02 +0000 Received: (at 77195) by debbugs.gnu.org; 2 Apr 2025 14:31:44 +0000 Received: from localhost ([127.0.0.1]:58741 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1tzz84-000878-7m for submit <at> debbugs.gnu.org; Wed, 02 Apr 2025 10:31:44 -0400 Received: from smtp.hosts.co.uk ([85.233.160.19]:31846) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <pgarlick@HIDDEN>) id 1tzz7x-00086N-2u for 77195 <at> debbugs.gnu.org; Wed, 02 Apr 2025 10:31:40 -0400 Received: from maikeh336.claranet.co.uk ([79.123.23.187] helo=[192.168.0.13]) by smtp.hosts.co.uk with esmtpsa (TLS1.3:TLS_AES_256_GCM_SHA384:256) (Exim) (envelope-from <pgarlick@HIDDEN>) id 1tzz7q-0000000025o-836R; Wed, 02 Apr 2025 15:31:31 +0100 Message-ID: <669abface2382501812bfc4d5a59415488099915.camel@HIDDEN> From: Paul Garlick <pgarlick@HIDDEN> Date: Wed, 02 Apr 2025 15:31:29 +0100 In-Reply-To: <Z-vwD_gqjQeOxqyA@jurong> References: <cover.1743457476.git.andreas@HIDDEN> <87friscb8r.fsf@HIDDEN> <Z-vwD_gqjQeOxqyA@jurong> Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable User-Agent: Evolution 3.46.4-2 MIME-Version: 1.0 X-Spam-Score: -0.7 (/) X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.7 (-) Hi Guix, Thank you for the notification that fenics-dolfin is not currently building. It has been a while :-) but I plan to resume maintaining the fenics packages in Guix by the end of this month. A quick look at the build log for fenics-dolfin suggests that the problem is VTK-related; possibly a new VTK version containing an updated function. In terms of the upstream project, fenicsx will replace fenics. It has currently reached version 0.9; the production version may be released later this year. I intend to package fenicsx for Guix, including its new dependencies.=20 Ideally, the fenicsx and fenics packages would co-exist for a period, Best regards, Paul. On Tue, 2025-04-01 at 15:54 +0200, Andreas Enge wrote: > Am Tue, Apr 01, 2025 at 02:33:24PM +0200 schrieb Ludovic Court=C3=A8s: > > My understanding of <https://issues.guix.gnu.org/77195> is that > > only > > =E2=80=98fenics-dolfin=E2=80=99 fails to build, so perhaps we could lim= it to this > > one > > package? > > No strong opinion though. >=20 > Me neither. I tend to rather the other side, why should we keep a > package that is outdated and that probably nobody uses anymore, but > that uses project resources (builds; people trying to fix it when it > potentially stops building, which is bound to happen with > unmaintained > software)? >=20 > So I would drop them all unless someone speaks up who uses any of > them > (or knows someone else who does). >=20 > Andreas >=20
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